| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is aroC [H]
Identifier: 91787721
GI number: 91787721
Start: 1903679
End: 1904776
Strand: Direct
Name: aroC [H]
Synonym: Bpro_1842
Alternate gene names: 91787721
Gene position: 1903679-1904776 (Clockwise)
Preceding gene: 91787719
Following gene: 91787726
Centisome position: 36.61
GC content: 65.39
Gene sequence:
>1098_bases ATGTCTGGCAGTACCTTTGGCAATCTCTTCGCAGTCACCAACTTTGGTGAATCCCACGGCCCGGCCATTGGCTGCGTGAT TGACGGCTGCCCGCCGGGGCTGGCGCTGACCGAAGCGGATATCCAGACCGATCTGGACCGCCGCCGTCCGGGCACCAGCC GCCATGTGACGCAGCGCAACGAACCCGACGCGGTGGAAATCCTGTCGGGCGTGTACGAGGGCAAGACCACCGGCACGCCG ATCTGCCTGCTGATCAGGAACACCGACCAGCGCAGCAAGGACTACGGCAACATCCTGGAAACCTTCCGGCCCGGCCATGC CGACTACAGCTACCTGCACAAATACGGGCGGCGTGACCCCCGCGGCGGCGGCCGCGCCTCGGCCCGCCTGACGGCGCCCA TGGTGGCCGCCGGCGCGGTGGCCAAAAAATGGCTGGCTGAGAAATATGGCACCAGCTTTCGCGGCTGCATGGCGCAGATT GGCGACATCGCGATTCCCTTTGAGTCCTGGGAGCATGTGCCGCGCAATCCCTTCTTTGCGCCGGTGGCCGACGTTTCCCA CCTTGAAGACTACATGGATGCACTGCGCAAGGCCGGTGACTCCTGCGGCGCGCGCATCCGGGTCACCGCTTCCGGTGTGC CCGTCGGGCTGGGCGAGCCGCTGTTTGACAAGCTCGATGCCGACATCGCATTTGCCATGATGGGGATCAATGCCGTCAAG GGCGTGGAGATCGGCGCCGGCTTTGCCAGCGTGACCCAGCGCGGAACAACCCATGGCGACTCACTGTCGCCCGAAGGTTT CCTTTCGAACAATGCCGGTGGTGTGCTCGGCGGCATCAGCACTGGGCAGGACCTGGAAGTCTCGATCGCCATCAAGCCCA CGAGCTCCATCATCACACCGCGCCAGTCGATAGACACGGCGGGCAACCCCGCCGAGGTGGTGACCAAGGGCCGGCACGAC CCCTGCGTGGGCATTCGCGCCACGCCGATTGCCGAGGCCATGCTGGCGCTCGTCGTGATGGAGCATGCGCTGCGCCAGCG TGCGCAAAATGCCGATGTGACGGTCAGCACGCCGGACATCATGCGCGCACGCGGCTGA
Upstream 100 bases:
>100_bases GTGCGCAGCCATTTGCGCCCGTGCCTTCATGCATGAAGCGTTCCAGTCGCAGTTTCCCCGTCACGGCCCGGCGATGCCCG ACGGTTAAAATCATTGCACT
Downstream 100 bases:
>100_bases GTCCCCGCTCAACGCGGTTGCCTTCTGGCTCAGGGTTCGGACGAGGAGCTTCGAAAGGGGTTGAAGCCGGTGATCAGCGC CGTGGCGGCCAGCACCAGCA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSGSTFGNLFAVTNFGESHGPAIGCVIDGCPPGLALTEADIQTDLDRRRPGTSRHVTQRNEPDAVEILSGVYEGKTTGTP ICLLIRNTDQRSKDYGNILETFRPGHADYSYLHKYGRRDPRGGGRASARLTAPMVAAGAVAKKWLAEKYGTSFRGCMAQI GDIAIPFESWEHVPRNPFFAPVADVSHLEDYMDALRKAGDSCGARIRVTASGVPVGLGEPLFDKLDADIAFAMMGINAVK GVEIGAGFASVTQRGTTHGDSLSPEGFLSNNAGGVLGGISTGQDLEVSIAIKPTSSIITPRQSIDTAGNPAEVVTKGRHD PCVGIRATPIAEAMLALVVMEHALRQRAQNADVTVSTPDIMRARG
Sequences:
>Translated_365_residues MSGSTFGNLFAVTNFGESHGPAIGCVIDGCPPGLALTEADIQTDLDRRRPGTSRHVTQRNEPDAVEILSGVYEGKTTGTP ICLLIRNTDQRSKDYGNILETFRPGHADYSYLHKYGRRDPRGGGRASARLTAPMVAAGAVAKKWLAEKYGTSFRGCMAQI GDIAIPFESWEHVPRNPFFAPVADVSHLEDYMDALRKAGDSCGARIRVTASGVPVGLGEPLFDKLDADIAFAMMGINAVK GVEIGAGFASVTQRGTTHGDSLSPEGFLSNNAGGVLGGISTGQDLEVSIAIKPTSSIITPRQSIDTAGNPAEVVTKGRHD PCVGIRATPIAEAMLALVVMEHALRQRAQNADVTVSTPDIMRARG >Mature_364_residues SGSTFGNLFAVTNFGESHGPAIGCVIDGCPPGLALTEADIQTDLDRRRPGTSRHVTQRNEPDAVEILSGVYEGKTTGTPI CLLIRNTDQRSKDYGNILETFRPGHADYSYLHKYGRRDPRGGGRASARLTAPMVAAGAVAKKWLAEKYGTSFRGCMAQIG DIAIPFESWEHVPRNPFFAPVADVSHLEDYMDALRKAGDSCGARIRVTASGVPVGLGEPLFDKLDADIAFAMMGINAVKG VEIGAGFASVTQRGTTHGDSLSPEGFLSNNAGGVLGGISTGQDLEVSIAIKPTSSIITPRQSIDTAGNPAEVVTKGRHDP CVGIRATPIAEAMLALVVMEHALRQRAQNADVTVSTPDIMRARG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=359, Percent_Identity=63.7883008356546, Blast_Score=454, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6321290, Length=373, Percent_Identity=42.8954423592493, Blast_Score=280, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 38644; Mature: 38513
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSTFGNLFAVTNFGESHGPAIGCVIDGCPPGLALTEADIQTDLDRRRPGTSRHVTQRN CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC EPDAVEILSGVYEGKTTGTPICLLIRNTDQRSKDYGNILETFRPGHADYSYLHKYGRRDP CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCC RGGGRASARLTAPMVAAGAVAKKWLAEKYGTSFRGCMAQIGDIAIPFESWEHVPRNPFFA CCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEECHHHHCCCCCCCCCC PVADVSHLEDYMDALRKAGDSCGARIRVTASGVPVGLGEPLFDKLDADIAFAMMGINAVK CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHCHHHHHHHHHHHHHC GVEIGAGFASVTQRGTTHGDSLSPEGFLSNNAGGVLGGISTGQDLEVSIAIKPTSSIITP CCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCHHCCC RQSIDTAGNPAEVVTKGRHDPCVGIRATPIAEAMLALVVMEHALRQRAQNADVTVSTPDI HHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH MRARG HHCCC >Mature Secondary Structure SGSTFGNLFAVTNFGESHGPAIGCVIDGCPPGLALTEADIQTDLDRRRPGTSRHVTQRN CCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC EPDAVEILSGVYEGKTTGTPICLLIRNTDQRSKDYGNILETFRPGHADYSYLHKYGRRDP CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCC RGGGRASARLTAPMVAAGAVAKKWLAEKYGTSFRGCMAQIGDIAIPFESWEHVPRNPFFA CCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEECHHHHCCCCCCCCCC PVADVSHLEDYMDALRKAGDSCGARIRVTASGVPVGLGEPLFDKLDADIAFAMMGINAVK CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHCHHHHHHHHHHHHHC GVEIGAGFASVTQRGTTHGDSLSPEGFLSNNAGGVLGGISTGQDLEVSIAIKPTSSIITP CCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCHHCCC RQSIDTAGNPAEVVTKGRHDPCVGIRATPIAEAMLALVVMEHALRQRAQNADVTVSTPDI HHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH MRARG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA