Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is iolI [H]

Identifier: 91787733

GI number: 91787733

Start: 1915526

End: 1916419

Strand: Direct

Name: iolI [H]

Synonym: Bpro_1854

Alternate gene names: 91787733

Gene position: 1915526-1916419 (Clockwise)

Preceding gene: 91787732

Following gene: 91787734

Centisome position: 36.84

GC content: 60.63

Gene sequence:

>894_bases
ATGAGTCACTACAGCGGAAACATAGACGATTTCGGGATGGACACCATCTCGCTGGCCGGCCCGCTCGAGGCCAAGCTCAA
GGCTGTTCGCGAGGCGGGGTTCACCCAGATCATGCTGGCCGCGAGGGACCTGGTGGGCCACCCCGACGGCCTTGACGCCG
CGATTGCGGCGGTGCGTACCAGCGGCTTGCGCGTGACCGGCTTTCAGGTGCTGCGCGATTTTGAGGGCCTGTCGGGCCAT
CTTCACGATTACAAGGTCGACATTGCCAAATCGATGCTGGAGATGTGCCACGCGCTGGACTGCCGGCTGTTGCTGATCTG
TTCATCCACGTCCGTGCATGCCACGGACGACACCCGGGCGCTGGTGAAGGACTTGCGCAAACTGGCCATGCTGGCGATTC
CCATGAATATCCGCATAGCCTATGAAGCCTTGTCGTGGGGGCGTGTCGTCAATGAATTCCCACAGGCCTGGGACATCATT
TGCGAGGCTGACATGCCCAATCTCGGCCTGGGATTTGACTCCTTCCACATGTTTGCGACCAAGACCTCGCTGGACGAGCT
GGACATGCTGGATCCCGACAAGATATTCCTGGTGCAGCTGGCCGACTTCATGTGGACCGAGATCAAGTCGGTCGAGGAAC
GCATTGCCACCGCGCGGCATTTTCGCGTGTTTCCCGGGGAAGGCGTACACAGCGAAGCACTCGCCACGCTGGTGACCAAA
CTCCACGGGCTGGGTTACCGCGGTGACTACAGTTTCGAGGTCTTCAATGACGACTACCAGCAAATGCCTTTACCCACCGT
GGCGCAACGCGCCTGGCGTTCGGCCTTGTGGCTGGGCGAGGACGTCTTGCGGCGTTCCGTGCCCTTGCCCAACCAGATCC
GCCTGAAGCGTTGA

Upstream 100 bases:

>100_bases
AGTCGCGCGGCGTTCACACCGAGGACCGCGGCGCCTTGACCAAAACCTGGCTGGGCAGCGTGAGCTTTGAGCTCGTGCAC
GACGAGCGCGGTTGAAGATC

Downstream 100 bases:

>100_bases
AGGCCTGTTAATTCACTTTTATGACCCCTGACATCGCATGAGCAGCATTTTTGAAGGTTTCCTGTCCACGTCCGAAATCC
TGGAGGCGTTCAGTGAGCGC

Product: xylose isomerase-like protein TIM barrel

Products: homogentisate; CO2

Alternate protein names: 2-keto-myo-inositol isomerase; 2KMI isomerase [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGH
LHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDII
CEADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK
LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR

Sequences:

>Translated_297_residues
MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGH
LHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDII
CEADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK
LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR
>Mature_296_residues
SHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGHL
HDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIIC
EADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTKL
HGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR

Specific function: Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6/3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5/4,6- pentahydroxycyclohexanone) [H]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iolI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 1.13.11.27

Molecular weight: Translated: 33282; Mature: 33151

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRT
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
SGLRVTGFQVLRDFEGLSGHLHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRA
CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
LVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIICEADMPNLGLGFDSFHMFAT
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCHHHHHEEE
KTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR
HHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure 
SHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRT
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
SGLRVTGFQVLRDFEGLSGHLHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRA
CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
LVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIICEADMPNLGLGFDSFHMFAT
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCHHHHHEEE
KTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR
HHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxyphenylpyruvate; O2

Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA