| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787530
Identifier: 91787530
GI number: 91787530
Start: 1701654
End: 1702130
Strand: Direct
Name: 91787530
Synonym: Bpro_1648
Alternate gene names: NA
Gene position: 1701654-1702130 (Clockwise)
Preceding gene: 91787529
Following gene: 91787531
Centisome position: 32.72
GC content: 59.54
Gene sequence:
>477_bases ATGACAGTTAAGCGTATGGACAACGTCGGCATCGTGGTGGAAGACATTGATGCCGCCATTGAGTTCTTCACCGAACTTGG TCTCGATCTCGAGGGGCGTGCCCCAGTTGAAGGAGACTGGGCAGATGGCGTCACCGGATTGCACGGCATGCGCGTCGAGA TTGCCATGATGCGTACGCCGGACGGCCACAGCCGGCTCGAGTTGTCCCGCTTCCTCGCGCCGCCCGTTGTCGCCGATCAC CGCGTCGCCCCAGTGAACGCTCTTGGTTACCTACGCGTCATGTTCACCGTGGAGGACATCGACGATACGCTCGTCCGGCT CGGCAAGCGCGGCGCGAAGCTCGTCGGCGAAGTGGTCCAGTATGAAAACATGTATCGGCTCTGCTATATCCGTGGTCCCG AAGGAATTCTCATCGGGCTCGCTCAACAACTCGGGCAGCAGACTTCCCGAGAGAATCCCATAGGACGTAACCGTTGA
Upstream 100 bases:
>100_bases GCATCGGGGCCTAACCGCGCAATCGACAGCGACACTTGGCAATCGCCTATGGCGCTCGCTCGTGCGCGTCATTGCGGACG TTAGACGCCAAGGAGACATC
Downstream 100 bases:
>100_bases GAACTAAAGAAGTGGCGTCTAACCCGGCATATATGGACCCCCCCACAAGCCGGGTCACGCCTCTCATCTCAAACGTTGGG CGTCATAGAGCGCGCCCCAG
Product: methylmalonyl-CoA epimerase
Products: NA
Alternate protein names: Methylmalonyl-CoA Epimerase; Glyoxalase Family Protein; Lactoylglutathione Lyase; Glyoxalase Protein; Lactoylglutathione Lyase GloA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTVKRMDNVGIVVEDIDAAIEFFTELGLDLEGRAPVEGDWADGVTGLHGMRVEIAMMRTPDGHSRLELSRFLAPPVVADH RVAPVNALGYLRVMFTVEDIDDTLVRLGKRGAKLVGEVVQYENMYRLCYIRGPEGILIGLAQQLGQQTSRENPIGRNR
Sequences:
>Translated_158_residues MTVKRMDNVGIVVEDIDAAIEFFTELGLDLEGRAPVEGDWADGVTGLHGMRVEIAMMRTPDGHSRLELSRFLAPPVVADH RVAPVNALGYLRVMFTVEDIDDTLVRLGKRGAKLVGEVVQYENMYRLCYIRGPEGILIGLAQQLGQQTSRENPIGRNR >Mature_157_residues TVKRMDNVGIVVEDIDAAIEFFTELGLDLEGRAPVEGDWADGVTGLHGMRVEIAMMRTPDGHSRLELSRFLAPPVVADHR VAPVNALGYLRVMFTVEDIDDTLVRLGKRGAKLVGEVVQYENMYRLCYIRGPEGILIGLAQQLGQQTSRENPIGRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17548; Mature: 17416
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKRMDNVGIVVEDIDAAIEFFTELGLDLEGRAPVEGDWADGVTGLHGMRVEIAMMRTP CCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC DGHSRLELSRFLAPPVVADHRVAPVNALGYLRVMFTVEDIDDTLVRLGKRGAKLVGEVVQ CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEEEHHHHHHHHHHHCCCHHHHHHHHHH YENMYRLCYIRGPEGILIGLAQQLGQQTSRENPIGRNR HCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TVKRMDNVGIVVEDIDAAIEFFTELGLDLEGRAPVEGDWADGVTGLHGMRVEIAMMRTP CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC DGHSRLELSRFLAPPVVADHRVAPVNALGYLRVMFTVEDIDDTLVRLGKRGAKLVGEVVQ CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEEEHHHHHHHHHHHCCCHHHHHHHHHH YENMYRLCYIRGPEGILIGLAQQLGQQTSRENPIGRNR HCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA