| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787612
Identifier: 91787612
GI number: 91787612
Start: 1787789
End: 1788544
Strand: Reverse
Name: 91787612
Synonym: Bpro_1730
Alternate gene names: NA
Gene position: 1788544-1787789 (Counterclockwise)
Preceding gene: 91787618
Following gene: 91787610
Centisome position: 34.39
GC content: 66.27
Gene sequence:
>756_bases ATGTTTTCCCCTGTCACCTCCCTCCCGCAACTTAAAGGTCCGGGCATGCCTGCCATCCGGTTCAAATTGACCTGCCGGCT GGCGATTTGCGGCCTGTTGGCCCTGGCCGGTTGTGCCACCTCACCACCGCCCGCGGGGCGTGGCGCCCAGGCGCCAGCCG TGCCGGGCGGCAGTGATGCGCCTGTCTTGCTGCGCTTTGACAACAGCCGACTCGAGTTGCAGATACAGGGCCAGACCTGC AAGCTGCAATGGCGCGGCGAGTTCCCTTCCAACGCCGTGGCACTGATGAACCAGGCTTTGTACGAGATGGAGCACCATCG CTGCCAGCGAAAGATCATGGCCCTGGACCTGCAAGGCGGTGACATCGGCCCCGCCATCACGCTCGGCTCCATGCTGAAAA ACCGCCAATTCAACACCGAATTGCTTCCGGGCAGCTACTGCCACACACCCTGCGTGCTGGTACTGGCCGCAGGCCGCCAG CGCCTGCTGCCCGACAGCAGCCCGCCGGCTCGTCTGCTGCTGTCGCAGGTCCGCCCGGACCTGGATTTCGGTCAGGCAAC GTGTGCGACCGAACTCAGCCCCGGCCAGCAGCTCACGCTGCTGCGCTATCTGCGCGCCATGCTGCCGTTGCCGACGGCGA CCTCGCTGTACGAGAAGATCCGCCAGGCGACCTGCCGCAGTCACGAGACGCTGGGCGCACCCGAGGCCCTGTCGCTCGGT CTGGCGACCGGCATGCTGCCTCCCGTGTCGCGCTAG
Upstream 100 bases:
>100_bases ACGCCAAGGTACATGAACACCGACGAATTCAAGGTTTCTTTCGGCGTGCCCGGCAACGGAGCGCCAGTGAAAGCGTCGTC AGTCGAGCAAAGGAACAGCC
Downstream 100 bases:
>100_bases CGCCGCAGGTTCAGTGCGCCTTGTCCCAGTTCGGGCCGACTCCGATCTCGGCCAGCAGCGGGACCCTGAGGTCGGCCACG CCCGCCATGATGCGAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MFSPVTSLPQLKGPGMPAIRFKLTCRLAICGLLALAGCATSPPPAGRGAQAPAVPGGSDAPVLLRFDNSRLELQIQGQTC KLQWRGEFPSNAVALMNQALYEMEHHRCQRKIMALDLQGGDIGPAITLGSMLKNRQFNTELLPGSYCHTPCVLVLAAGRQ RLLPDSSPPARLLLSQVRPDLDFGQATCATELSPGQQLTLLRYLRAMLPLPTATSLYEKIRQATCRSHETLGAPEALSLG LATGMLPPVSR
Sequences:
>Translated_251_residues MFSPVTSLPQLKGPGMPAIRFKLTCRLAICGLLALAGCATSPPPAGRGAQAPAVPGGSDAPVLLRFDNSRLELQIQGQTC KLQWRGEFPSNAVALMNQALYEMEHHRCQRKIMALDLQGGDIGPAITLGSMLKNRQFNTELLPGSYCHTPCVLVLAAGRQ RLLPDSSPPARLLLSQVRPDLDFGQATCATELSPGQQLTLLRYLRAMLPLPTATSLYEKIRQATCRSHETLGAPEALSLG LATGMLPPVSR >Mature_251_residues MFSPVTSLPQLKGPGMPAIRFKLTCRLAICGLLALAGCATSPPPAGRGAQAPAVPGGSDAPVLLRFDNSRLELQIQGQTC KLQWRGEFPSNAVALMNQALYEMEHHRCQRKIMALDLQGGDIGPAITLGSMLKNRQFNTELLPGSYCHTPCVLVLAAGRQ RLLPDSSPPARLLLSQVRPDLDFGQATCATELSPGQQLTLLRYLRAMLPLPTATSLYEKIRQATCRSHETLGAPEALSLG LATGMLPPVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26947; Mature: 26947
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPVTSLPQLKGPGMPAIRFKLTCRLAICGLLALAGCATSPPPAGRGAQAPAVPGGSDA CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PVLLRFDNSRLELQIQGQTCKLQWRGEFPSNAVALMNQALYEMEHHRCQRKIMALDLQGG CEEEEECCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCC DIGPAITLGSMLKNRQFNTELLPGSYCHTPCVLVLAAGRQRLLPDSSPPARLLLSQVRPD CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCC LDFGQATCATELSPGQQLTLLRYLRAMLPLPTATSLYEKIRQATCRSHETLGAPEALSLG CCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LATGMLPPVSR HHHCCCCCCCC >Mature Secondary Structure MFSPVTSLPQLKGPGMPAIRFKLTCRLAICGLLALAGCATSPPPAGRGAQAPAVPGGSDA CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PVLLRFDNSRLELQIQGQTCKLQWRGEFPSNAVALMNQALYEMEHHRCQRKIMALDLQGG CEEEEECCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCC DIGPAITLGSMLKNRQFNTELLPGSYCHTPCVLVLAAGRQRLLPDSSPPARLLLSQVRPD CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCC LDFGQATCATELSPGQQLTLLRYLRAMLPLPTATSLYEKIRQATCRSHETLGAPEALSLG CCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LATGMLPPVSR HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA