Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787658

Identifier: 91787658

GI number: 91787658

Start: 1834790

End: 1835614

Strand: Direct

Name: 91787658

Synonym: Bpro_1776

Alternate gene names: NA

Gene position: 1834790-1835614 (Clockwise)

Preceding gene: 91787657

Following gene: 91787659

Centisome position: 35.28

GC content: 62.79

Gene sequence:

>825_bases
GTGAGCACATCGTCTGAATCAGCACTGTCGGTTTTCGGGGCCGGCGACATCAACAATGCCGCGTATGTTCGCAGCATCAT
CCGGCAGGGCCGGTGGACCTCGCACACCAGCGGCCTGGCCAGCGAACACGTGCAGGGCAATGTGGTCATCCTTCCCGCAG
ACGAAGCCAACGACTTCCTGCGCTACTGCCAGCGCAACCCCAAGCCCTGTCCGCTGCTGGCGGTGTCGGAGCCGGGCCAT
GCCGGGCTGCCGACGCTGGGCGCAGACCTCGACATCCGTACCGATCTGCCACGCTATCGTGTCTGGCGGCACGGCGAGGT
GGTGGACGAGCCTGCAGACATCAGCGCGCTCTGGCGCAAAGACCTGGTCACGTTTGTCATTGGCTGCTCTTTTTCGTTTG
AAGAGGCGCTGATGCAAGCGGGCCTGCCCTTGCGCCATATCGAACAGCAACGCAATGTGGCGATGTATCGCAGCAATATC
GCCACCGAGCCCGCAGGCGCGTTCCATGGGCCCATGGTGGTGTCCATGCGGCCCTTCAAGGCGAGCGATGCGATTCGCGC
CATTCAGATCACATCGCGATTTCCCGACGTGCATGGTGCGCCGGTGCACATGGGCGATCCGGCTCAGATTGGCATCGCCG
ACCTGGCCAGGCCGGACTATGGCGATGCCGTCGAGGTGCTGCCTGATGAGATACCCGTGTTCTGGGCCTGCGGTGTCACG
CCGCAAGCGGCCATTGCGCAGGCGCGCCCCGAGTTTTGCATCACGCACGCACCCGGGGCAATGCTGATTACCGACTTGCT
TAACCATCAATTGGCTGCTTTTTAG

Upstream 100 bases:

>100_bases
GATGGTGTAAGCAAAAAATTTTGAATTTGCTGAAGGCTGAAGACCCCCACACAATTCGCTCATCGTCATCAAGGTGACAC
ATGCAAACGGGGAATTTTCG

Downstream 100 bases:

>100_bases
ACCCCAACTTTTACTGGAGATGATGATGAAAAGACTGCTTGTTTCTCTTGCTGCCGTTACGGCGCTGGGCGCTGCCTTTG
CGCAAACCAAATGGGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGH
AGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNI
ATEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT
PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF

Sequences:

>Translated_274_residues
MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGH
AGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNI
ATEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT
PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF
>Mature_273_residues
STSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGHA
GLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIA
TEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVTP
QAAIAQARPEFCITHAPGAMLITDLLNHQLAAF

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=247, Percent_Identity=35.2226720647773, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI156139133, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34,
Organism=Homo sapiens, GI156139131, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34,
Organism=Homo sapiens, GI156139129, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34,
Organism=Homo sapiens, GI156139137, Length=250, Percent_Identity=32.8, Blast_Score=118, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1776_POLSJ (Q12CN0)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_548610.1
- ProteinModelPortal:   Q12CN0
- SMR:   Q12CN0
- STRING:   Q12CN0
- GeneID:   4015561
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1776
- NMPDR:   fig|296591.1.peg.2830
- eggNOG:   COG4336
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   PSP296591:BPRO_1776-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 29756; Mature: 29625

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFL
CCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHH
RYCQRNPKPCPLLAVSEPGHAGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRK
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHH
DLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIATEPAGAFHGPMVVSMRPFK
HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
ASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT
CCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCHHHHCCCCCCEEEEECCC
PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFL
CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHH
RYCQRNPKPCPLLAVSEPGHAGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRK
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHH
DLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIATEPAGAFHGPMVVSMRPFK
HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
ASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT
CCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCHHHHCCCCCCEEEEECCC
PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA