Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787781

Identifier: 91787781

GI number: 91787781

Start: 1963843

End: 1964205

Strand: Direct

Name: 91787781

Synonym: Bpro_1902

Alternate gene names: NA

Gene position: 1963843-1964205 (Clockwise)

Preceding gene: 91787780

Following gene: 91787784

Centisome position: 37.76

GC content: 63.64

Gene sequence:

>363_bases
ATGCAAGTCCAGGTCAACTCCAACCACACCATCCACACCGGCGAAGCATTTGAACGCTGGGCCAGCACAGAGTTGAACGA
CTCGCTGAGCCGTTTCAAGGGTGACATTACGCGGGTGGAAGTGCATATGAGTGACGACACCGGCGACGGCGCTGGCGCGG
GCTCCAGGCGCTGCGTGATGGAAGCGCGCCTGTCGCACCACGAGCCGCTGTCAGTCAACCACCACGCGCCCAGCCAGGAC
GAAGCCTTCCGTGGGGCCAGCGACAAACTCAAGCGCCTGATCGAACACACCCTCGGCAAACTGCGCGACCAGCACCGTGC
GCGCGAGTCAATCCGCCGTGAGGTGGACCCCGGCGAAGACTGA

Upstream 100 bases:

>100_bases
GCGCGCACAATGGGCTTTCAGTCGCCTCCGCGTGCGGCTCCATCACGGCGCCGATCCTGTCTGCAGGCCCGCGCCGCAGC
TTCCTGAAGGGAAAAGACAC

Downstream 100 bases:

>100_bases
GCCACCGCCGGCCCCGCCAGAGTGCCGTGGCCAGGGGTCGTGGATTTGCAAGCCCACTGCCTGTTTACGCCAGGCGTTTT
CTGTCAAATCACTGGCGTCT

Product: ribosomal subunit Interface protein

Products: NA

Alternate protein names: Ribosome-Associated Protein

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MQVQVNSNHTIHTGEAFERWASTELNDSLSRFKGDITRVEVHMSDDTGDGAGAGSRRCVMEARLSHHEPLSVNHHAPSQD
EAFRGASDKLKRLIEHTLGKLRDQHRARESIRREVDPGED

Sequences:

>Translated_120_residues
MQVQVNSNHTIHTGEAFERWASTELNDSLSRFKGDITRVEVHMSDDTGDGAGAGSRRCVMEARLSHHEPLSVNHHAPSQD
EAFRGASDKLKRLIEHTLGKLRDQHRARESIRREVDPGED
>Mature_120_residues
MQVQVNSNHTIHTGEAFERWASTELNDSLSRFKGDITRVEVHMSDDTGDGAGAGSRRCVMEARLSHHEPLSVNHHAPSQD
EAFRGASDKLKRLIEHTLGKLRDQHRARESIRREVDPGED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13521; Mature: 13521

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQVNSNHTIHTGEAFERWASTELNDSLSRFKGDITRVEVHMSDDTGDGAGAGSRRCVM
CEEEECCCCEEECCHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHH
EARLSHHEPLSVNHHAPSQDEAFRGASDKLKRLIEHTLGKLRDQHRARESIRREVDPGED
HHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQVQVNSNHTIHTGEAFERWASTELNDSLSRFKGDITRVEVHMSDDTGDGAGAGSRRCVM
CEEEECCCCEEECCHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHH
EARLSHHEPLSVNHHAPSQDEAFRGASDKLKRLIEHTLGKLRDQHRARESIRREVDPGED
HHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA