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The map label for this gene is ymfK [C]

Identifier: 91787695

GI number: 91787695

Start: 1880152

End: 1880775

Strand: Direct

Name: ymfK [C]

Synonym: Bpro_1815

Alternate gene names: 91787695

Gene position: 1880152-1880775 (Clockwise)

Preceding gene: 91787691

Following gene: 91787696

Centisome position: 36.15

GC content: 58.17

Gene sequence:

>624_bases
ATGAGCATTCACACACTAATCCGCGAAAAACGCCGGCTTTTAGGGCTGAGCGTGCAGCAATTCGCTGATGCGGCTGGGGT
AAGCCGTGGTGCTGTCCAGCAATGGGAAAAACCAGACGGAACAGCGCCCAAGCGCGCCAATCAACCCAAAGTAGCCGAAC
TGCTGGGAATTTCGGTGGCCGAACTTGTTTCCGGCGATTCCCGCATGAGCCCGGGCCTGGGCATAGACGTGCGGGCTGAA
ATACCGCTGATCTCTGAAGTGCATGCTGGCAATTACACGGCCATCGACAACTTCCAGCCCAGGAGCGGCTTTGAGATGGT
GCCTGTCACCGTGCCGGTCAAACGCCAGACTTTTGCCCTGCGCGTGCATGGCGACAGCATGGTGGGTATTACCGGCGACT
CCTTTCCCGAAGGTTCGATTCTGGTGGTGGAGCCCGAATTGACGGCCGAGCCGGGCGACTACGTGATTGTGCTGAACAGC
AAGAACCAGACGACGTTCAAGCAGCTGGTCAAGGACGGCGCCGATTACTACCTTAAGCCCCTGAACACCCGCTACCCCGT
CAAACCGCTGGGTAGTGCCGAGATCATCGGCGTGGTGCGCGAGTTCAGCAAACGTTTTCGTTAG

Upstream 100 bases:

>100_bases
TCTTTTACCAGACAAGGCAGTCAGCCATTCGATTTCAGGGAAAGTTTAACTATCATGATGACAATTTTTCTATCTTTCCG
TGGGAATATCCTCATACTCC

Downstream 100 bases:

>100_bases
TGGTTAGTGGTTAGTGGTTAGTGGTTAGTGGGGTGCAGGGCCTGCGACCTTTTTTGCGGGCTTGACTGACCGCTCACTGA
TTCAGGGCAGTTCGAGCTCG

Product: phage lambda repressor protein

Products: NA

Alternate protein names: ORF-96 protein [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSIHTLIREKRRLLGLSVQQFADAAGVSRGAVQQWEKPDGTAPKRANQPKVAELLGISVAELVSGDSRMSPGLGIDVRAE
IPLISEVHAGNYTAIDNFQPRSGFEMVPVTVPVKRQTFALRVHGDSMVGITGDSFPEGSILVVEPELTAEPGDYVIVLNS
KNQTTFKQLVKDGADYYLKPLNTRYPVKPLGSAEIIGVVREFSKRFR

Sequences:

>Translated_207_residues
MSIHTLIREKRRLLGLSVQQFADAAGVSRGAVQQWEKPDGTAPKRANQPKVAELLGISVAELVSGDSRMSPGLGIDVRAE
IPLISEVHAGNYTAIDNFQPRSGFEMVPVTVPVKRQTFALRVHGDSMVGITGDSFPEGSILVVEPELTAEPGDYVIVLNS
KNQTTFKQLVKDGADYYLKPLNTRYPVKPLGSAEIIGVVREFSKRFR
>Mature_206_residues
SIHTLIREKRRLLGLSVQQFADAAGVSRGAVQQWEKPDGTAPKRANQPKVAELLGISVAELVSGDSRMSPGLGIDVRAEI
PLISEVHAGNYTAIDNFQPRSGFEMVPVTVPVKRQTFALRVHGDSMVGITGDSFPEGSILVVEPELTAEPGDYVIVLNSK
NQTTFKQLVKDGADYYLKPLNTRYPVKPLGSAEIIGVVREFSKRFR

Specific function: May control the expression of the integrase and inhibit excision of the mobile element R391, and regulate the expression of other genes as well [H]

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787391, Length=124, Percent_Identity=39.5161290322581, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 22630; Mature: 22499

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHTLIREKRRLLGLSVQQFADAAGVSRGAVQQWEKPDGTAPKRANQPKVAELLGISVA
CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHH
ELVSGDSRMSPGLGIDVRAEIPLISEVHAGNYTAIDNFQPRSGFEMVPVTVPVKRQTFAL
HHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCEEEEEEECCCCCEEEE
RVHGDSMVGITGDSFPEGSILVVEPELTAEPGDYVIVLNSKNQTTFKQLVKDGADYYLKP
EEECCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEC
LNTRYPVKPLGSAEIIGVVREFSKRFR
CCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIHTLIREKRRLLGLSVQQFADAAGVSRGAVQQWEKPDGTAPKRANQPKVAELLGISVA
CHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHH
ELVSGDSRMSPGLGIDVRAEIPLISEVHAGNYTAIDNFQPRSGFEMVPVTVPVKRQTFAL
HHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCEEEEEEECCCCCEEEE
RVHGDSMVGITGDSFPEGSILVVEPELTAEPGDYVIVLNSKNQTTFKQLVKDGADYYLKP
EEECCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEC
LNTRYPVKPLGSAEIIGVVREFSKRFR
CCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157923; 12193633 [H]