| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787777
Identifier: 91787777
GI number: 91787777
Start: 1961609
End: 1962031
Strand: Direct
Name: 91787777
Synonym: Bpro_1898
Alternate gene names: NA
Gene position: 1961609-1962031 (Clockwise)
Preceding gene: 91787776
Following gene: 91787779
Centisome position: 37.72
GC content: 57.21
Gene sequence:
>423_bases ATGAAAATTGAAATTCCCGAGAAGAAAAAGCTGGTGCGTGAAATGCACATTCCGATTCGCTGGGGCGACATGGATGCGAT GGGCCACCTCAATAACACCAGTTATTTCCGCTACATGGAAACCATACGCATCGACTGGATGTGCGCGATTGGCTGCCAGC CTGATCCGCAAGGCGAGGGCCCGGTGATTGTCAATGCCTTCTGCAATTTCTACAGGCAGCTCGAGTACCCGGGTGATGTG TTGATCAGGATGTATGTGAGCGATCCGGGCCGAACCACCTTCGAAACCTGGGCCACCCTGGAGCGTGCTGACAAGCCGGG TGTGATTTGCGCCGCGGGCGGCGCCACCACGATATGGGTGGACTTTCCGGCGCAGAAGGCCACAACACTGCCGGACTGGA TGCGTCAGGCGGTTGAGGGCTGA
Upstream 100 bases:
>100_bases CTCATCGCCTGCGTGCTGTTCACGCTGGGGATTCTTGCCTCCATCCGGGCTCACCGCTGAATCATTTCCCGAGCTTCCAA AATTTCCCAAACTTTCCAAC
Downstream 100 bases:
>100_bases ATTTGCGTTAACTGCGGCGCGTTCAGGTTGGTTTGGCGGGTTTGGGAACGCGGCCCATCAGGTAGAACTCCGGGTTGGGT TGCATGCCGCTGAAATTTGC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thiesterase; Thioesterase Family Protein Domain Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKIEIPEKKKLVREMHIPIRWGDMDAMGHLNNTSYFRYMETIRIDWMCAIGCQPDPQGEGPVIVNAFCNFYRQLEYPGDV LIRMYVSDPGRTTFETWATLERADKPGVICAAGGATTIWVDFPAQKATTLPDWMRQAVEG
Sequences:
>Translated_140_residues MKIEIPEKKKLVREMHIPIRWGDMDAMGHLNNTSYFRYMETIRIDWMCAIGCQPDPQGEGPVIVNAFCNFYRQLEYPGDV LIRMYVSDPGRTTFETWATLERADKPGVICAAGGATTIWVDFPAQKATTLPDWMRQAVEG >Mature_140_residues MKIEIPEKKKLVREMHIPIRWGDMDAMGHLNNTSYFRYMETIRIDWMCAIGCQPDPQGEGPVIVNAFCNFYRQLEYPGDV LIRMYVSDPGRTTFETWATLERADKPGVICAAGGATTIWVDFPAQKATTLPDWMRQAVEG
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15990; Mature: 15990
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEIPEKKKLVREMHIPIRWGDMDAMGHLNNTSYFRYMETIRIDWMCAIGCQPDPQGEG CCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHEEHEEEEEEEEECCCCCCCCCC PVIVNAFCNFYRQLEYPGDVLIRMYVSDPGRTTFETWATLERADKPGVICAAGGATTIWV CEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEE DFPAQKATTLPDWMRQAVEG ECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKIEIPEKKKLVREMHIPIRWGDMDAMGHLNNTSYFRYMETIRIDWMCAIGCQPDPQGEG CCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHEEHEEEEEEEEECCCCCCCCCC PVIVNAFCNFYRQLEYPGDVLIRMYVSDPGRTTFETWATLERADKPGVICAAGGATTIWV CEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEE DFPAQKATTLPDWMRQAVEG ECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA