| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeeZ [C]
Identifier: 91787762
GI number: 91787762
Start: 1945216
End: 1946244
Strand: Reverse
Name: yeeZ [C]
Synonym: Bpro_1883
Alternate gene names: 91787762
Gene position: 1946244-1945216 (Counterclockwise)
Preceding gene: 91787763
Following gene: 91787761
Centisome position: 37.43
GC content: 66.86
Gene sequence:
>1029_bases ATGAAAATACTGAGAGTCCTGGTGTTGGGCGGGTCCGGCCACATCGGAACGCAGCTCGTTGAGGCGCTGAAAAGCACCCC GTGGGCGGTACCGGTCAGCGCCTCGCGCAGCACTGTCAGCGCGGGCCATGGGAATGTCGAGACGATGCGTGTGGACAGCC GGGACGTCCAGGCGCTGACCTCGGCGCTGGAAGGCTTTGATGCCGTGGTCAATTGCGTCGCGGGCGATGCACGCTCGATT TCTGAAGGCGCCCGGGTACTGGTGCAGGCCGCACTGGGCACGCAGTGCCGGCGCATTGTTCACCTGAGCACGATGTCGGT CTATGGCCCCGTGGAAGGCATGGTCCGCGAAGACACGGCGATCAACCCCAGCCTCGGCTGGTACGGCCAGGCCAAATGCG ACGCGGAAAAGCACATGCGCGAATTTGCACGCCGCGGCGGTGAGGTCGTGGTGCTGCGGCCGGGCTGCGTGTTCGGCCCC GGCAGCGAGTTGTGGGTCGGCCGTGTCGGCAGGTGGCTGCAAACCGGCCGTCTCGGCGATCTGGGGGCGGCCGGCGACGG CTGGTCCAACCTGGTCCACGTGGACGACGTCAGCCAGGCCTTGATGGCGGCGCTGCAGCTGCCCGTCAGGTCGGGTGACA TGCCGGTCTTCAACCTGGCGGCGCCGGACAGCCCGCGCTGGAACGACTATTTCGTAGATCTGGCCCTGGCGCTTCAGGCA ACACCCGTGCTGCGCATCGGGCCGCGCCAGCTCCGCCTTGACGCGCTGCTGGCCGGGCCACCGCTCAAGGTCATGCAACT GGCATTGAAGCGCCTGGGCAGGCCGGCTTCCGGCGTCCCAGACCCGATGCCGCCCGGACTGATTCGCCTGTGGGCCCAGC ACATCCACCTCGATGCCACGCAGGCAGCGCAGACGCTGGGGTTGACCTGGACACCTTACGCTGTCGGTCTGCAGAGTTCA GCAGACTGGTTTGCCGGCAACAAGGCACAACGCAAGCTGCCCATTGGCAAGGCCGTATGCACGCCCTGA
Upstream 100 bases:
>100_bases CCAACCCCACGCTCACCCTGATTGCGATGTCGCTCAGGCTGGGCGAGCACCTGGCGCGGCGCCTGCACACAGAGCATGCC GCGCCCGTGGGAGCGTGCGC
Downstream 100 bases:
>100_bases AAGCCGACACCTACCGGGAATTCGGGCGCTTCAGCGGGTGGCTGGTTCTCAAGGGCGTGGTCTTGCATCCTGCATTTCGC GTGGTGGTCACCTTGCGCTG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKILRVLVLGGSGHIGTQLVEALKSTPWAVPVSASRSTVSAGHGNVETMRVDSRDVQALTSALEGFDAVVNCVAGDARSI SEGARVLVQAALGTQCRRIVHLSTMSVYGPVEGMVREDTAINPSLGWYGQAKCDAEKHMREFARRGGEVVVLRPGCVFGP GSELWVGRVGRWLQTGRLGDLGAAGDGWSNLVHVDDVSQALMAALQLPVRSGDMPVFNLAAPDSPRWNDYFVDLALALQA TPVLRIGPRQLRLDALLAGPPLKVMQLALKRLGRPASGVPDPMPPGLIRLWAQHIHLDATQAAQTLGLTWTPYAVGLQSS ADWFAGNKAQRKLPIGKAVCTP
Sequences:
>Translated_342_residues MKILRVLVLGGSGHIGTQLVEALKSTPWAVPVSASRSTVSAGHGNVETMRVDSRDVQALTSALEGFDAVVNCVAGDARSI SEGARVLVQAALGTQCRRIVHLSTMSVYGPVEGMVREDTAINPSLGWYGQAKCDAEKHMREFARRGGEVVVLRPGCVFGP GSELWVGRVGRWLQTGRLGDLGAAGDGWSNLVHVDDVSQALMAALQLPVRSGDMPVFNLAAPDSPRWNDYFVDLALALQA TPVLRIGPRQLRLDALLAGPPLKVMQLALKRLGRPASGVPDPMPPGLIRLWAQHIHLDATQAAQTLGLTWTPYAVGLQSS ADWFAGNKAQRKLPIGKAVCTP >Mature_342_residues MKILRVLVLGGSGHIGTQLVEALKSTPWAVPVSASRSTVSAGHGNVETMRVDSRDVQALTSALEGFDAVVNCVAGDARSI SEGARVLVQAALGTQCRRIVHLSTMSVYGPVEGMVREDTAINPSLGWYGQAKCDAEKHMREFARRGGEVVVLRPGCVFGP GSELWVGRVGRWLQTGRLGDLGAAGDGWSNLVHVDDVSQALMAALQLPVRSGDMPVFNLAAPDSPRWNDYFVDLALALQA TPVLRIGPRQLRLDALLAGPPLKVMQLALKRLGRPASGVPDPMPPGLIRLWAQHIHLDATQAAQTLGLTWTPYAVGLQSS ADWFAGNKAQRKLPIGKAVCTP
Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 36479; Mature: 36479
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILRVLVLGGSGHIGTQLVEALKSTPWAVPVSASRSTVSAGHGNVETMRVDSRDVQALT CCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEEECCHHHHHHH SALEGFDAVVNCVAGDARSISEGARVLVQAALGTQCRRIVHLSTMSVYGPVEGMVREDTA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC INPSLGWYGQAKCDAEKHMREFARRGGEVVVLRPGCVFGPGSELWVGRVGRWLQTGRLGD CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHHHHHHCCCCCC LGAAGDGWSNLVHVDDVSQALMAALQLPVRSGDMPVFNLAAPDSPRWNDYFVDLALALQA CCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC TPVLRIGPRQLRLDALLAGPPLKVMQLALKRLGRPASGVPDPMPPGLIRLWAQHIHLDAT CCEEEECCHHHEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHH QAAQTLGLTWTPYAVGLQSSADWFAGNKAQRKLPIGKAVCTP HHHHHHCCEECCCEECCCCCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKILRVLVLGGSGHIGTQLVEALKSTPWAVPVSASRSTVSAGHGNVETMRVDSRDVQALT CCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEEECCHHHHHHH SALEGFDAVVNCVAGDARSISEGARVLVQAALGTQCRRIVHLSTMSVYGPVEGMVREDTA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC INPSLGWYGQAKCDAEKHMREFARRGGEVVVLRPGCVFGPGSELWVGRVGRWLQTGRLGD CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHHHHHHCCCCCC LGAAGDGWSNLVHVDDVSQALMAALQLPVRSGDMPVFNLAAPDSPRWNDYFVDLALALQA CCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC TPVLRIGPRQLRLDALLAGPPLKVMQLALKRLGRPASGVPDPMPPGLIRLWAQHIHLDAT CCEEEECCHHHEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHH QAAQTLGLTWTPYAVGLQSSADWFAGNKAQRKLPIGKAVCTP HHHHHHCCEECCCEECCCCCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]