| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pht4 [H]
Identifier: 91787787
GI number: 91787787
Start: 1967579
End: 1968778
Strand: Reverse
Name: pht4 [H]
Synonym: Bpro_1908
Alternate gene names: 91787787
Gene position: 1968778-1967579 (Counterclockwise)
Preceding gene: 91787788
Following gene: 91787786
Centisome position: 37.86
GC content: 64.42
Gene sequence:
>1200_bases ATGAAAAAGCGCCCCCTGCAAATCGGCATCGTCGGGCTGGGCCGGGCTTTTACGCTCATGCTGCCCACGTTTGTGCAAGA CAGCCGCGTCAGGCTGGTGGCTGCGACCGATCCCCTGCCCGCCGCACGGGCGCAATTTGAAAAGGATTTTGGCGCCCCTA CGTACGACTCGATGGAAGCCCTGTGCGCCAACCCTGCGGTTCAGGTGCTCTACATCGCCTCCCCGCACCAGTTTCATGCG GCCCACGTGTGCCTGGCAGCGTCCTTCGGCAAGCACGTGCTGGTTGAAAAGCCGATGGCGCTCACCCTCGATGAGTGCAC GCGCATGATTGAAGCGACCCGCAGCGCGGGCGTCCATCTCATCGTCGGCCACAGCCACAGCTTCAACGCGCCCATCCGGC GCACCCGGGAAATCATTGACAGCGGAATTTACGGCAGCGTCCGGATGATTTCAGCGCTGAACTTCACCGACTTCCTCTAC CGGCCGCGCCGCCCGGAAGAGCTCGACACCCAGGCCGGTGGCGGCGTGATTCACAGCCAGGCAACGCACCAGATGGACAT CGTCCGCCTGCTGGGTGGCGGGCTGGTCAACAGTGTGCGTGCCCATACCGGCGCCTGGGACCCTGCCCGCCCGACCGAGG GTGCTTACAGCGCCCTGCTGGGATTTGAAGGGGGCGCCTTCGCCTCCGCCACCTACAGCGGCTACGGCCATTACGATTCG GACGAGCTGATGGGCAACATCGGCGAGATGGGCCAGGCCAAAAGCCAGAGCGACTACGGTGCCGCGCGCAAGCGGCTGCA GGGCGCGGCCACATCAACCCAGGAAACTGCGCTGAAAGCGGCGCGCAACTATGGCGGCAGCCTCTATGTGCCGGCACCGG CCTCGTCGCCCGCCGCAGCCCACCAGCATTTCGGGCAGGTCATCGTCAGTTGCGACAAGGCGGACTTGCGCCCCGGTCCG TTGGGCATCGCCGTCTATACCGACAGCGAAAAATCTTTTGAAGCCCTGCCTTCCCCCGCCATTGCACGCCAGGAAGTGAT TGACGAGCTCTTTGCAACCGTGATGGACGGCCGACCGGCCGTTCACAGCGGTGAGTGGGCACGGGCGACCACCGCCGTCT GCCTGGCCATTCTGGAATCAGCGAGGACGGGCAGGGACTGCCCTCCCGGGTACCAAGTCGGTCACAATACCAATTCATGA
Upstream 100 bases:
>100_bases AGGCCGAACACCGGGACATGGTCTTGAGTGACGACGACAAGACGCACCAGATCATGGTCTGCGTGTCGCGCGCAAAATCT GCCGAACTCGTACTGGACTT
Downstream 100 bases:
>100_bases GCAATGACACCCAGAGCATCATCCGCCACTGGCGCGAAGCCGTGCCCAATGACCGCCTTGCGCACCTGATCCGCGATGCC TCGCGCGCCTTTCAAAAGGC
Product: 4,5-dihydroxyphthalate dehydrogenase
Products: NA
Alternate protein names: DHP dehydrogenase [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKKRPLQIGIVGLGRAFTLMLPTFVQDSRVRLVAATDPLPAARAQFEKDFGAPTYDSMEALCANPAVQVLYIASPHQFHA AHVCLAASFGKHVLVEKPMALTLDECTRMIEATRSAGVHLIVGHSHSFNAPIRRTREIIDSGIYGSVRMISALNFTDFLY RPRRPEELDTQAGGGVIHSQATHQMDIVRLLGGGLVNSVRAHTGAWDPARPTEGAYSALLGFEGGAFASATYSGYGHYDS DELMGNIGEMGQAKSQSDYGAARKRLQGAATSTQETALKAARNYGGSLYVPAPASSPAAAHQHFGQVIVSCDKADLRPGP LGIAVYTDSEKSFEALPSPAIARQEVIDELFATVMDGRPAVHSGEWARATTAVCLAILESARTGRDCPPGYQVGHNTNS
Sequences:
>Translated_399_residues MKKRPLQIGIVGLGRAFTLMLPTFVQDSRVRLVAATDPLPAARAQFEKDFGAPTYDSMEALCANPAVQVLYIASPHQFHA AHVCLAASFGKHVLVEKPMALTLDECTRMIEATRSAGVHLIVGHSHSFNAPIRRTREIIDSGIYGSVRMISALNFTDFLY RPRRPEELDTQAGGGVIHSQATHQMDIVRLLGGGLVNSVRAHTGAWDPARPTEGAYSALLGFEGGAFASATYSGYGHYDS DELMGNIGEMGQAKSQSDYGAARKRLQGAATSTQETALKAARNYGGSLYVPAPASSPAAAHQHFGQVIVSCDKADLRPGP LGIAVYTDSEKSFEALPSPAIARQEVIDELFATVMDGRPAVHSGEWARATTAVCLAILESARTGRDCPPGYQVGHNTNS >Mature_399_residues MKKRPLQIGIVGLGRAFTLMLPTFVQDSRVRLVAATDPLPAARAQFEKDFGAPTYDSMEALCANPAVQVLYIASPHQFHA AHVCLAASFGKHVLVEKPMALTLDECTRMIEATRSAGVHLIVGHSHSFNAPIRRTREIIDSGIYGSVRMISALNFTDFLY RPRRPEELDTQAGGGVIHSQATHQMDIVRLLGGGLVNSVRAHTGAWDPARPTEGAYSALLGFEGGAFASATYSGYGHYDS DELMGNIGEMGQAKSQSDYGAARKRLQGAATSTQETALKAARNYGGSLYVPAPASSPAAAHQHFGQVIVSCDKADLRPGP LGIAVYTDSEKSFEALPSPAIARQEVIDELFATVMDGRPAVHSGEWARATTAVCLAILESARTGRDCPPGYQVGHNTNS
Specific function: Transforms 4,5-dihydro-4,5-dihydroxyphthalate to 4,5- dihydroxyphthalate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082405, Length=196, Percent_Identity=26.0204081632653, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1787574, Length=232, Percent_Identity=28.8793103448276, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42634; Mature: 42634
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRPLQIGIVGLGRAFTLMLPTFVQDSRVRLVAATDPLPAARAQFEKDFGAPTYDSMEA CCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH LCANPAVQVLYIASPHQFHAAHVCLAASFGKHVLVEKPMALTLDECTRMIEATRSAGVHL HHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHCCCEEE IVGHSHSFNAPIRRTREIIDSGIYGSVRMISALNFTDFLYRPRRPEELDTQAGGGVIHSQ EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEECC ATHQMDIVRLLGGGLVNSVRAHTGAWDPARPTEGAYSALLGFEGGAFASATYSGYGHYDS HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCC DELMGNIGEMGQAKSQSDYGAARKRLQGAATSTQETALKAARNYGGSLYVPAPASSPAAA HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHH HQHFGQVIVSCDKADLRPGPLGIAVYTDSEKSFEALPSPAIARQEVIDELFATVMDGRPA HHHHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC VHSGEWARATTAVCLAILESARTGRDCPPGYQVGHNTNS CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKRPLQIGIVGLGRAFTLMLPTFVQDSRVRLVAATDPLPAARAQFEKDFGAPTYDSMEA CCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH LCANPAVQVLYIASPHQFHAAHVCLAASFGKHVLVEKPMALTLDECTRMIEATRSAGVHL HHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHCCCEEE IVGHSHSFNAPIRRTREIIDSGIYGSVRMISALNFTDFLYRPRRPEELDTQAGGGVIHSQ EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEECC ATHQMDIVRLLGGGLVNSVRAHTGAWDPARPTEGAYSALLGFEGGAFASATYSGYGHYDS HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCC DELMGNIGEMGQAKSQSDYGAARKRLQGAATSTQETALKAARNYGGSLYVPAPASSPAAA HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHH HQHFGQVIVSCDKADLRPGPLGIAVYTDSEKSFEALPSPAIARQEVIDELFATVMDGRPA HHHHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC VHSGEWARATTAVCLAILESARTGRDCPPGYQVGHNTNS CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA