Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ysgA [C]

Identifier: 91787615

GI number: 91787615

Start: 1791025

End: 1791948

Strand: Direct

Name: ysgA [C]

Synonym: Bpro_1733

Alternate gene names: 91787615

Gene position: 1791025-1791948 (Clockwise)

Preceding gene: 91787614

Following gene: 91787616

Centisome position: 34.44

GC content: 63.53

Gene sequence:

>924_bases
ATGGAAATCACCATGCTGAACAACGACCAGAAAAATGACTTCAATGCCTTGTTGCCCGGGCAGTCCAGCGAAAACGGCGC
CAGCCGTCGCACCGCCCTGAAAGCTGCCTTGGGTGTGGGCTACGCGGCCACCGCCATGCCCATCATGGCGCAGACCGCCA
TCAAGACGCCGGCTCAGGGTCTCAAGACCGGCGAGACGACCTATGAAGTCAACGGCTTCAAGGTGCCCGCTTTTTACGCG
GCGCCTGAAGGCAAAACCGACCTGCCGGTGATTCTGGTGATCCAGGAAATCTTTGGCGTGCATGAATACATTGCCGACAC
CGCCCGCCGCTTTGCGAAGGCCGGCTACCTGGCCATCGCCCCCGAGCTGTATGCGCGCCAGGGTGACCCCGGCAGTTACA
ACGAAATGGCCAGGCTCATGACTGAAGTCGTCGCCAGGGTGTCGGATGAGCAGGTCATGGCCGATCTGGACGGCGCCGTC
AAGTGGGCCGGTGCCAATGGTGGCAATGTTCAGAAGGTGGGCATCACCGGCTTTTGCTGGGGTGGCCGCATCACCTGGCT
GTATGCCGAGCGGAGCAAAAACGTCAAGGCGGGCGTCGCCTGGTATGGCCGTCTGGTCGGCACCCCTTCGGCGCTCACGC
CCAGGCATCCGGTCGACCTGGCGGCCAGCCTGAAGGCACCCGTGCTGGGCCTCTACGGCGGGCAGGACGGCGGCATTCCG
CTGACCACCGTCAACCAGATGAAGGACGCGCTGGCCGAGGCCGCCGCCAGGGGCAACGCCGCCGCCAAAGCCAGCGAGTT
TGTGGTCTACCCGAAGACCCCTCATGCTTTTCACGCTGACTATCGTCCCAGCTACCGCAAGGAAGCGGCGGATGACGGCT
TCAGGCGTACGTTGGAGTGGTTCAAGGCCCGGGGCGTTGCCTGA

Upstream 100 bases:

>100_bases
CAAGATCGTCTGAGCCGGCGGTCTCTGCGGTTGGGTCTGCTCCGGCAGGAACTTCCGCAGTCGCACGGACTCCGACTGCG
TGCTTCAAACCGCTCCTTCT

Downstream 100 bases:

>100_bases
ACCCATAAGTTGACGCCAGGCGCGTGGGCGAGCGCGCCCTGGCGTTGTATGAGCCGCCGCCGCATGGGCCGGCGTCTTTT
TTTACGTGCCCCTCTTGACA

Product: carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA
APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV
KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP
LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA

Sequences:

>Translated_307_residues
MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA
APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV
KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP
LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA
>Mature_307_residues
MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQGLKTGETTYEVNGFKVPAFYA
APEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIAPELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAV
KWAGANGGNVQKVGITGFCWGGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP
LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEWFKARGVA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=267, Percent_Identity=50.936329588015, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 32918; Mature: 32918

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQG
CEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
LKTGETTYEVNGFKVPAFYAAPEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIA
CCCCCCEEEECCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
PELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAVKWAGANGGNVQKVGITGFCW
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCEEEEEEEEEEE
GGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP
CCEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC
LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEW
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKARGVA
HHHCCCC
>Mature Secondary Structure
MEITMLNNDQKNDFNALLPGQSSENGASRRTALKAALGVGYAATAMPIMAQTAIKTPAQG
CEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
LKTGETTYEVNGFKVPAFYAAPEGKTDLPVILVIQEIFGVHEYIADTARRFAKAGYLAIA
CCCCCCEEEECCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
PELYARQGDPGSYNEMARLMTEVVARVSDEQVMADLDGAVKWAGANGGNVQKVGITGFCW
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCEEEEEEEEEEE
GGRITWLYAERSKNVKAGVAWYGRLVGTPSALTPRHPVDLAASLKAPVLGLYGGQDGGIP
CCEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC
LTTVNQMKDALAEAAARGNAAAKASEFVVYPKTPHAFHADYRPSYRKEAADDGFRRTLEW
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKARGVA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9168622 [H]