Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ytfF [H]

Identifier: 91787776

GI number: 91787776

Start: 1960636

End: 1961568

Strand: Direct

Name: ytfF [H]

Synonym: Bpro_1897

Alternate gene names: 91787776

Gene position: 1960636-1961568 (Clockwise)

Preceding gene: 91787775

Following gene: 91787777

Centisome position: 37.7

GC content: 66.99

Gene sequence:

>933_bases
ATGACGGCTTTGCGACCTGAGCATTCGCGAATGACGGGCGGCATTCTGGCCGGCCTGCTGGCGGGCGCACTGTGGGGGCT
GGTGTTTGTCGTGCCGCGCATGTTGCCCGTGGGGCCCGGGGCCTACTCGTCGGTGGACCTGACGGCCGGGCGTTTTGCGG
CGTATGGTGTGGTGGCCGCTGCGGTGATGCTGCTGGGCCGGCGTAACCGGCGCCTGCCCACGATGCGGCAGGCCTGGGCC
GCCCTGTTCATGAGCGTGCTGGGCTTCACCGCCTACTACCTGCTGCTGGTGCTGGCCATTCGCGATGCCGGCACCGAGGT
GCCCACGCTGATCATCGGCACGATTCCCGTGTGGGTGATGCTGCTCGGCAAACCGCACGGCCTGCGCTGGGCAGCACTGG
TGCCCGGGCTGGCGCTCACGCTGGCCGGCCTGCTGCTCATGATGGGCTCCACGCACGCGGCGGGCGACGCGTCCGCCACG
CAGTTCTGGCGCGGTGTTGTGCTGGCGGCGGCGTCGCTGGTGTGCTGGACGGTGTTCGCGATTGTCAATTCCGCATGGCT
CAAGCGGCATCCCGAGGTCAACGCCACAGACTGGGCCAACTGGCTGGGCGTGGCCACCGGCCTGGGCGCTGTGCTGATGT
GGCTGGTGGCAGGCTCTGATGCGGGCGTGCTGATGGTGCGCGAAGACCGGACCCTCTTTATCGTCCTGTGCGTGTTGGCC
GGGTTCGGCTCCACCTGGCTGGCCACCATTTTCTGGAACATCGCCAGCCAGCGGCTCAGCGCCAGCCTGTGCGGTCAACT
CATCGTCAGTGAAACCATTTTTGCCCTGCTGTATTCTTTTGTCTGGGATGGCCGCTGGCCCACAGCAGCACAGCTCATCG
CCTGCGTGCTGTTCACGCTGGGGATTCTTGCCTCCATCCGGGCTCACCGCTGA

Upstream 100 bases:

>100_bases
CCGCGCAAGCGCATCGGCAAGCCGGAAGACCTGGACGCGCTGCTGGTGATGCTGGCCAGCCGGGAAAGCCATTTCGTCAA
CGGAGCGGTGATTGCGGCAG

Downstream 100 bases:

>100_bases
ATCATTTCCCGAGCTTCCAAAATTTCCCAAACTTTCCAACATGAAAATTGAAATTCCCGAGAAGAAAAAGCTGGTGCGTG
AAATGCACATTCCGATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTALRPEHSRMTGGILAGLLAGALWGLVFVVPRMLPVGPGAYSSVDLTAGRFAAYGVVAAAVMLLGRRNRRLPTMRQAWA
ALFMSVLGFTAYYLLLVLAIRDAGTEVPTLIIGTIPVWVMLLGKPHGLRWAALVPGLALTLAGLLLMMGSTHAAGDASAT
QFWRGVVLAAASLVCWTVFAIVNSAWLKRHPEVNATDWANWLGVATGLGAVLMWLVAGSDAGVLMVREDRTLFIVLCVLA
GFGSTWLATIFWNIASQRLSASLCGQLIVSETIFALLYSFVWDGRWPTAAQLIACVLFTLGILASIRAHR

Sequences:

>Translated_310_residues
MTALRPEHSRMTGGILAGLLAGALWGLVFVVPRMLPVGPGAYSSVDLTAGRFAAYGVVAAAVMLLGRRNRRLPTMRQAWA
ALFMSVLGFTAYYLLLVLAIRDAGTEVPTLIIGTIPVWVMLLGKPHGLRWAALVPGLALTLAGLLLMMGSTHAAGDASAT
QFWRGVVLAAASLVCWTVFAIVNSAWLKRHPEVNATDWANWLGVATGLGAVLMWLVAGSDAGVLMVREDRTLFIVLCVLA
GFGSTWLATIFWNIASQRLSASLCGQLIVSETIFALLYSFVWDGRWPTAAQLIACVLFTLGILASIRAHR
>Mature_309_residues
TALRPEHSRMTGGILAGLLAGALWGLVFVVPRMLPVGPGAYSSVDLTAGRFAAYGVVAAAVMLLGRRNRRLPTMRQAWAA
LFMSVLGFTAYYLLLVLAIRDAGTEVPTLIIGTIPVWVMLLGKPHGLRWAALVPGLALTLAGLLLMMGSTHAAGDASATQ
FWRGVVLAAASLVCWTVFAIVNSAWLKRHPEVNATDWANWLGVATGLGAVLMWLVAGSDAGVLMVREDRTLFIVLCVLAG
FGSTWLATIFWNIASQRLSASLCGQLIVSETIFALLYSFVWDGRWPTAAQLIACVLFTLGILASIRAHR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=313, Percent_Identity=32.2683706070287, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33203; Mature: 33072

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALRPEHSRMTGGILAGLLAGALWGLVFVVPRMLPVGPGAYSSVDLTAGRFAAYGVVAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AVMLLGRRNRRLPTMRQAWAALFMSVLGFTAYYLLLVLAIRDAGTEVPTLIIGTIPVWVM
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLGKPHGLRWAALVPGLALTLAGLLLMMGSTHAAGDASATQFWRGVVLAAASLVCWTVFA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVNSAWLKRHPEVNATDWANWLGVATGLGAVLMWLVAGSDAGVLMVREDRTLFIVLCVLA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
GFGSTWLATIFWNIASQRLSASLCGQLIVSETIFALLYSFVWDGRWPTAAQLIACVLFTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GILASIRAHR
HHHHHHHCCC
>Mature Secondary Structure 
TALRPEHSRMTGGILAGLLAGALWGLVFVVPRMLPVGPGAYSSVDLTAGRFAAYGVVAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AVMLLGRRNRRLPTMRQAWAALFMSVLGFTAYYLLLVLAIRDAGTEVPTLIIGTIPVWVM
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLGKPHGLRWAALVPGLALTLAGLLLMMGSTHAAGDASATQFWRGVVLAAASLVCWTVFA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVNSAWLKRHPEVNATDWANWLGVATGLGAVLMWLVAGSDAGVLMVREDRTLFIVLCVLA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
GFGSTWLATIFWNIASQRLSASLCGQLIVSETIFALLYSFVWDGRWPTAAQLIACVLFTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GILASIRAHR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]