| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is vllY [H]
Identifier: 91787732
GI number: 91787732
Start: 1914615
End: 1915520
Strand: Direct
Name: vllY [H]
Synonym: Bpro_1853
Alternate gene names: 91787732
Gene position: 1914615-1915520 (Clockwise)
Preceding gene: 91787731
Following gene: 91787733
Centisome position: 36.82
GC content: 64.24
Gene sequence:
>906_bases ATGAGCACCCACCTCCAGACGGCAAGCACTGACCGGGAATCCATCCTCGACGCTGTCAACCCGCTCGGACTGGACGGCAT TGAATTCATCGAATACACCACCGCCAAGCCGCAGGCGCTGGGGCAGGTGCTGGAGATGATGGGCTTTCGCCCCATCGCAC GCCACCGCTCGCGCGAGGTGCTGCTGTACCGGCAGGGTGGCATCAATGTGATCGTCAATGCCCACATACCTGCGCTGCCC GACGGCGCGGCGCCGACCGACAAGCCGGTGATTGCAGCGGTGGCCGTGCGCGTGCGGGATGCGGCAGAGGCCTATCGCCG GGCGCTGGAGCGCGGTGCCTGGGCCGTGCCCTCGCGCGTGGAAGTCATGGAGCTGAACATTCCCGCCATCCACGGTGTGG GCAAGAGCCGCATCTATTTCGTGGACCGCTACGACAAGTTTTCCATCTATGACGTGGACTTCGTGCCGATTCCCACGGTG GACCCGCATCCACCTGCTGTGGCCGGCCTGCATTTTTTCGGCATCGTGCAGTACATCGGCAATGACCGCACCGAAGACTG GGCGGAGTTTTATCGCGAGCTGTTCGGCTTCACCGAGTTGCCCGCCGAGCAACGCTTTGGCATCCTGCCCAAGGGGCGAA TTCTGCGCAGTCCATGCCCGCCAGCATCGCGTTTTTACCTCCAGCTGATCGAGCCCGAAGCCAGCGTGCTGGATGTGGAG GGCGATGAGGGACTGCAGCGCATCGGCCTGGGCACTGCCGACGTGTTGCAGGCGGTGGCCGAACTGGGCATGCGCGGCGT GGAATTTGTCGAGTCGCGCGGCGTTCACACCGAGGACCGCGGCGCCTTGACCAAAACCTGGCTGGGCAGCGTGAGCTTTG AGCTCGTGCACGACGAGCGCGGTTGA
Upstream 100 bases:
>100_bases GGGCGGCGGGCATGTGCCTGGTGTGACGGTCGAATCCGCTTTTCCGGCAAACCAGCCGCTTTGATGTCCTGATCATTCCT GAACTCAACCGGAGAACACC
Downstream 100 bases:
>100_bases AGATCATGAGTCACTACAGCGGAAACATAGACGATTTCGGGATGGACACCATCTCGCTGGCCGGCCCGCTCGAGGCCAAG CTCAAGGCTGTTCGCGAGGC
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: homogentisate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALP DGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTV DPHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG
Sequences:
>Translated_301_residues MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALP DGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTV DPHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG >Mature_300_residues STHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREVLLYRQGGINVIVNAHIPALPD GAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRVEVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVD PHPPAVAGLHFFGIVQYIGNDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVEG DEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDERG
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 1.13.11.27
Molecular weight: Translated: 33331; Mature: 33200
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREV CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCEE LLYRQGGINVIVNAHIPALPDGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRV EEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE EVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVDPHPPAVAGLHFFGIVQYIG EEEEECCCEEECCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHC NDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHEEEEEECCCCEEEECC GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDER CCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECCC G C >Mature Secondary Structure STHLQTASTDRESILDAVNPLGLDGIEFIEYTTAKPQALGQVLEMMGFRPIARHRSREV CCCCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCEE LLYRQGGINVIVNAHIPALPDGAAPTDKPVIAAVAVRVRDAAEAYRRALERGAWAVPSRV EEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE EVMELNIPAIHGVGKSRIYFVDRYDKFSIYDVDFVPIPTVDPHPPAVAGLHFFGIVQYIG EEEEECCCEEECCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHC NDRTEDWAEFYRELFGFTELPAEQRFGILPKGRILRSPCPPASRFYLQLIEPEASVLDVE CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHEEEEEECCCCEEEECC GDEGLQRIGLGTADVLQAVAELGMRGVEFVESRGVHTEDRGALTKTWLGSVSFELVHDER CCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA