Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is vllY [H]

Identifier: 91787732

GI number: 91787732

Start: 1914615

End: 1915520

Strand: Direct

Name: vllY [H]

Synonym: Bpro_1853

Alternate gene names: 91787732

Gene position: 1914615-1915520 (Clockwise)

Preceding gene: 91787731

Following gene: 91787733

Centisome position: 36.82

GC content: 64.24

Gene sequence:

>906_bases
ATGAGCACCCACCTCCAGACGGCAAGCACTGACCGGGAATCCATCCTCGACGCTGTCAACCCGCTCGGACTGGACGGCAT
TGAATTCATCGAATACACCACCGCCAAGCCGCAGGCGCTGGGGCAGGTGCTGGAGATGATGGGCTTTCGCCCCATCGCAC
GCCACCGCTCGCGCGAGGTGCTGCTGTACCGGCAGGGTGGCATCAATGTGATCGTCAATGCCCACATACCTGCGCTGCCC
GACGGCGCGGCGCCGACCGACAAGCCGGTGATTGCAGCGGTGGCCGTGCGCGTGCGGGATGCGGCAGAGGCCTATCGCCG
GGCGCTGGAGCGCGGTGCCTGGGCCGTGCCCTCGCGCGTGGAAGTCATGGAGCTGAACATTCCCGCCATCCACGGTGTGG
GCAAGAGCCGCATCTATTTCGTGGACCGCTACGACAAGTTTTCCATCTATGACGTGGACTTCGTGCCGATTCCCACGGTG
GACCCGCATCCACCTGCTGTGGCCGGCCTGCATTTTTTCGGCATCGTGCAGTACATCGGCAATGACCGCACCGAAGACTG
GGCGGAGTTTTATCGCGAGCTGTTCGGCTTCACCGAGTTGCCCGCCGAGCAACGCTTTGGCATCCTGCCCAAGGGGCGAA
TTCTGCGCAGTCCATGCCCGCCAGCATCGCGTTTTTACCTCCAGCTGATCGAGCCCGAAGCCAGCGTGCTGGATGTGGAG
GGCGATGAGGGACTGCAGCGCATCGGCCTGGGCACTGCCGACGTGTTGCAGGCGGTGGCCGAACTGGGCATGCGCGGCGT
GGAATTTGTCGAGTCGCGCGGCGTTCACACCGAGGACCGCGGCGCCTTGACCAAAACCTGGCTGGGCAGCGTGAGCTTTG
AGCTCGTGCACGACGAGCGCGGTTGA

Upstream 100 bases:

>100_bases
GGGCGGCGGGCATGTGCCTGGTGTGACGGTCGAATCCGCTTTTCCGGCAAACCAGCCGCTTTGATGTCCTGATCATTCCT
GAACTCAACCGGAGAACACC

Downstream 100 bases:

>100_bases
AGATCATGAGTCACTACAGCGGAAACATAGACGATTTCGGGATGGACACCATCTCGCTGGCCGGCCCGCTCGAGGCCAAG
CTCAAGGCTGTTCGCGAGGC

Product: 4-hydroxyphenylpyruvate dioxygenase

Products: homogentisate; CO2

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALP
DGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTV
DPHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE
GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG

Sequences:

>Translated_301_residues
MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALP
DGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTV
DPHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE
GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG
>Mature_300_residues
STHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALPD
GAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVD
PHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVEG
DEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG

Specific function: Unknown

COG id: COG3185

COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4HPPD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005956
- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: 1.13.11.27

Molecular weight: Translated: 33331; Mature: 33200

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREV
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCEE
LLYRQGGINVIVNAHIPALPDGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRV
EEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
EVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVDPHPPAVAGLHFFGIVQYIG
EEEEECCCEEECCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHC
NDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE
CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHEEEEEECCCCEEEECC
GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDER
CCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECCC
G
C
>Mature Secondary Structure 
STHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREV
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCEE
LLYRQGGINVIVNAHIPALPDGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRV
EEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
EVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVDPHPPAVAGLHFFGIVQYIG
EEEEECCCEEECCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHC
NDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE
CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHEEEEEECCCCEEEECC
GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDER
CCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxyphenylpyruvate; O2

Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA