Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 91787654

GI number: 91787654

Start: 1830841

End: 1832136

Strand: Reverse

Name: yiaN [C]

Synonym: Bpro_1772

Alternate gene names: 91787654

Gene position: 1832136-1830841 (Counterclockwise)

Preceding gene: 91787655

Following gene: 91787652

Centisome position: 35.23

GC content: 59.72

Gene sequence:

>1296_bases
ATGTCTGAACTTGCCATCACCTCTTTACTGATTCTTTCGCTGTTCCTCATATTGGGCTCGGGCGTCTGGATCGGCCTCAC
CCTGTCGGGCGTCGCCTGGATCGGCATGCAGCTTTTTTCCTCACGCGCCGCCGGCGATGCCATGGCCGTGACCATCTGGG
GCTCTTCATCGAGCTGGACACTGACGGCCCTGCCGCTTTTCGTGTGGATGGGAGAAATCCTGTTTCGCACCAAGCTCAGT
GAAAGCATGTTTAAAGGCCTGGCGCCGTGGGTCAGCCGCCTGCCGGGCGGCCTGCTGCACACCAACGTGATCGGTTGCAC
CATTTTTGCCGCGGTGTCGGGCTCCTCAGCCGCCACCTGCGCCACCATAGGCAAGATGACATTGCCGGAACTCGCCAAAC
GCGGCTACCCCGAAGACATCACCATCGGCTCGCTGGCCGGGGCCGGTACGCTGGGCCTGTTGATCCCGCCCTCCATCATC
ATGATCGTTTACGGCGTCAGCGCCGATGTATCGATTGCCAAACTCTTTATCGCAGGCGTTTTCCCCGGCCTGTTGCTCGC
ATCGCTGTTCTCTGGCTACCTAATCGTCTGGGCGCTGATGAACAAGGGCAAAATCCCGCCGCCCGACGCGGCCATGAGCT
TCAGCCAGAAGGTCTACGAATCGCGCCACCTGATTCCCGTGGTGCTGCTCATCAGCGCTGTGCTCGGCTCCATCTACACA
GGTATCGCCACGGCGACAGAGGCGGCGGCCATTGGTGTGGTCGGGTCACTGCTGGTATCGCTGGCGCAACGCGCAATGAC
GTGGACCACCTTCAAAGAGTCGCTGCTGGGCGCCACACGCCTGTATTGCATGATTGCGCTGATTCTGGCGGGTGCCGCGT
TCCTGACGCTGAGCATGGGCTACATCGGCCTGCCGCGCCACCTGGCCGAGTTTGTATCCGGCCTGGGCCTGAGCCCTTTC
CTGCTGATTCTCGCCCTGAGCTTGTTTTACATCATTCTGGGCTGTTTTCTGGACGGCATTTCGATGGTGGTGCTCACCAT
GGGCGTCATCCTGCCCACGGTGCAGACGGCGGGCCTGGACCTCATCTGGTTCGGCATTTTCATCGTCATCGTGGTGGAGA
TGGCGCAAATTACCCCGCCCGTCGGATTCAACCTGTTTGTATTGCAAGGCATGACCAAAAAGGAAATCACCTACATTGCG
CGGGTCACGCTGCCATTCTTCTTCCTGATGTGCGGCATGGTACTGCTGCTGTGGTTTTTCCCGCAGATAGCGACCTGGCT
GCCCGGCAAGATGTAA

Upstream 100 bases:

>100_bases
TTGCCTTCATCGACGAACTGGTGCTGGAGATCATGGGGCGGCGTGTTCAGGCGGACAGCGACGAAGCCTTGCACTACGAA
TAATCAGAAGAACAAATCCC

Downstream 100 bases:

>100_bases
TCGCAAAAATGCTGATAGCCAAGACGGCTGACACCTGAGTACCGGCAAGTGGCTTTTCATCGCCAGGGCCGGGTGAGCCG
CGGGTCATCGGTCAGCGCCC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSELAITSLLILSLFLILGSGVWIGLTLSGVAWIGMQLFSSRAAGDAMAVTIWGSSSSWTLTALPLFVWMGEILFRTKLS
ESMFKGLAPWVSRLPGGLLHTNVIGCTIFAAVSGSSAATCATIGKMTLPELAKRGYPEDITIGSLAGAGTLGLLIPPSII
MIVYGVSADVSIAKLFIAGVFPGLLLASLFSGYLIVWALMNKGKIPPPDAAMSFSQKVYESRHLIPVVLLISAVLGSIYT
GIATATEAAAIGVVGSLLVSLAQRAMTWTTFKESLLGATRLYCMIALILAGAAFLTLSMGYIGLPRHLAEFVSGLGLSPF
LLILALSLFYIILGCFLDGISMVVLTMGVILPTVQTAGLDLIWFGIFIVIVVEMAQITPPVGFNLFVLQGMTKKEITYIA
RVTLPFFFLMCGMVLLLWFFPQIATWLPGKM

Sequences:

>Translated_431_residues
MSELAITSLLILSLFLILGSGVWIGLTLSGVAWIGMQLFSSRAAGDAMAVTIWGSSSSWTLTALPLFVWMGEILFRTKLS
ESMFKGLAPWVSRLPGGLLHTNVIGCTIFAAVSGSSAATCATIGKMTLPELAKRGYPEDITIGSLAGAGTLGLLIPPSII
MIVYGVSADVSIAKLFIAGVFPGLLLASLFSGYLIVWALMNKGKIPPPDAAMSFSQKVYESRHLIPVVLLISAVLGSIYT
GIATATEAAAIGVVGSLLVSLAQRAMTWTTFKESLLGATRLYCMIALILAGAAFLTLSMGYIGLPRHLAEFVSGLGLSPF
LLILALSLFYIILGCFLDGISMVVLTMGVILPTVQTAGLDLIWFGIFIVIVVEMAQITPPVGFNLFVLQGMTKKEITYIA
RVTLPFFFLMCGMVLLLWFFPQIATWLPGKM
>Mature_430_residues
SELAITSLLILSLFLILGSGVWIGLTLSGVAWIGMQLFSSRAAGDAMAVTIWGSSSSWTLTALPLFVWMGEILFRTKLSE
SMFKGLAPWVSRLPGGLLHTNVIGCTIFAAVSGSSAATCATIGKMTLPELAKRGYPEDITIGSLAGAGTLGLLIPPSIIM
IVYGVSADVSIAKLFIAGVFPGLLLASLFSGYLIVWALMNKGKIPPPDAAMSFSQKVYESRHLIPVVLLISAVLGSIYTG
IATATEAAAIGVVGSLLVSLAQRAMTWTTFKESLLGATRLYCMIALILAGAAFLTLSMGYIGLPRHLAEFVSGLGLSPFL
LILALSLFYIILGCFLDGISMVVLTMGVILPTVQTAGLDLIWFGIFIVIVVEMAQITPPVGFNLFVLQGMTKKEITYIAR
VTLPFFFLMCGMVLLLWFFPQIATWLPGKM

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45897; Mature: 45766

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELAITSLLILSLFLILGSGVWIGLTLSGVAWIGMQLFSSRAAGDAMAVTIWGSSSSWT
CCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
LTALPLFVWMGEILFRTKLSESMFKGLAPWVSRLPGGLLHTNVIGCTIFAAVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
ATIGKMTLPELAKRGYPEDITIGSLAGAGTLGLLIPPSIIMIVYGVSADVSIAKLFIAGV
HHHHCCCHHHHHHCCCCCCCCEECCCCCCCCHHHCCCHHHHHEECCCCCHHHHHHHHHHH
FPGLLLASLFSGYLIVWALMNKGKIPPPDAAMSFSQKVYESRHLIPVVLLISAVLGSIYT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GIATATEAAAIGVVGSLLVSLAQRAMTWTTFKESLLGATRLYCMIALILAGAAFLTLSMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YIGLPRHLAEFVSGLGLSPFLLILALSLFYIILGCFLDGISMVVLTMGVILPTVQTAGLD
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LIWFGIFIVIVVEMAQITPPVGFNLFVLQGMTKKEITYIARVTLPFFFLMCGMVLLLWFF
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQIATWLPGKM
HHHHHHCCCCC
>Mature Secondary Structure 
SELAITSLLILSLFLILGSGVWIGLTLSGVAWIGMQLFSSRAAGDAMAVTIWGSSSSWT
CHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
LTALPLFVWMGEILFRTKLSESMFKGLAPWVSRLPGGLLHTNVIGCTIFAAVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
ATIGKMTLPELAKRGYPEDITIGSLAGAGTLGLLIPPSIIMIVYGVSADVSIAKLFIAGV
HHHHCCCHHHHHHCCCCCCCCEECCCCCCCCHHHCCCHHHHHEECCCCCHHHHHHHHHHH
FPGLLLASLFSGYLIVWALMNKGKIPPPDAAMSFSQKVYESRHLIPVVLLISAVLGSIYT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GIATATEAAAIGVVGSLLVSLAQRAMTWTTFKESLLGATRLYCMIALILAGAAFLTLSMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YIGLPRHLAEFVSGLGLSPFLLILALSLFYIILGCFLDGISMVVLTMGVILPTVQTAGLD
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LIWFGIFIVIVVEMAQITPPVGFNLFVLQGMTKKEITYIARVTLPFFFLMCGMVLLLWFF
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQIATWLPGKM
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]