| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braC [H]
Identifier: 91787727
GI number: 91787727
Start: 1909747
End: 1910916
Strand: Direct
Name: braC [H]
Synonym: Bpro_1848
Alternate gene names: 91787727
Gene position: 1909747-1910916 (Clockwise)
Preceding gene: 91787726
Following gene: 91787728
Centisome position: 36.72
GC content: 58.97
Gene sequence:
>1170_bases ATGCAGAAACGATTTGCTCTTAAAGTGATAGCTGCTTGCGCAATAACCATGGCGGCTACGGCCGGATTTGCACAAGACGT GATCAAGATTGCCAACATTGTCGAGCTGTCCGGTGGTGGTGCCACGGCCGGCACCAACTTCAAGAACGGCGTGGAACTGG CCGTCAAGGAAATCAATGCCGCGGGCGGTATTCTCGGCAAAAAAATCCAGACCACCACCACCGACACCCAGAGCAACCCC GGCGTGGCCAAGGGCCTGACGCAAAAGGCTATTGACGACAACGTCTTCGCCATCTTCGGTCCGGTGTTTTCCGGCTCCAT CATGGTCAGCATGGCCGAGTCGCGCCGTGCCGAGGTGCCCAATTTCACGGGCGGCGAGGCGGCCAGCATCACCGAGCAGG GCAACCCCTATGTGTTCCGGACCAGCTTCACACAGGCGACGGCCATGCCCAAGGTCGCCCGCTATATCAGCGATCAGGCC AAACTCAAAAGCATCGCCATCATTTATGTGAACAACGATTTCGGCAAGGGTGGCCTTGACTCGATCAAGAAGGCGCTGGC CAATTCGTCAACCAAGGTTGCCACCGAAATTTCCACCGAGCCCGGCCAGATCGACTTTTCGGCTGCCGTGCTGCGTGCCA AGCAGAGCAATGCGGAAGGCGTGTTCGCCTACTCCAATGAAGAAGAGTCGGCGCGGCTGCTGCGCGAGTTGCGCAAGCAG GGCTGGAACAAACCCGTCATTGGCGAAACCACGCTCACCGGCCAGAAGGTCATTGAGCTGGCGGGTGAGGCTGCCAACGG CGCCGTGGCCCATGTGGGCCTGACGGTTGATGCGCCGCAGCCAGCCATTCGCGCCTTCCGTGCCAAGTTTGAGAAGGAAT ACAAGTATGTGTCCGACCACAACGGCATGAAAGGCTACTCCGGCATCTACGTGCTGAAGTCCGCGATCGAGAAGGTCGGC AAGCTCGACCGCAAGGCAGTGGCGGCTGCCCTGCATACCCTGAAGGTGAAAGCGGCGGATCAACCCGGCGTGCTGATGGA TGTCTCGTTTGACAGCAAGGGCGACCTGGACCGCGAGAGTTTCATGATTGAAGTGAAGAACGGCAAGCAGGAAGTGGTTG CCATCTTGCCACCGCTGGGTGCTGCGCCCGCTGCCGCACCAAAGAAATAA
Upstream 100 bases:
>100_bases GTCGGGGAATCACGACTCCCGGCCCATTGATTCCATGTTGATTCCATATTGATCCCACATTGATTTTTTTACTGACTTTC AACCCTTAGTGGAGACAACC
Downstream 100 bases:
>100_bases GCCACCGGCCTCCGGCATCAACGCTTGACGTGACGCGCCGGTACGGGTGGCCCCGGGCCGCCGGTACCGGCAGCATGAAA CCCTCCAGCAAGTACCTTCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MQKRFALKVIAACAITMAATAGFAQDVIKIANIVELSGGGATAGTNFKNGVELAVKEINAAGGILGKKIQTTTTDTQSNP GVAKGLTQKAIDDNVFAIFGPVFSGSIMVSMAESRRAEVPNFTGGEAASITEQGNPYVFRTSFTQATAMPKVARYISDQA KLKSIAIIYVNNDFGKGGLDSIKKALANSSTKVATEISTEPGQIDFSAAVLRAKQSNAEGVFAYSNEEESARLLRELRKQ GWNKPVIGETTLTGQKVIELAGEAANGAVAHVGLTVDAPQPAIRAFRAKFEKEYKYVSDHNGMKGYSGIYVLKSAIEKVG KLDRKAVAAALHTLKVKAADQPGVLMDVSFDSKGDLDRESFMIEVKNGKQEVVAILPPLGAAPAAAPKK
Sequences:
