| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pht2 [H]
Identifier: 91787788
GI number: 91787788
Start: 1968775
End: 1969830
Strand: Reverse
Name: pht2 [H]
Synonym: Bpro_1909
Alternate gene names: 91787788
Gene position: 1969830-1968775 (Counterclockwise)
Preceding gene: 91787793
Following gene: 91787787
Centisome position: 37.88
GC content: 61.84
Gene sequence:
>1056_bases GTGCCTAAGATTATTCGCGATTTCCGGATTTGTCAAGACTGTTTACGAAAGGCCACGATGAGCGTTAACCCTGACGTCAC CGCAAGCGCGGGCGGCACACCGGCCGAGCCGGATTTTTTCAATCTCAAGGTCGTGCGCAAGGAAGCCGTGGCGCAAGGCA TTTACCTGTTCGAATTGGGCCATCCGGAGGGTCTGGATTTGCCGGCTTTCACCGCCGGGTCACACCTCACCGTTCAGGTG CCCAATGGCGCCCGGCGAAACTACTCCCTGTGCAGCGACCCGGCCGACACTGGCTGCTACCAGATTGCCGTCAAGCGCGA CGCTGCAGGCCGGGGCGGCTCTATCAGCATGGCCGACGATGTGCAGGTGGGCCAGTTATTGGCGGTCAGCGCTCCGCGCA ACAATTTTGAGTTGCACCCGCGGGCCTCCAGCTTTCTGTTCATTGCCGGTGGCATCGGCATCACGCCGGTTTTGTCCATG ATGCGGCATCTCAAAAGGCAGGGGCGCAACCCCTTCAAGCTGATCTACTGCACCCGGGACGCTGACAGCACGGCGTTTGT GCAAGAGCTGACCGGGCCCGAATTCGCGGCTCACGTCCAGTTGCACCATACCCAAGGCGATGCCAGCCAGGCCCTGGACT TGTGGCCTGTGTTCGAGACGCCCGGCTCCGCACATGTGTATTGCTGCGGTCCGCGCGGCCTGATGGACGCCGTGGCCGAC ATGTCGGGCCACTGGCCATCCGGCTCGATCCACTTCGAGAGTTTTGGCGTGGATGCCAGCACCTATGCGGCCGACACCGC GTTCACCGTGCGCCTGCATAAGACCGGCATCAATGTGCCGGTGGACGCGGGGCAAACCATTTTGCAGGCGCTGCGGGCCT GCGGCCATCATGTGAGCAGTTCGTGTGAAAGCGGCACCTGCGGATCCTGCCGCACCACACTGCTGGCGGGCGAGGCCGAA CACCGGGACATGGTCTTGAGTGACGACGACAAGACGCACCAGATCATGGTCTGCGTGTCGCGCGCAAAATCTGCCGAACT CGTACTGGACTTATGA
Upstream 100 bases:
>100_bases TTCAAAGGTCAACATTTCAAATTTCCTCAAGTCAATTGACTGACGTCAACTAAAAACCAAAAAACCGCTTGCAAACTCCG GTCAGGGAGATTATTCTTAG
Downstream 100 bases:
>100_bases AAAAGCGCCCCCTGCAAATCGGCATCGTCGGGCTGGGCCGGGCTTTTACGCTCATGCTGCCCACGTTTGTGCAAGACAGC CGCGTCAGGCTGGTGGCTGC
Product: phthalate 4,5-dioxygenase, reductase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPKIIRDFRICQDCLRKATMSVNPDVTASAGGTPAEPDFFNLKVVRKEAVAQGIYLFELGHPEGLDLPAFTAGSHLTVQV PNGARRNYSLCSDPADTGCYQIAVKRDAAGRGGSISMADDVQVGQLLAVSAPRNNFELHPRASSFLFIAGGIGITPVLSM MRHLKRQGRNPFKLIYCTRDADSTAFVQELTGPEFAAHVQLHHTQGDASQALDLWPVFETPGSAHVYCCGPRGLMDAVAD MSGHWPSGSIHFESFGVDASTYAADTAFTVRLHKTGINVPVDAGQTILQALRACGHHVSSSCESGTCGSCRTTLLAGEAE HRDMVLSDDDKTHQIMVCVSRAKSAELVLDL
Sequences:
>Translated_351_residues MPKIIRDFRICQDCLRKATMSVNPDVTASAGGTPAEPDFFNLKVVRKEAVAQGIYLFELGHPEGLDLPAFTAGSHLTVQV PNGARRNYSLCSDPADTGCYQIAVKRDAAGRGGSISMADDVQVGQLLAVSAPRNNFELHPRASSFLFIAGGIGITPVLSM MRHLKRQGRNPFKLIYCTRDADSTAFVQELTGPEFAAHVQLHHTQGDASQALDLWPVFETPGSAHVYCCGPRGLMDAVAD MSGHWPSGSIHFESFGVDASTYAADTAFTVRLHKTGINVPVDAGQTILQALRACGHHVSSSCESGTCGSCRTTLLAGEAE HRDMVLSDDDKTHQIMVCVSRAKSAELVLDL >Mature_350_residues PKIIRDFRICQDCLRKATMSVNPDVTASAGGTPAEPDFFNLKVVRKEAVAQGIYLFELGHPEGLDLPAFTAGSHLTVQVP NGARRNYSLCSDPADTGCYQIAVKRDAAGRGGSISMADDVQVGQLLAVSAPRNNFELHPRASSFLFIAGGIGITPVLSMM RHLKRQGRNPFKLIYCTRDADSTAFVQELTGPEFAAHVQLHHTQGDASQALDLWPVFETPGSAHVYCCGPRGLMDAVADM SGHWPSGSIHFESFGVDASTYAADTAFTVRLHKTGINVPVDAGQTILQALRACGHHVSSSCESGTCGSCRTTLLAGEAEH RDMVLSDDDKTHQIMVCVSRAKSAELVLDL
Specific function: Unknown
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=321, Percent_Identity=39.8753894080997, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1787098, Length=292, Percent_Identity=27.3972602739726, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.14.12.7 [H]
Molecular weight: Translated: 37684; Mature: 37553
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIIRDFRICQDCLRKATMSVNPDVTASAGGTPAEPDFFNLKVVRKEAVAQGIYLFELG CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEHHHHHHCCEEEEECC HPEGLDLPAFTAGSHLTVQVPNGARRNYSLCSDPADTGCYQIAVKRDAAGRGGSISMADD CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC VQVGQLLAVSAPRNNFELHPRASSFLFIAGGIGITPVLSMMRHLKRQGRNPFKLIYCTRD CCCCEEEEEECCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECC ADSTAFVQELTGPEFAAHVQLHHTQGDASQALDLWPVFETPGSAHVYCCGPRGLMDAVAD CCCHHHHHHHCCCCEEEEEEEEECCCCHHHCEEEEEEECCCCCCEEEEECCHHHHHHHHH MSGHWPSGSIHFESFGVDASTYAADTAFTVRLHKTGINVPVDAGQTILQALRACGHHVSS HCCCCCCCEEEEEEECCCCHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC SCESGTCGSCRTTLLAGEAEHRDMVLSDDDKTHQIMVCVSRAKSAELVLDL CCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEC >Mature Secondary Structure PKIIRDFRICQDCLRKATMSVNPDVTASAGGTPAEPDFFNLKVVRKEAVAQGIYLFELG CHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEHHHHHHCCEEEEECC HPEGLDLPAFTAGSHLTVQVPNGARRNYSLCSDPADTGCYQIAVKRDAAGRGGSISMADD CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC VQVGQLLAVSAPRNNFELHPRASSFLFIAGGIGITPVLSMMRHLKRQGRNPFKLIYCTRD CCCCEEEEEECCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECC ADSTAFVQELTGPEFAAHVQLHHTQGDASQALDLWPVFETPGSAHVYCCGPRGLMDAVAD CCCHHHHHHHCCCCEEEEEEEEECCCCHHHCEEEEEEECCCCCCEEEEECCHHHHHHHHH MSGHWPSGSIHFESFGVDASTYAADTAFTVRLHKTGINVPVDAGQTILQALRACGHHVSS HCCCCCCCEEEEEEECCCCHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC SCESGTCGSCRTTLLAGEAEHRDMVLSDDDKTHQIMVCVSRAKSAELVLDL CCCCCCCCCCCCEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA