| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787658
Identifier: 91787658
GI number: 91787658
Start: 1834790
End: 1835614
Strand: Direct
Name: 91787658
Synonym: Bpro_1776
Alternate gene names: NA
Gene position: 1834790-1835614 (Clockwise)
Preceding gene: 91787657
Following gene: 91787659
Centisome position: 35.28
GC content: 62.79
Gene sequence:
>825_bases GTGAGCACATCGTCTGAATCAGCACTGTCGGTTTTCGGGGCCGGCGACATCAACAATGCCGCGTATGTTCGCAGCATCAT CCGGCAGGGCCGGTGGACCTCGCACACCAGCGGCCTGGCCAGCGAACACGTGCAGGGCAATGTGGTCATCCTTCCCGCAG ACGAAGCCAACGACTTCCTGCGCTACTGCCAGCGCAACCCCAAGCCCTGTCCGCTGCTGGCGGTGTCGGAGCCGGGCCAT GCCGGGCTGCCGACGCTGGGCGCAGACCTCGACATCCGTACCGATCTGCCACGCTATCGTGTCTGGCGGCACGGCGAGGT GGTGGACGAGCCTGCAGACATCAGCGCGCTCTGGCGCAAAGACCTGGTCACGTTTGTCATTGGCTGCTCTTTTTCGTTTG AAGAGGCGCTGATGCAAGCGGGCCTGCCCTTGCGCCATATCGAACAGCAACGCAATGTGGCGATGTATCGCAGCAATATC GCCACCGAGCCCGCAGGCGCGTTCCATGGGCCCATGGTGGTGTCCATGCGGCCCTTCAAGGCGAGCGATGCGATTCGCGC CATTCAGATCACATCGCGATTTCCCGACGTGCATGGTGCGCCGGTGCACATGGGCGATCCGGCTCAGATTGGCATCGCCG ACCTGGCCAGGCCGGACTATGGCGATGCCGTCGAGGTGCTGCCTGATGAGATACCCGTGTTCTGGGCCTGCGGTGTCACG CCGCAAGCGGCCATTGCGCAGGCGCGCCCCGAGTTTTGCATCACGCACGCACCCGGGGCAATGCTGATTACCGACTTGCT TAACCATCAATTGGCTGCTTTTTAG
Upstream 100 bases:
>100_bases GATGGTGTAAGCAAAAAATTTTGAATTTGCTGAAGGCTGAAGACCCCCACACAATTCGCTCATCGTCATCAAGGTGACAC ATGCAAACGGGGAATTTTCG
Downstream 100 bases:
>100_bases ACCCCAACTTTTACTGGAGATGATGATGAAAAGACTGCTTGTTTCTCTTGCTGCCGTTACGGCGCTGGGCGCTGCCTTTG CGCAAACCAAATGGGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGH AGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNI ATEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF
Sequences:
>Translated_274_residues MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGH AGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNI ATEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF >Mature_273_residues STSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFLRYCQRNPKPCPLLAVSEPGHA GLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRKDLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIA TEPAGAFHGPMVVSMRPFKASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVTP QAAIAQARPEFCITHAPGAMLITDLLNHQLAAF
Specific function: Unknown
COG id: COG4336
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0317 family
Homologues:
Organism=Homo sapiens, GI156139135, Length=247, Percent_Identity=35.2226720647773, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI156139133, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI156139131, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI156139129, Length=247, Percent_Identity=34.8178137651822, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI156139137, Length=250, Percent_Identity=32.8, Blast_Score=118, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1776_POLSJ (Q12CN0)
Other databases:
- EMBL: CP000316 - RefSeq: YP_548610.1 - ProteinModelPortal: Q12CN0 - SMR: Q12CN0 - STRING: Q12CN0 - GeneID: 4015561 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_1776 - NMPDR: fig|296591.1.peg.2830 - eggNOG: COG4336 - HOGENOM: HBG289473 - OMA: GPMVVSM - ProtClustDB: PRK05463 - BioCyc: PSP296591:BPRO_1776-MONOMER - HAMAP: MF_01830 - InterPro: IPR009906 - InterPro: IPR016938 - PIRSF: PIRSF029755
Pfam domain/function: PF07286 DUF1445
EC number: NA
Molecular weight: Translated: 29756; Mature: 29625
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFL CCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHH RYCQRNPKPCPLLAVSEPGHAGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRK HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHH DLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIATEPAGAFHGPMVVSMRPFK HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC ASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT CCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCHHHHCCCCCCEEEEECCC PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure STSSESALSVFGAGDINNAAYVRSIIRQGRWTSHTSGLASEHVQGNVVILPADEANDFL CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHH RYCQRNPKPCPLLAVSEPGHAGLPTLGADLDIRTDLPRYRVWRHGEVVDEPADISALWRK HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCHHHHEECCCCCCCCCHHHHHHHH DLVTFVIGCSFSFEEALMQAGLPLRHIEQQRNVAMYRSNIATEPAGAFHGPMVVSMRPFK HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC ASDAIRAIQITSRFPDVHGAPVHMGDPAQIGIADLARPDYGDAVEVLPDEIPVFWACGVT CCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCHHHHCCCCCCEEEEECCC PQAAIAQARPEFCITHAPGAMLITDLLNHQLAAF HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA