| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ysgA [C]
Identifier: 91787615
GI number: 91787615
Start: 1791025
End: 1791948
Strand: Direct
Name: ysgA [C]
Synonym: Bpro_1733
Alternate gene names: 91787615
Gene position: 1791025-1791948 (Clockwise)
Preceding gene: 91787614
Following gene: 91787616
Centisome position: 34.44
GC content: 63.53
Gene sequence:
>924_bases ATGGAAATCACCATGCTGAACAACGACCAGAAAAATGACTTCAATGCCTTGTTGCCCGGGCAGTCCAGCGAAAACGGCGC CAGCCGTCGCACCGCCCTGAAAGCTGCCTTGGGTGTGGGCTACGCGGCCACCGCCATGCCCATCATGGCGCAGACCGCCA TCAAGACGCCGGCTCAGGGTCTCAAGACCGGCGAGACGACCTATGAAGTCAACGGCTTCAAGGTGCCCGCTTTTTACGCG GCGCCTGAAGGCAAAACCGACCTGCCGGTGATTCTGGTGATCCAGGAAATCTTTGGCGTGCATGAATACATTGCCGACAC CGCCCGCCGCTTTGCGAAGGCCGGCTACCTGGCCATCGCCCCCGAGCTGTATGCGCGCCAGGGTGACCCCGGCAGTTACA ACGAAATGGCCAGGCTCATGACTGAAGTCGTCGCCAGGGTGTCGGATGAGCAGGTCATGGCCGATCTGGACGGCGCCGTC AAGTGGGCCGGTGCCAATGGTGGCAATGTTCAGAAGGTGGGCATCACCGGCTTTTGCTGGGGTGGCCGCATCACCTGGCT GTATGCCGAGCGGAGCAAAAACGTCAAGGCGGGCGTCGCCTGGTATGGCCGTCTGGTCGGCACCCCTTCGGCGCTCACGC CCAGGCATCCGGTCGACCTGGCGGCCAGCCTGAAGGCACCCGTGCTGGGCCTCTACGGCGGGCAGGACGGCGGCATTCCG CTGACCACCGTCAACCAGATGAAGGACGCGCTGGCCGAGGCCGCCGCCAGGGGCAACGCCGCCGCCAAAGCCAGCGAGTT TGTGGTCTACCCGAAGACCCCTCATGCTTTTCACGCTGACTATCGTCCCAGCTACCGCAAGGAAGCGGCGGATGACGGCT TCAGGCGTACGTTGGAGTGGTTCAAGGCCCGGGGCGTTGCCTGA
Upstream 100 bases:
>100_bases CAAGATCGTCTGAGCCGGCGGTCTCTGCGGTTGGGTCTGCTCCGGCAGGAACTTCCGCAGTCGCACGGACTCCGACTGCG TGCTTCAAACCGCTCCTTCT
Downstream 100 bases:
>100_bases ACCCATAAGTTGACGCCAGGCGCGTGGGCGAGCGCGCCCTGGCGTTGTATGAGCCGCCGCCGCATGGGCCGGCGTCTTTT TTTACGTGCCCCTCTTGACA
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA
Sequences:
>Translated_307_residues MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA >Mature_307_residues MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI48994982, Length=267, Percent_Identity=50.936329588015, Blast_Score=281, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR006311 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 32918; Mature: 32918
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQG CEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LKTGETTYEVNGFKVPAFYAAPEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIA CCCCCCEEEECCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAVKWAGANGGNVQKVGITGFCW HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCEEEEEEEEEEE GGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP CCEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEW CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FKARGVA HHHCCCC >Mature Secondary Structure MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQG CEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LKTGETTYEVNGFKVPAFYAAPEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIA CCCCCCEEEECCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAVKWAGANGGNVQKVGITGFCW HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCEEEEEEEEEEE GGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP CCEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEW CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FKARGVA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168622 [H]