>Translated_389_residues MQKRFALKVIAACAITMAATAGFAQDVIKIANIVELSGGGATAGTNFKNGVELAVKEINAAGGILGKKIQTTTTDTQSNP GVAKGLTQKAIDDNVFAIFGPVFSGSIMVSMAESRRAEVPNFTGGEAASITEQGNPYVFRTSFTQATAMPKVARYISDQA KLKSIAIIYVNNDFGKGGLDSIKKALANSSTKVATEISTEPGQIDFSAAVLRAKQSNAEGVFAYSNEEESARLLRELRKQ GWNKPVIGETTLTGQKVIELAGEAANGAVAHVGLTVDAPQPAIRAFRAKFEKEYKYVSDHNGMKGYSGIYVLKSAIEKVG KLDRKAVAAALHTLKVKAADQPGVLMDVSFDSKGDLDRESFMIEVKNGKQEVVAILPPLGAAPAAAPKK >Mature_389_residues MQKRFALKVIAACAITMAATAGFAQDVIKIANIVELSGGGATAGTNFKNGVELAVKEINAAGGILGKKIQTTTTDTQSNP GVAKGLTQKAIDDNVFAIFGPVFSGSIMVSMAESRRAEVPNFTGGEAASITEQGNPYVFRTSFTQATAMPKVARYISDQA KLKSIAIIYVNNDFGKGGLDSIKKALANSSTKVATEISTEPGQIDFSAAVLRAKQSNAEGVFAYSNEEESARLLRELRKQ GWNKPVIGETTLTGQKVIELAGEAANGAVAHVGLTVDAPQPAIRAFRAKFEKEYKYVSDHNGMKGYSGIYVLKSAIEKVG KLDRKAVAAALHTLKVKAADQPGVLMDVSFDSKGDLDRESFMIEVKNGKQEVVAILPPLGAAPAAAPKK
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=353, Percent_Identity=26.9121813031161, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI48994941, Length=352, Percent_Identity=26.1363636363636, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41059; Mature: 41059
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRFALKVIAACAITMAATAGFAQDVIKIANIVELSGGGATAGTNFKNGVELAVKEINA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHH AGGILGKKIQTTTTDTQSNPGVAKGLTQKAIDDNVFAIFGPVFSGSIMVSMAESRRAEVP CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCEEEEEEHHHHHCCCC NFTGGEAASITEQGNPYVFRTSFTQATAMPKVARYISDQAKLKSIAIIYVNNDFGKGGLD CCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHH SIKKALANSSTKVATEISTEPGQIDFSAAVLRAKQSNAEGVFAYSNEEESARLLRELRKQ HHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC GWNKPVIGETTLTGQKVIELAGEAANGAVAHVGLTVDAPQPAIRAFRAKFEKEYKYVSDH CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC NGMKGYSGIYVLKSAIEKVGKLDRKAVAAALHTLKVKAADQPGVLMDVSFDSKGDLDRES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCC FMIEVKNGKQEVVAILPPLGAAPAAAPKK EEEEECCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MQKRFALKVIAACAITMAATAGFAQDVIKIANIVELSGGGATAGTNFKNGVELAVKEINA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHH AGGILGKKIQTTTTDTQSNPGVAKGLTQKAIDDNVFAIFGPVFSGSIMVSMAESRRAEVP CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCEEEEEEHHHHHCCCC NFTGGEAASITEQGNPYVFRTSFTQATAMPKVARYISDQAKLKSIAIIYVNNDFGKGGLD CCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHH SIKKALANSSTKVATEISTEPGQIDFSAAVLRAKQSNAEGVFAYSNEEESARLLRELRKQ HHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC GWNKPVIGETTLTGQKVIELAGEAANGAVAHVGLTVDAPQPAIRAFRAKFEKEYKYVSDH CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC NGMKGYSGIYVLKSAIEKVGKLDRKAVAAALHTLKVKAADQPGVLMDVSFDSKGDLDRES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCC FMIEVKNGKQEVVAILPPLGAAPAAAPKK EEEEECCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]