| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787648
Identifier: 91787648
GI number: 91787648
Start: 1825677
End: 1826693
Strand: Direct
Name: 91787648
Synonym: Bpro_1766
Alternate gene names: NA
Gene position: 1825677-1826693 (Clockwise)
Preceding gene: 91787646
Following gene: 91787649
Centisome position: 35.11
GC content: 68.34
Gene sequence:
>1017_bases ATGCAAGTTGACCCACGTTCCAACCCAAATTCGCGACGCGAGTTTCTTCGCGCAGGCTCGGCCACAGTCGCCGCCTTGCT GATCCTGGGCGCCGGCGAAAGCGCCCGTGCGCAGCCAGCGATCGAGACGTTGCATATTCTCAGCGGCTCTGCCGCAGGGA GCACACCCGACATTGTGGCGCGCCACGTCGCCGAGCAGTTGAGCGGCCGCTACGCCAAAACCGCCATCGTCGACAACCGT CCCGGCGCCGCAGGGCGGATCGCCATGAACGCCTTGAAGCTGGCCCCCACGGACGGGTCGACCGTCTGCCTGGCAGCCGG TTCGATCGCCACGGTCAATCCCCACATTTACGCCAATCTGGGGTACGACCCGGCGGTCGATCTGCAGCCGGTTTCGCTGG CGGCCGAGATGCCCTTGGCGTTGGCCGTCGGCCCCGCGGTGCCCGACAGCGTGGTCAACGTGCGCGACTTCATCGAATGG ATGCGGCGCAACCCGACGCTTGCCAACGTCGGATCGCCGGGCGTGGGAAGCTTGCCGCACCTTCTCGAGGCCGTTCTCTT TCGTCAGGCCGATGTGGCTTGGCGGCATGTCGGCTATTCGGGCGGTGCGCCCACCGTGGTCGCCCTGCTGGGGGGACAGA TTGCGGCGCTGGTCCTGCCCGAGGCGGTCTTGGGCCAGCACCGGGCGGCCGGAAAGTTGCGTGTCCTGGCCACGTCGGGG GCGCAGCGCAGCCGCTACATGCCCGACGTACCCAACCTCGTCGAGCAGGGGTATCGCGAGCTGGTGGTGAGCGAGTGGTT CGCGTTCTTCATGGCCGCCCGAGTGCCGGCGGCCATGATCGACGCCACCTCGCAAGCGATCCGCCTGGCCATAGCGCGGC CGGAACTGGCGGGCGCCTTCGCGGAGTTGGGCATGGTCGCGGCGTCGAGCACACCGGCAGAGCTGGCGGCTCGCATCGCG GCGGAACGACGCTATTGGGAGCCGATCATCCGCGCCACCGGCATTCGGGCCGAGTGA
Upstream 100 bases:
>100_bases GCACGGTCGGCATCGACATGCCGCATCATGCATCTTCCCCCAACTCGGCCGATGTGCGCAAATCGGGCTCATCGAATGCA TCACCAACCGGGGAGATCAC
Downstream 100 bases:
>100_bases TCTGGAGCGACCGTGGCACATGACGCTACCGATCCGGCGACCACGCTCCACCGCCTGGTGACCGGCTATCAGGTGTCGCA AGCGATTCACGTCGCGGCAA
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA AERRYWEPIIRATGIRAE
Sequences:
>Translated_338_residues MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA AERRYWEPIIRATGIRAE >Mature_338_residues MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA AERRYWEPIIRATGIRAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35423; Mature: 35423
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVA CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH RHVAEQLSGRYAKTAIVDNRPGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANL HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHEEECCCCCCEEEEECCCEEEECCEEEEEC GYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEWMRRNPTLANVGSPGVGSLPH CCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH LLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHH AELGMVAASSTPAELAARIAAERRYWEPIIRATGIRAE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVA CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH RHVAEQLSGRYAKTAIVDNRPGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANL HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHEEECCCCCCEEEEECCCEEEECCEEEEEC GYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEWMRRNPTLANVGSPGVGSLPH CCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH LLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHH AELGMVAASSTPAELAARIAAERRYWEPIIRATGIRAE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271; 9524276 [H]