| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787797
Identifier: 91787797
GI number: 91787797
Start: 1980142
End: 1981101
Strand: Direct
Name: 91787797
Synonym: Bpro_1920
Alternate gene names: NA
Gene position: 1980142-1981101 (Clockwise)
Preceding gene: 91787796
Following gene: 91787799
Centisome position: 38.08
GC content: 59.79
Gene sequence:
>960_bases ATGGCGCAGCACATCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCATGGG CCAAGGTAGGGTAGCAGCGGCGGACGCATTCCGGGGAAACCTGGAGGCACACAGAGCCCGAAGTGCCGAGTCGGTTATGT CGGTTATGTCGATTGCGTCGGTGTCGGCTGATGCTCTTTTGCCTACTGACGAGGGAACGGTCGGAATCTGCTCCTCTCCT CGTCTTATGGCACGCCCGGCTATGCTTGCGCTTATGAACGCAAATCAGTCGGGACCAACGAACCAAAAGCCGACGGGGCC GCCAGACCTTGAAAGAACGGTCCGGCGATCCGTAGAGCTTGAGCAGGCGGTGTGGGCCATCTTGCGGCCGGAGTCTTACC AGGTCTTCGATGATTCCGACCGAATAGCGGCGAGCTTCAATGCGTGCGAGGTCGCCATCCAGCACGGCCAGGCCCTTAGG GCGCTGATGTCGGAAGGCTTTCACACCACGGCGGCATCGGTGATGCGGCTTCAATTTGAAGTGCTTGTTCGGGCGATGTG GCTGCTCTACGCCGCCGATGAGGTCGAAATCGCCAAGATTCACGCACCTCTTACCCAGGAAGCTGAGCACGCCGCGAGCA AGTTGCCCATGGTCAGCGCGATGATCAAGGCGTTGGACGGGAGGGCACCGCCCCCGGCTTTTCAGATGGTCGATCAGTTC AAGACCACGATGCTGGGGGCGTTGAACTCGTTCGTGCATGGCGGCATCCATCCCCTGAAGCGGCATCAAACTGGGTATCC AGAGCAGATCATGGATCAAATCCTCCGCAGCTCGAATGGCCTCTTCACGATGACCGCCATGATGCTGGCCATCCTGTCGG GCGATGAATCCGTCAGCCGACCCATGCGGACGATCCAGCCCGCTTTCGCCGACTGCTTGCCCGACCTTTTACGGCATTAG
Upstream 100 bases:
>100_bases CCATTCGGCTGAAGCCTCAGCCTCCTGTGAACTGTCCAGCCTAGGCTAGCATGGCCTACCCTACGCTGGCATGGTCCAGG GTAGGGTAGGGCAGCGCAGC
Downstream 100 bases:
>100_bases GCTCGTCCCCTCTTCTGCGGGCCGATGCGGATATCAAAGTGACTGCCGCAATTAGATACGGGGGTATCAATTGATGAAGG CGATGCAGATACTGTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAQHITAQHSTAQHSTAQHSTAQHSMGQGRVAAADAFRGNLEAHRARSAESVMSVMSIASVSADALLPTDEGTVGICSSP RLMARPAMLALMNANQSGPTNQKPTGPPDLERTVRRSVELEQAVWAILRPESYQVFDDSDRIAASFNACEVAIQHGQALR ALMSEGFHTTAASVMRLQFEVLVRAMWLLYAADEVEIAKIHAPLTQEAEHAASKLPMVSAMIKALDGRAPPPAFQMVDQF KTTMLGALNSFVHGGIHPLKRHQTGYPEQIMDQILRSSNGLFTMTAMMLAILSGDESVSRPMRTIQPAFADCLPDLLRH
Sequences:
>Translated_319_residues MAQHITAQHSTAQHSTAQHSTAQHSMGQGRVAAADAFRGNLEAHRARSAESVMSVMSIASVSADALLPTDEGTVGICSSP RLMARPAMLALMNANQSGPTNQKPTGPPDLERTVRRSVELEQAVWAILRPESYQVFDDSDRIAASFNACEVAIQHGQALR ALMSEGFHTTAASVMRLQFEVLVRAMWLLYAADEVEIAKIHAPLTQEAEHAASKLPMVSAMIKALDGRAPPPAFQMVDQF KTTMLGALNSFVHGGIHPLKRHQTGYPEQIMDQILRSSNGLFTMTAMMLAILSGDESVSRPMRTIQPAFADCLPDLLRH >Mature_318_residues AQHITAQHSTAQHSTAQHSTAQHSMGQGRVAAADAFRGNLEAHRARSAESVMSVMSIASVSADALLPTDEGTVGICSSPR LMARPAMLALMNANQSGPTNQKPTGPPDLERTVRRSVELEQAVWAILRPESYQVFDDSDRIAASFNACEVAIQHGQALRA LMSEGFHTTAASVMRLQFEVLVRAMWLLYAADEVEIAKIHAPLTQEAEHAASKLPMVSAMIKALDGRAPPPAFQMVDQFK TTMLGALNSFVHGGIHPLKRHQTGYPEQIMDQILRSSNGLFTMTAMMLAILSGDESVSRPMRTIQPAFADCLPDLLRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34644; Mature: 34513
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHITAQHSTAQHSTAQHSTAQHSMGQGRVAAADAFRGNLEAHRARSAESVMSVMSIAS CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VSADALLPTDEGTVGICSSPRLMARPAMLALMNANQSGPTNQKPTGPPDLERTVRRSVEL HCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EQAVWAILRPESYQVFDDSDRIAASFNACEVAIQHGQALRALMSEGFHTTAASVMRLQFE HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VLVRAMWLLYAADEVEIAKIHAPLTQEAEHAASKLPMVSAMIKALDGRAPPPAFQMVDQF HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHH KTTMLGALNSFVHGGIHPLKRHQTGYPEQIMDQILRSSNGLFTMTAMMLAILSGDESVSR HHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH PMRTIQPAFADCLPDLLRH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQHITAQHSTAQHSTAQHSTAQHSMGQGRVAAADAFRGNLEAHRARSAESVMSVMSIAS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VSADALLPTDEGTVGICSSPRLMARPAMLALMNANQSGPTNQKPTGPPDLERTVRRSVEL HCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EQAVWAILRPESYQVFDDSDRIAASFNACEVAIQHGQALRALMSEGFHTTAASVMRLQFE HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VLVRAMWLLYAADEVEIAKIHAPLTQEAEHAASKLPMVSAMIKALDGRAPPPAFQMVDQF HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHH KTTMLGALNSFVHGGIHPLKRHQTGYPEQIMDQILRSSNGLFTMTAMMLAILSGDESVSR HHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH PMRTIQPAFADCLPDLLRH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA