Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is boxC [H]

Identifier: 91787510

GI number: 91787510

Start: 1680821

End: 1682479

Strand: Direct

Name: boxC [H]

Synonym: Bpro_1628

Alternate gene names: 91787510

Gene position: 1680821-1682479 (Clockwise)

Preceding gene: 91787509

Following gene: 91787511

Centisome position: 32.32

GC content: 63.11

Gene sequence:

>1659_bases
GTGAACATTGACACTCGCGTTGACTATCAAACCAACCCCGGTCGCTATAAACACTGGGCACTGAAGTTTGAAGGGCCCGT
CGCCACGCTGACGGCTGACTTTGACGAAAACGCAGGCCTGCGACCTGGCTACAAGCTCAAGCTCAACAGCTACGACCTTG
GCGTTGATATTGAGCTCAATGATGCGATCAACCGCATTCGCTTCGAGCATCCGGAAGTCCGCACGGTGGTGGTGACCAGT
GCCAAGGAGAAGGTCTTCTGCTCTGGCGCCAACATTTTCATGCTGGGTGTCAGCAGCCACTCCTGGAAGGTGAACTTCTG
CAAATTCACCAACGAAACCCGCAACGGCCTGGAAGACTCCTCCAAATACAGCGGCCTGAAGTTCCTGGCCGCCGTCAATG
GCGCATGTGCCGGTGGTGGCTATGAACTGGCGCTGGCCTGCGACGAAATCATCTTGGTGGATGACCGCTCCAGCGCGGTG
AGCCTGCCCGAGGTGCCGCTGCTGGGCGTGCTGCCCGGCACCGGCGGCCTGACACGCGTCACCGACAAGAAGCATGTGCG
CCACGACCTGGCCGATCTGTTCTGTACCAGCGTCGAAGGCGTGCGCGGCCAGAAGGCCAAGGACTGGCGCCTGGTGGACG
ACATCGCCAAGCCGCAGGTCTTTGCCCAGAAGGTGCGCGAGCGGGCGCTTGAATTGGCCGCCACCAGCGACCGGCCGGCC
GATGGCAAAGGTGTCATGCTGTCACCGGTGGCGTGCGTGCTCGAGGCAGATGCACTGCGCTACCCGAATGTGACGGTCGA
AATTGACCGCGCCAAGCGTACCGCCACCTGGACCGTCAAGGGCCCCACGGGTGCCCAGCCCACCGACGTGGCCGGCATCG
AGGCCGCGGGCGCAGCCTGGTACCCGTTGCAGATGGCGCGCGAACTGGAAGATGCCATCCTGCAAATGCGCACCAACGAG
CTGGACATTGGCACCTGGTTGATCGAGACCCAGGGCGATCCGGCTGCGGTGCTGGCAATGGACGCCACCTTGCTGGCCCA
TCAGAACCACTGGCTGGTGCGTGAAACGATTGGTTTGCTGCGCCGCACGTTCAGCCGTCTGGATGTGTCGTCGCGCAGCC
TGTTTGCGCTGATCGAGCCAGGTTCCTGCTTTGCCGGTACCTTCCTGGAGCTGGCCCTGGCCTGCGACCGCAGCTACCAC
CTGGCGCTGCCCGACGACGAGTCTGGTGCGCCGAAGATCACCGTGGGCGAGGTCAACTTCAGCCTGTACCCGATGGTGAC
GGAACAGAGCCGCCTGGGCCGCCGTTTCTACAACGAGCAACCCGCGCTGGACGCTGTGCGCGCCAGCATGGGCCAGCCAC
TCGATGCCGACGCCGCGTTCGCCCTCGGCCTGGTCACGTCCAACCCGGACGACATCGACTGGACCGACGAAGTACGTATT
GCCGTCGAAGAGCGCGTGTCGATGTCGCCCGATGCCCTCACCGGCATGGAGGCCAACCTGCGCTTCAACGGCCCTGAAAA
CATGTTCACCCGTGTCTTCGGGCGACTCACCGCCTGGCAGAACTGGATCTTCCAACGCCCCAACGCCGTCGGCGAAAAGG
GCGCCCTGAAGGTCTATGGCAAAGGCGACAAGGCCCAGTTCGACTGGAACCGCGTCTAG

Upstream 100 bases:

>100_bases
AAACATGCATAAAAGTGCTTGACGTCTTTCTGTTATAGGCATTATTATTCGTGTATGAATTCTGGTTCCTGCACTATTTT
GCTTATTTTGAGGAGATGAT

Downstream 100 bases:

>100_bases
ACACACCAGCTCTCGTTGTGCGGCGCGAGTCCGGGTGGCGCACCGCAACCGAATCCATCCCCCGAATCAGCCTTGTTTTT
TGGAGACCATGATGTCCAGC

Product: benzoyl-CoA-dihydrodiol lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MNIDTRVDYQTNPGRYKHWALKFEGPVATLTADFDENAGLRPGYKLKLNSYDLGVDIELNDAINRIRFEHPEVRTVVVTS
AKEKVFCSGANIFMLGVSSHSWKVNFCKFTNETRNGLEDSSKYSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAV
SLPEVPLLGVLPGTGGLTRVTDKKHVRHDLADLFCTSVEGVRGQKAKDWRLVDDIAKPQVFAQKVRERALELAATSDRPA
DGKGVMLSPVACVLEADALRYPNVTVEIDRAKRTATWTVKGPTGAQPTDVAGIEAAGAAWYPLQMARELEDAILQMRTNE
LDIGTWLIETQGDPAAVLAMDATLLAHQNHWLVRETIGLLRRTFSRLDVSSRSLFALIEPGSCFAGTFLELALACDRSYH
LALPDDESGAPKITVGEVNFSLYPMVTEQSRLGRRFYNEQPALDAVRASMGQPLDADAAFALGLVTSNPDDIDWTDEVRI
AVEERVSMSPDALTGMEANLRFNGPENMFTRVFGRLTAWQNWIFQRPNAVGEKGALKVYGKGDKAQFDWNRV

Sequences:

>Translated_552_residues
MNIDTRVDYQTNPGRYKHWALKFEGPVATLTADFDENAGLRPGYKLKLNSYDLGVDIELNDAINRIRFEHPEVRTVVVTS
AKEKVFCSGANIFMLGVSSHSWKVNFCKFTNETRNGLEDSSKYSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAV
SLPEVPLLGVLPGTGGLTRVTDKKHVRHDLADLFCTSVEGVRGQKAKDWRLVDDIAKPQVFAQKVRERALELAATSDRPA
DGKGVMLSPVACVLEADALRYPNVTVEIDRAKRTATWTVKGPTGAQPTDVAGIEAAGAAWYPLQMARELEDAILQMRTNE
LDIGTWLIETQGDPAAVLAMDATLLAHQNHWLVRETIGLLRRTFSRLDVSSRSLFALIEPGSCFAGTFLELALACDRSYH
LALPDDESGAPKITVGEVNFSLYPMVTEQSRLGRRFYNEQPALDAVRASMGQPLDADAAFALGLVTSNPDDIDWTDEVRI
AVEERVSMSPDALTGMEANLRFNGPENMFTRVFGRLTAWQNWIFQRPNAVGEKGALKVYGKGDKAQFDWNRV
>Mature_552_residues
MNIDTRVDYQTNPGRYKHWALKFEGPVATLTADFDENAGLRPGYKLKLNSYDLGVDIELNDAINRIRFEHPEVRTVVVTS
AKEKVFCSGANIFMLGVSSHSWKVNFCKFTNETRNGLEDSSKYSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAV
SLPEVPLLGVLPGTGGLTRVTDKKHVRHDLADLFCTSVEGVRGQKAKDWRLVDDIAKPQVFAQKVRERALELAATSDRPA
DGKGVMLSPVACVLEADALRYPNVTVEIDRAKRTATWTVKGPTGAQPTDVAGIEAAGAAWYPLQMARELEDAILQMRTNE
LDIGTWLIETQGDPAAVLAMDATLLAHQNHWLVRETIGLLRRTFSRLDVSSRSLFALIEPGSCFAGTFLELALACDRSYH
LALPDDESGAPKITVGEVNFSLYPMVTEQSRLGRRFYNEQPALDAVRASMGQPLDADAAFALGLVTSNPDDIDWTDEVRI
AVEERVSMSPDALTGMEANLRFNGPENMFTRVFGRLTAWQNWIFQRPNAVGEKGALKVYGKGDKAQFDWNRV

Specific function: Catalyzes the ring opening of 2,3-dihydro-2,3- dihydroxybenzoyl-CoA to form 3,4-dehydroadipyl-CoA semialdehyde [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the benzoyl-CoA oxygenase component C family [H]

Homologues:

Organism=Homo sapiens, GI20127408, Length=172, Percent_Identity=33.1395348837209, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1788682, Length=201, Percent_Identity=33.8308457711443, Blast_Score=83, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17558304, Length=163, Percent_Identity=33.1288343558282, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144276, Length=180, Percent_Identity=29.4444444444444, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508951, Length=196, Percent_Identity=29.5918367346939, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508953, Length=180, Percent_Identity=29.4444444444444, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017633
- InterPro:   IPR001753 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.1.2.44 [H]

Molecular weight: Translated: 60735; Mature: 60735

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDTRVDYQTNPGRYKHWALKFEGPVATLTADFDENAGLRPGYKLKLNSYDLGVDIELN
CCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEEEEEEEEH
DAINRIRFEHPEVRTVVVTSAKEKVFCSGANIFMLGVSSHSWKVNFCKFTNETRNGLEDS
HHHHHHCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEECCHHHCCCCCC
SKYSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAVSLPEVPLLGVLPGTGGLTRV
CCCCCEEEEEECCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEECCCCCCEEC
TDKKHVRHDLADLFCTSVEGVRGQKAKDWRLVDDIAKPQVFAQKVRERALELAATSDRPA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
DGKGVMLSPVACVLEADALRYPNVTVEIDRAKRTATWTVKGPTGAQPTDVAGIEAAGAAW
CCCCEEECCHHEEEECCCEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
YPLQMARELEDAILQMRTNELDIGTWLIETQGDPAAVLAMDATLLAHQNHWLVRETIGLL
CHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHH
RRTFSRLDVSSRSLFALIEPGSCFAGTFLELALACDRSYHLALPDDESGAPKITVGEVNF
HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECE
SLYPMVTEQSRLGRRFYNEQPALDAVRASMGQPLDADAAFALGLVTSNPDDIDWTDEVRI
EEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
AVEERVSMSPDALTGMEANLRFNGPENMFTRVFGRLTAWQNWIFQRPNAVGEKGALKVYG
EEEHHCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
KGDKAQFDWNRV
CCCCCCCCCCCC
>Mature Secondary Structure
MNIDTRVDYQTNPGRYKHWALKFEGPVATLTADFDENAGLRPGYKLKLNSYDLGVDIELN
CCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEEEEEEEEH
DAINRIRFEHPEVRTVVVTSAKEKVFCSGANIFMLGVSSHSWKVNFCKFTNETRNGLEDS
HHHHHHCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEECCHHHCCCCCC
SKYSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAVSLPEVPLLGVLPGTGGLTRV
CCCCCEEEEEECCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEECCCCCCEEC
TDKKHVRHDLADLFCTSVEGVRGQKAKDWRLVDDIAKPQVFAQKVRERALELAATSDRPA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
DGKGVMLSPVACVLEADALRYPNVTVEIDRAKRTATWTVKGPTGAQPTDVAGIEAAGAAW
CCCCEEECCHHEEEECCCEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
YPLQMARELEDAILQMRTNELDIGTWLIETQGDPAAVLAMDATLLAHQNHWLVRETIGLL
CHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHH
RRTFSRLDVSSRSLFALIEPGSCFAGTFLELALACDRSYHLALPDDESGAPKITVGEVNF
HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECE
SLYPMVTEQSRLGRRFYNEQPALDAVRASMGQPLDADAAFALGLVTSNPDDIDWTDEVRI
EEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
AVEERVSMSPDALTGMEANLRFNGPENMFTRVFGRLTAWQNWIFQRPNAVGEKGALKVYG
EEEHHCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
KGDKAQFDWNRV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12399500 [H]