| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787796
Identifier: 91787796
GI number: 91787796
Start: 1978192
End: 1980090
Strand: Direct
Name: 91787796
Synonym: Bpro_1919
Alternate gene names: NA
Gene position: 1978192-1980090 (Clockwise)
Preceding gene: 91787795
Following gene: 91787797
Centisome position: 38.04
GC content: 60.24
Gene sequence:
>1899_bases ATGCCCCCATCAGCCAGCAGGGGTCAGTGCTGGTCTGTACTAACTGGAGAAAAAATGTTTGATGAAGTTAATGCCATGCC CATGAATGAAGTTGATTCTTTGATTTCCCCTGTATCTGCCATGGAGGTTGAAGATTCAGTCGCGCCAACCGCAGCCACCA TGAAGGAATCTTTGCATGATGCTGGTCATGCCTTTCTTGCGCGGGCTGAGAAAACCGACGAAAGCGACCATGCCGATACT GGCTCCGACGCCACTGTTGATCCCGCCATCGGAGGCGATGCCGGTGCTGATCCAGTTTTTGACATCAAGGATGACCGGCC CATCGTCCACTATAGAACGGGCTACATCCGGAAGGCGCTCGCGGACGCCGAAAGGCACCTGGCTCAAACAGGCAGTTACT TCCAGCGTAGTGGCGCAATCGTGGCAGTTCGGACAGATCCTGCAACAGGGGAGACCGGGGTGCATGATCTCTCCCAGCCC GCATTAGCGCACGCTCTTAATGGGGTGGCCTCCTGGAGGCGGTTCAACCAGGCGAAGGGCACCTGGACGATGGACGATGC CCCGGACCGGATCTGCAACCTCCTGCTCAAGACGGGCGTCTACGGGCATCTGCCCGTATTGGCCGGCCTGGTGCGTCAGC CCTACCTGCGCCCGGACGGTTCCATCTGCGTTGCGTCAGGCCACGACCCGGCTACAGGCTTGTACGGGGTGTTCGAGCCC ACGAAGTTCAGTGTTCCCGATCATCCGACCCGTGAACAGGCCGAGCAGGCCGTGGCGCTGCTGGCGGAGCTGGTGAACGA GTTCGCCTTTGCTTCGGAACACGATCGAAGCGCAGCCTTGGCTGCCATGCTGACGGCCGCGGTGCGACCGAGTCTGAGGC TGGCGCCGATGTTTCATGTCCGGGCGCCGCAGATCTCAGCGGGGAAGAGCTTTTTGTGCGCACTGGTCACTGCCTTTGCG ACGTCCAGCCCGGGGCAGCCGGTCGGGTTTCCCGTGAGCGACGAAGAATGCACCAAGCTGCTGCTTGCGGAACTGGTGCG CGCGCCCGCGGTCATTGAGTTTGATAACCTGACCTCCGATCTCAAACCATTCAAATCTCTTTGCACCGCCTTGACCAGTG AACGCATGCAGGGCCGGGTTCTTGGCAAGTCGCGGATGTTGGGAGTGAGCACCCGGGTGTTGCTGCTAAGCAGCGGGAAC AATGTTGGCCCGACAGCCGACATGACGCGCCGCTGCATCACGATCAACCTTGATCCGGGCTGCGAAACGCCGGCCACACG CTCGTTTCGACGGCCCAATCTGGTCGCCGATGTGATCAAGGACCGTGAGCGCTACGTTAGCGCGGCGCTCACCGTTGTAC GGGCGTGGGTCGACGCTGGGCGGCCGATGTCAGCTTGTCAGTCGATAGCGAGCTTTGGTGAATGGTCAGACTTGTGCCGC CAGCCACTGCTTTGGCTCGGGCGTCCCGATCCGGCACATGCTGTCTTTGAGGGTATGGCCAATGATCCTGACCGGGAGCT GCTCGGGCGCGTCTTGGCTGGCTGGCATGCACACTTCGGCAGTAAACCAATGCTTGTGCGTGAAGTCGTGACTCGAACGT CCGCCGGTGGACTTGGATCGGGCCTGGAGGATTTTTACGAGTCGCTACTTGATATTGCTGGAGAACGCGAGCGGGTCAAT ACACGCAAGCTCGGCAAGTGGATCACCCGTAACGCCGGGCGGATCGTGGATGGGCTTCGGTTGGTAAGGGCTCCCAAGAC GCGAAACGCCGAGAACTGGCTTGTCGAGTCGGTTAAGTCGGTTGTGTCGGTCCCTTCCGTGGCTAAGGCACCGAGCGAGG ATCCGCATGACCATTCGGCTGAAGCCTCAGCCTCCTGTGAACTGTCCAGCCTAGGCTAG
Upstream 100 bases:
>100_bases CCTTCCATATCAGTTTTGTATTTCGCTGCCTCGCTGCATACGAGGCGGTGGGGCTGTGTTCGTTCAATTGAAGCAGCTCG TCGCCCTCCGGGTCGACTTT
Downstream 100 bases:
>100_bases CATGGCCTACCCTACGCTGGCATGGTCCAGGGTAGGGTAGGGCAGCGCAGCATGGCGCAGCACATCACAGCACAGCACAG CACAGCACAGCACAGCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MPPSASRGQCWSVLTGEKMFDEVNAMPMNEVDSLISPVSAMEVEDSVAPTAATMKESLHDAGHAFLARAEKTDESDHADT GSDATVDPAIGGDAGADPVFDIKDDRPIVHYRTGYIRKALADAERHLAQTGSYFQRSGAIVAVRTDPATGETGVHDLSQP ALAHALNGVASWRRFNQAKGTWTMDDAPDRICNLLLKTGVYGHLPVLAGLVRQPYLRPDGSICVASGHDPATGLYGVFEP TKFSVPDHPTREQAEQAVALLAELVNEFAFASEHDRSAALAAMLTAAVRPSLRLAPMFHVRAPQISAGKSFLCALVTAFA TSSPGQPVGFPVSDEECTKLLLAELVRAPAVIEFDNLTSDLKPFKSLCTALTSERMQGRVLGKSRMLGVSTRVLLLSSGN NVGPTADMTRRCITINLDPGCETPATRSFRRPNLVADVIKDRERYVSAALTVVRAWVDAGRPMSACQSIASFGEWSDLCR QPLLWLGRPDPAHAVFEGMANDPDRELLGRVLAGWHAHFGSKPMLVREVVTRTSAGGLGSGLEDFYESLLDIAGERERVN TRKLGKWITRNAGRIVDGLRLVRAPKTRNAENWLVESVKSVVSVPSVAKAPSEDPHDHSAEASASCELSSLG
Sequences:
>Translated_632_residues MPPSASRGQCWSVLTGEKMFDEVNAMPMNEVDSLISPVSAMEVEDSVAPTAATMKESLHDAGHAFLARAEKTDESDHADT GSDATVDPAIGGDAGADPVFDIKDDRPIVHYRTGYIRKALADAERHLAQTGSYFQRSGAIVAVRTDPATGETGVHDLSQP ALAHALNGVASWRRFNQAKGTWTMDDAPDRICNLLLKTGVYGHLPVLAGLVRQPYLRPDGSICVASGHDPATGLYGVFEP TKFSVPDHPTREQAEQAVALLAELVNEFAFASEHDRSAALAAMLTAAVRPSLRLAPMFHVRAPQISAGKSFLCALVTAFA TSSPGQPVGFPVSDEECTKLLLAELVRAPAVIEFDNLTSDLKPFKSLCTALTSERMQGRVLGKSRMLGVSTRVLLLSSGN NVGPTADMTRRCITINLDPGCETPATRSFRRPNLVADVIKDRERYVSAALTVVRAWVDAGRPMSACQSIASFGEWSDLCR QPLLWLGRPDPAHAVFEGMANDPDRELLGRVLAGWHAHFGSKPMLVREVVTRTSAGGLGSGLEDFYESLLDIAGERERVN TRKLGKWITRNAGRIVDGLRLVRAPKTRNAENWLVESVKSVVSVPSVAKAPSEDPHDHSAEASASCELSSLG >Mature_631_residues PPSASRGQCWSVLTGEKMFDEVNAMPMNEVDSLISPVSAMEVEDSVAPTAATMKESLHDAGHAFLARAEKTDESDHADTG SDATVDPAIGGDAGADPVFDIKDDRPIVHYRTGYIRKALADAERHLAQTGSYFQRSGAIVAVRTDPATGETGVHDLSQPA LAHALNGVASWRRFNQAKGTWTMDDAPDRICNLLLKTGVYGHLPVLAGLVRQPYLRPDGSICVASGHDPATGLYGVFEPT KFSVPDHPTREQAEQAVALLAELVNEFAFASEHDRSAALAAMLTAAVRPSLRLAPMFHVRAPQISAGKSFLCALVTAFAT SSPGQPVGFPVSDEECTKLLLAELVRAPAVIEFDNLTSDLKPFKSLCTALTSERMQGRVLGKSRMLGVSTRVLLLSSGNN VGPTADMTRRCITINLDPGCETPATRSFRRPNLVADVIKDRERYVSAALTVVRAWVDAGRPMSACQSIASFGEWSDLCRQ PLLWLGRPDPAHAVFEGMANDPDRELLGRVLAGWHAHFGSKPMLVREVVTRTSAGGLGSGLEDFYESLLDIAGERERVNT RKLGKWITRNAGRIVDGLRLVRAPKTRNAENWLVESVKSVVSVPSVAKAPSEDPHDHSAEASASCELSSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68002; Mature: 67870
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSASRGQCWSVLTGEKMFDEVNAMPMNEVDSLISPVSAMEVEDSVAPTAATMKESLHD CCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH AGHAFLARAEKTDESDHADTGSDATVDPAIGGDAGADPVFDIKDDRPIVHYRTGYIRKAL HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEEECHHHHHHHH ADAERHLAQTGSYFQRSGAIVAVRTDPATGETGVHDLSQPALAHALNGVASWRRFNQAKG HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TWTMDDAPDRICNLLLKTGVYGHLPVLAGLVRQPYLRPDGSICVASGHDPATGLYGVFEP CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC TKFSVPDHPTREQAEQAVALLAELVNEFAFASEHDRSAALAAMLTAAVRPSLRLAPMFHV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEE RAPQISAGKSFLCALVTAFATSSPGQPVGFPVSDEECTKLLLAELVRAPAVIEFDNLTSD CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHH LKPFKSLCTALTSERMQGRVLGKSRMLGVSTRVLLLSSGNNVGPTADMTRRCITINLDPG HHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEEEECCCCCCCCHHHCCEEEEEECCCC CETPATRSFRRPNLVADVIKDRERYVSAALTVVRAWVDAGRPMSACQSIASFGEWSDLCR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH QPLLWLGRPDPAHAVFEGMANDPDRELLGRVLAGWHAHFGSKPMLVREVVTRTSAGGLGS CCHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC GLEDFYESLLDIAGERERVNTRKLGKWITRNAGRIVDGLRLVRAPKTRNAENWLVESVKS CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVSVPSVAKAPSEDPHDHSAEASASCELSSLG HHCCCHHHCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure PPSASRGQCWSVLTGEKMFDEVNAMPMNEVDSLISPVSAMEVEDSVAPTAATMKESLHD CCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH AGHAFLARAEKTDESDHADTGSDATVDPAIGGDAGADPVFDIKDDRPIVHYRTGYIRKAL HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCEEEECHHHHHHHH ADAERHLAQTGSYFQRSGAIVAVRTDPATGETGVHDLSQPALAHALNGVASWRRFNQAKG HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TWTMDDAPDRICNLLLKTGVYGHLPVLAGLVRQPYLRPDGSICVASGHDPATGLYGVFEP CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC TKFSVPDHPTREQAEQAVALLAELVNEFAFASEHDRSAALAAMLTAAVRPSLRLAPMFHV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEE RAPQISAGKSFLCALVTAFATSSPGQPVGFPVSDEECTKLLLAELVRAPAVIEFDNLTSD CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHH LKPFKSLCTALTSERMQGRVLGKSRMLGVSTRVLLLSSGNNVGPTADMTRRCITINLDPG HHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEEEECCCCCCCCHHHCCEEEEEECCCC CETPATRSFRRPNLVADVIKDRERYVSAALTVVRAWVDAGRPMSACQSIASFGEWSDLCR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH QPLLWLGRPDPAHAVFEGMANDPDRELLGRVLAGWHAHFGSKPMLVREVVTRTSAGGLGS CCHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC GLEDFYESLLDIAGERERVNTRKLGKWITRNAGRIVDGLRLVRAPKTRNAENWLVESVKS CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVSVPSVAKAPSEDPHDHSAEASASCELSSLG HHCCCHHHCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA