| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787778
Identifier: 91787778
GI number: 91787778
Start: 1962054
End: 1962683
Strand: Reverse
Name: 91787778
Synonym: Bpro_1899
Alternate gene names: NA
Gene position: 1962683-1962054 (Counterclockwise)
Preceding gene: 91787782
Following gene: 91787774
Centisome position: 37.74
GC content: 61.43
Gene sequence:
>630_bases ATGACCGCACATCACACCCGCCCCCCGGCCATCACCCCCCGCTACCCTGCCCCTGTGCTCAAGGACCTGCCCGAGGACAT CAAGGCCAAGGTGCTGGAGGTGCAGGAGAAAGCCGGCTTTGTGCCCAACGTATTTCTGGCGCTGGCCCGGCGTCCGGCCG AGTGGCGCGCTTTCTTCGCCTACCACGACGCACTGATGCTGAAAGAGGAAGGCTCCAACCCCACGGGCTCTTTGACCAAA GGCGAGCGCGAGATGATCGTGACGACGACCAGCGCGGCCAACCACTGCCTGTACTGCGTGGTGGCGCACGGCGCCATCCT GCGCATTTACGAAAAGAAACCCCTGGTCGCCGACCAGGTGGCAGTGAACTACCGCAAGGCCGACATCACACCGCGCCAGC GCGCCATGCTCGACTTTGCGATGAAGGTGTGCCTGAGTTCCGACGAGATTGAAGACGGCGACTTTAAAGCCCTGCATGCC CATGGTTTCGACGATGAGGACGCCTGGGACATCGCCGCCATCACGGCATTTTTTGGCTTGTCAAACCGTATGGCAAATTT CAGCGGCATGCAACCCAACCCGGAGTTCTACCTGATGGGCCGCGTTCCCAAACCCGCCAAACCAACCTGA
Upstream 100 bases:
>100_bases TTATCAATAGAAGCCCTGCCTGTCCTCGCACAAGCCCTTTTCCCCATCAGGATGACTGCGACAGTTACGCTTCAGTCCAG GCCACTACACGGAGACCCAC
Downstream 100 bases:
>100_bases ACGCGCCGCAGTTAACGCAAATTCAGCCCTCAACCGCCTGACGCATCCAGTCCGGCAGTGTTGTGGCCTTCTGCGCCGGA AAGTCCACCCATATCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; Peroxidase-Like; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase; Peroxidase Family Protein; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Peroxidase-Related Subfamily; Peroxidase-Related Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTAHHTRPPAITPRYPAPVLKDLPEDIKAKVLEVQEKAGFVPNVFLALARRPAEWRAFFAYHDALMLKEEGSNPTGSLTK GEREMIVTTTSAANHCLYCVVAHGAILRIYEKKPLVADQVAVNYRKADITPRQRAMLDFAMKVCLSSDEIEDGDFKALHA HGFDDEDAWDIAAITAFFGLSNRMANFSGMQPNPEFYLMGRVPKPAKPT
Sequences:
>Translated_209_residues MTAHHTRPPAITPRYPAPVLKDLPEDIKAKVLEVQEKAGFVPNVFLALARRPAEWRAFFAYHDALMLKEEGSNPTGSLTK GEREMIVTTTSAANHCLYCVVAHGAILRIYEKKPLVADQVAVNYRKADITPRQRAMLDFAMKVCLSSDEIEDGDFKALHA HGFDDEDAWDIAAITAFFGLSNRMANFSGMQPNPEFYLMGRVPKPAKPT >Mature_208_residues TAHHTRPPAITPRYPAPVLKDLPEDIKAKVLEVQEKAGFVPNVFLALARRPAEWRAFFAYHDALMLKEEGSNPTGSLTKG EREMIVTTTSAANHCLYCVVAHGAILRIYEKKPLVADQVAVNYRKADITPRQRAMLDFAMKVCLSSDEIEDGDFKALHAH GFDDEDAWDIAAITAFFGLSNRMANFSGMQPNPEFYLMGRVPKPAKPT
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23288; Mature: 23157
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHHTRPPAITPRYPAPVLKDLPEDIKAKVLEVQEKAGFVPNVFLALARRPAEWRAFFA CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH YHDALMLKEEGSNPTGSLTKGEREMIVTTTSAANHCLYCVVAHGAILRIYEKKPLVADQV HHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCHHHH AVNYRKADITPRQRAMLDFAMKVCLSSDEIEDGDFKALHAHGFDDEDAWDIAAITAFFGL HHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH SNRMANFSGMQPNPEFYLMGRVPKPAKPT HHHHCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TAHHTRPPAITPRYPAPVLKDLPEDIKAKVLEVQEKAGFVPNVFLALARRPAEWRAFFA CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH YHDALMLKEEGSNPTGSLTKGEREMIVTTTSAANHCLYCVVAHGAILRIYEKKPLVADQV HHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCHHHH AVNYRKADITPRQRAMLDFAMKVCLSSDEIEDGDFKALHAHGFDDEDAWDIAAITAFFGL HHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH SNRMANFSGMQPNPEFYLMGRVPKPAKPT HHHHCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA