| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787616
Identifier: 91787616
GI number: 91787616
Start: 1792197
End: 1793024
Strand: Direct
Name: 91787616
Synonym: Bpro_1734
Alternate gene names: NA
Gene position: 1792197-1793024 (Clockwise)
Preceding gene: 91787615
Following gene: 91787617
Centisome position: 34.46
GC content: 63.41
Gene sequence:
>828_bases ATGATTTTGGTAGCAATTTTGGTGGGAACGCTGGCCGCCGGTATCGGCAGCGTGTGGCTGGCGGCCTTGCTCAGTTTTGG TGTGCTGGCCCGCTACACCCAGCACATGCTCAGTCTGGCGGCCGGGGCGTTGCTGGCCACCGCCTTCATGCACCTGTTGC CCGAAGCGTTTGAGAGCCAGGCCGGCGCCAAGGAGCTGTTTGCCACCCTGCTGGTCGGGCTGGTGTTCTTCTTCCTGCTC GACAAGGCCGAGCTGTGGCACCACGGCCATGAACACCATGACGGCGAACACCATGAGCCTGCCCAACCCGTTCACGATGC GCACGCGCATCACCATCACCGGCATGATCATCATCACCCCGCTGACGGCAAGAAGTCCGGCGGCTGGGCTGTGCTGGCGG GCGACAGCGTGCACGCCTTCGGCGACGGCATCCTGATTGCATCGGCCTTCATGGCCGACCTGCGCCTGGGCGCCGTTGCC GCGCTGGCGGTGCTGGTGCATGAAGTGCCCCACCACATGGGCGACCTGGTGGTGCTGCGCCAAAGCTCCAACAACAACCG CCGTGCGGCTGTGGTCAAAGTGTCACTGGCCGGCGCCGTCACCGCGCTGGGCGGCATGATCGGCTATGCGCTGGTCGACA AGCTGTACGACTACCTGCCTTTCTTTTTGATTGCCGCCTCCAGCAGCTTTATTTATGTGGCGCTGGCCGACCTGATTCCC CAGCTGCAAAAGCGCGTGACGGCGAAGGAAACCGCCGCGCAAATTGCCTGGCTGGTCATTGGCATCGGTATGGTGACGCT GATCAGCGGGCTGGCGCACTGGCATTGA
Upstream 100 bases:
>100_bases TCCGGGGTTTTGTCGTCTGTGGTGTAACCTTCGGGTTGCCTCTACAGGTATCAGGTAATAATTCAGGGCCGCGGCCCAAT AAAAACGGGCGTTATTGGCT
Downstream 100 bases:
>100_bases TGGGCAGGCGTGATTGATCGATTAATTCGCGGCCGGGCGCATCAGCCCTGCCAGCAGGAGATGTCAGTAGATGTCAGGAG ATGTATGAGTAAGGATTTGC
Product: zinc/iron permease
Products: NA
Alternate protein names: ZIP Zinc Transporter; Zinc Transporter ZIP; Transmembrane Protein; Divalent Heavy-Metal Cations Transporter; Metal Cation Transporter ZIP Family; Zinc Transporter; Zinc Transporter Foi; ZIP Zinc Transporter Family
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MILVAILVGTLAAGIGSVWLAALLSFGVLARYTQHMLSLAAGALLATAFMHLLPEAFESQAGAKELFATLLVGLVFFFLL DKAELWHHGHEHHDGEHHEPAQPVHDAHAHHHHRHDHHHPADGKKSGGWAVLAGDSVHAFGDGILIASAFMADLRLGAVA ALAVLVHEVPHHMGDLVVLRQSSNNNRRAAVVKVSLAGAVTALGGMIGYALVDKLYDYLPFFLIAASSSFIYVALADLIP QLQKRVTAKETAAQIAWLVIGIGMVTLISGLAHWH
Sequences:
>Translated_275_residues MILVAILVGTLAAGIGSVWLAALLSFGVLARYTQHMLSLAAGALLATAFMHLLPEAFESQAGAKELFATLLVGLVFFFLL DKAELWHHGHEHHDGEHHEPAQPVHDAHAHHHHRHDHHHPADGKKSGGWAVLAGDSVHAFGDGILIASAFMADLRLGAVA ALAVLVHEVPHHMGDLVVLRQSSNNNRRAAVVKVSLAGAVTALGGMIGYALVDKLYDYLPFFLIAASSSFIYVALADLIP QLQKRVTAKETAAQIAWLVIGIGMVTLISGLAHWH >Mature_275_residues MILVAILVGTLAAGIGSVWLAALLSFGVLARYTQHMLSLAAGALLATAFMHLLPEAFESQAGAKELFATLLVGLVFFFLL DKAELWHHGHEHHDGEHHEPAQPVHDAHAHHHHRHDHHHPADGKKSGGWAVLAGDSVHAFGDGILIASAFMADLRLGAVA ALAVLVHEVPHHMGDLVVLRQSSNNNRRAAVVKVSLAGAVTALGGMIGYALVDKLYDYLPFFLIAASSSFIYVALADLIP QLQKRVTAKETAAQIAWLVIGIGMVTLISGLAHWH
Specific function: Unknown
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40255101, Length=297, Percent_Identity=24.5791245791246, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI187936949, Length=183, Percent_Identity=31.6939890710383, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI55741750, Length=183, Percent_Identity=31.6939890710383, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI190014617, Length=308, Percent_Identity=24.3506493506494, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI117553619, Length=134, Percent_Identity=32.089552238806, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI117553608, Length=134, Percent_Identity=32.089552238806, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI153252201, Length=156, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71992548, Length=159, Percent_Identity=32.0754716981132, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71994730, Length=291, Percent_Identity=24.0549828178694, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71998183, Length=148, Percent_Identity=31.0810810810811, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322166, Length=258, Percent_Identity=23.2558139534884, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24651189, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651193, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651187, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651191, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651195, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651197, Length=283, Percent_Identity=25.7950530035336, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161083817, Length=159, Percent_Identity=31.4465408805031, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24664383, Length=159, Percent_Identity=31.4465408805031, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17864610, Length=180, Percent_Identity=25, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549201, Length=151, Percent_Identity=28.476821192053, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29432; Mature: 29432
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVAILVGTLAAGIGSVWLAALLSFGVLARYTQHMLSLAAGALLATAFMHLLPEAFESQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGAKELFATLLVGLVFFFLLDKAELWHHGHEHHDGEHHEPAQPVHDAHAHHHHRHDHHHP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC ADGKKSGGWAVLAGDSVHAFGDGILIASAFMADLRLGAVAALAVLVHEVPHHMGDLVVLR CCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE QSSNNNRRAAVVKVSLAGAVTALGGMIGYALVDKLYDYLPFFLIAASSSFIYVALADLIP ECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLQKRVTAKETAAQIAWLVIGIGMVTLISGLAHWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILVAILVGTLAAGIGSVWLAALLSFGVLARYTQHMLSLAAGALLATAFMHLLPEAFESQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGAKELFATLLVGLVFFFLLDKAELWHHGHEHHDGEHHEPAQPVHDAHAHHHHRHDHHHP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC ADGKKSGGWAVLAGDSVHAFGDGILIASAFMADLRLGAVAALAVLVHEVPHHMGDLVVLR CCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE QSSNNNRRAAVVKVSLAGAVTALGGMIGYALVDKLYDYLPFFLIAASSSFIYVALADLIP ECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLQKRVTAKETAAQIAWLVIGIGMVTLISGLAHWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA