| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is aroK [H]
Identifier: 91787509
GI number: 91787509
Start: 1679734
End: 1680732
Strand: Direct
Name: aroK [H]
Synonym: Bpro_1627
Alternate gene names: 91787509
Gene position: 1679734-1680732 (Clockwise)
Preceding gene: 91787498
Following gene: 91787510
Centisome position: 32.3
GC content: 62.66
Gene sequence:
>999_bases ATGTCAAGCAATATATTGCATCAATCAGGGTTAACACTTAGCGAAGTGGCCACTGACTTTGAACCGGTGAAGACCGAGGC CGCGCAGCTGGATGGTGGGGCGGCGGCGGGTAAAAACCCGTTTCTGGTGGCGCTGGGGCGGCGGGTGGCGGCCTTGCGCG CGCGCCGCGGGCTCACGCGCAAGGCGGTGGCCCTGGCCGCCGATGTGTCCGAGCGCCACCTCGCCAACCTGGAATATGGC CTGGGTAACGCCTCAATACTGGTCCTGCTGCAGGTGGCCGGTGCGCTTCAGTGTTCCCTGGCCGAAATCATTGGCGACCG CACCACCACCTCGCCCGAGTGGTTGATGATCCGCGAGCTGCTCGAGCAGCGTGATGACGCGACGCTCAGGCGCGTGCGCA TCGTGATCGGCGAAATGCTGGGAACCGGCGGCGGCAATGTCATACGCAGTCCGCGTATTGCATTGATTGGGCTGCGTGGC GCCGGCAAGTCCTCGCTGGGGCAGTTGTTGGCCGACGACCTGGGGTTCCCGTTTGTTGAACTGAGCCGGGAAATTGAAAA ATTCGCGGGCTGCAGCGTGTCGGAAATCCAGGCGCTCTACGGCATGAACGCCTACCGCCGCTACGAGCGGCGCGCCCTGG AGGAAACCATCCAGATCTATCCGGAGGCGGTGATCGCCACGCCGGGCGGGCTGGTGTCGGATCCGGCGACGTTTAACCTT TTATTGAGCCATTGCACGACGGTCTGGCTGCAGGCCACGCCCGAGGACCACATGCGGCGGGTGATGGAGCAGGGAGACCT GCGCCCCATGGCCAACAGCAAGGAGGCGATGGAAGACCTGAAAGACATCCTGGCCGGTCGGGCACCTTTTTATTCCAAGG CGGAGTTCACCGTGAACACCAGCGCGCAGCCCCTGCTGCCGACTTCTGCTGCGCTGCGCGAACTGGTTCGCAATGCCCTT GACCTCCCGCTGGATGAAAAAATCAGGAAACATGCATAA
Upstream 100 bases:
>100_bases GTGTGTGGGTGACATGTCCATCTCCGTGCTTGCAACTGCGCCGCGTTCAGGTGTAATATGAATTATTGTGCAAGACGAAC AATAAATCTTCGAAAATCCC
Downstream 100 bases:
>100_bases AAGTGCTTGACGTCTTTCTGTTATAGGCATTATTATTCGTGTATGAATTCTGGTTCCTGCACTATTTTGCTTATTTTGAG GAGATGATGTGAACATTGAC
Product: anaerobic benzoate catabolism transcriptional regulator
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSSNILHQSGLTLSEVATDFEPVKTEAAQLDGGAAAGKNPFLVALGRRVAALRARRGLTRKAVALAADVSERHLANLEYG LGNASILVLLQVAGALQCSLAEIIGDRTTTSPEWLMIRELLEQRDDATLRRVRIVIGEMLGTGGGNVIRSPRIALIGLRG AGKSSLGQLLADDLGFPFVELSREIEKFAGCSVSEIQALYGMNAYRRYERRALEETIQIYPEAVIATPGGLVSDPATFNL LLSHCTTVWLQATPEDHMRRVMEQGDLRPMANSKEAMEDLKDILAGRAPFYSKAEFTVNTSAQPLLPTSAALRELVRNAL DLPLDEKIRKHA
Sequences:
>Translated_332_residues MSSNILHQSGLTLSEVATDFEPVKTEAAQLDGGAAAGKNPFLVALGRRVAALRARRGLTRKAVALAADVSERHLANLEYG LGNASILVLLQVAGALQCSLAEIIGDRTTTSPEWLMIRELLEQRDDATLRRVRIVIGEMLGTGGGNVIRSPRIALIGLRG AGKSSLGQLLADDLGFPFVELSREIEKFAGCSVSEIQALYGMNAYRRYERRALEETIQIYPEAVIATPGGLVSDPATFNL LLSHCTTVWLQATPEDHMRRVMEQGDLRPMANSKEAMEDLKDILAGRAPFYSKAEFTVNTSAQPLLPTSAALRELVRNAL DLPLDEKIRKHA >Mature_331_residues SSNILHQSGLTLSEVATDFEPVKTEAAQLDGGAAAGKNPFLVALGRRVAALRARRGLTRKAVALAADVSERHLANLEYGL GNASILVLLQVAGALQCSLAEIIGDRTTTSPEWLMIRELLEQRDDATLRRVRIVIGEMLGTGGGNVIRSPRIALIGLRGA GKSSLGQLLADDLGFPFVELSREIEKFAGCSVSEIQALYGMNAYRRYERRALEETIQIYPEAVIATPGGLVSDPATFNLL LSHCTTVWLQATPEDHMRRVMEQGDLRPMANSKEAMEDLKDILAGRAPFYSKAEFTVNTSAQPLLPTSAALRELVRNALD LPLDEKIRKHA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=153, Percent_Identity=32.0261437908497, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 36083; Mature: 35952
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNILHQSGLTLSEVATDFEPVKTEAAQLDGGAAAGKNPFLVALGRRVAALRARRGLTR CCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHH KAVALAADVSERHLANLEYGLGNASILVLLQVAGALQCSLAEIIGDRTTTSPEWLMIREL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LEQRDDATLRRVRIVIGEMLGTGGGNVIRSPRIALIGLRGAGKSSLGQLLADDLGFPFVE HHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHH LSREIEKFAGCSVSEIQALYGMNAYRRYERRALEETIQIYPEAVIATPGGLVSDPATFNL HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHH LLSHCTTVWLQATPEDHMRRVMEQGDLRPMANSKEAMEDLKDILAGRAPFYSKAEFTVNT HHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECC SAQPLLPTSAALRELVRNALDLPLDEKIRKHA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure SSNILHQSGLTLSEVATDFEPVKTEAAQLDGGAAAGKNPFLVALGRRVAALRARRGLTR CCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHH KAVALAADVSERHLANLEYGLGNASILVLLQVAGALQCSLAEIIGDRTTTSPEWLMIREL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LEQRDDATLRRVRIVIGEMLGTGGGNVIRSPRIALIGLRGAGKSSLGQLLADDLGFPFVE HHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHH LSREIEKFAGCSVSEIQALYGMNAYRRYERRALEETIQIYPEAVIATPGGLVSDPATFNL HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHH LLSHCTTVWLQATPEDHMRRVMEQGDLRPMANSKEAMEDLKDILAGRAPFYSKAEFTVNT HHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECC SAQPLLPTSAALRELVRNALDLPLDEKIRKHA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA