The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is braD [H]

Identifier: 91787503

GI number: 91787503

Start: 1672820

End: 1673683

Strand: Reverse

Name: braD [H]

Synonym: Bpro_1621

Alternate gene names: 91787503

Gene position: 1673683-1672820 (Counterclockwise)

Preceding gene: 91787504

Following gene: 91787502

Centisome position: 32.18

GC content: 63.31

Gene sequence:

>864_bases
ATGGATTTAGCCAACTTCCTCATCCAGCTGCTCAACAGCGTGCAGTACGGGCTGCTGCTGTTCATGCTGGCCGCCGGCCT
GACCCTGATCTTCGGCATCATGGGCGTGGTCAACCTGGCGCACGGCAGCTTTTACATGCTGGGCGCTTATCTGGCCTGGT
CGCTCAGCGCCCAGTTCGGCAGCCTGACGCTGGCCATTGTCGTGGGCGCCGTGCTCTCGGTCATCTTTGGCCTGGCACTC
GAATGGCTGCTGTTTCGCCACTTCTATCAGCGCGACCACCTCGACCAGGTGCTGCTGACCTTCGGGCTGATCTACATCTT
CGAAGAGCTGCGCTCCATCCTGTGGGGCGACGACGTGCACGGCGTGACCATTCCCGAGCTGCTCGGCGCCTCCATCCCGC
TGACCGAGAACCTGTCCTACCCGGTGTATCGCCTGTTCATGGCCGGCGTCTGCATCGCGCTGGCGCTGGGCCTGTATGGG
CTGATCTCCAAGACCCGCCTGGGCATGAAGATACGCGCCGGCGCCTTCAACCGCGAGATGGCCGAATCGCTGGGCATCAA
CATCAAGCGCATCCATGCCGTGGTGTTTGCCCTGGGCGTCGGCCTGGCGGCCGTCGCCGGCATGATCGCCGCACCGATCG
CCAGCGTCTACCCCAACATGGGCTCGCAGGTGCTCATCATGTGTTTTGTCGTCGTCGTGATCGGCGGCATCGGCTCGGTG
CGCGGCGCCCTGATTGCCGCCCTGCTGGTCGGGCTGGTCGATACCTTTGGCAAGGTCTTGCTGCCCTCCGTGGCCGGCAT
GCTGGTCTACATGCTGATGGCCGGCGTTCTGCTGTGGAAACCTGAAGGGCTGTTCAAGCAATGA

Upstream 100 bases:

>100_bases
CAAGGAAAACAAAATGGTCAGTGTCGCCGCCAAGGGGCTGGCGGATCCTGCGCGCGGTTGCCGCCTGTGATCTGGCATGA
CGACTTGACATGACCGATTT

Downstream 100 bases:

>100_bases
GCGCACAAAAATCCAACCTCGAAGTCCTGCCGCGCGGCGTGCAGGTGGCGCTCGTGCTGGGGCTGATCGCCCTCGTGGCC
TTTCCCTTTGCCGGCACCGA

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDLANFLIQLLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAWSLSAQFGSLTLAIVVGAVLSVIFGLAL
EWLLFRHFYQRDHLDQVLLTFGLIYIFEELRSILWGDDVHGVTIPELLGASIPLTENLSYPVYRLFMAGVCIALALGLYG
LISKTRLGMKIRAGAFNREMAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASVYPNMGSQVLIMCFVVVVIGGIGSV
RGALIAALLVGLVDTFGKVLLPSVAGMLVYMLMAGVLLWKPEGLFKQ

Sequences:

>Translated_287_residues
MDLANFLIQLLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAWSLSAQFGSLTLAIVVGAVLSVIFGLAL
EWLLFRHFYQRDHLDQVLLTFGLIYIFEELRSILWGDDVHGVTIPELLGASIPLTENLSYPVYRLFMAGVCIALALGLYG
LISKTRLGMKIRAGAFNREMAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASVYPNMGSQVLIMCFVVVVIGGIGSV
RGALIAALLVGLVDTFGKVLLPSVAGMLVYMLMAGVLLWKPEGLFKQ
>Mature_287_residues
MDLANFLIQLLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAWSLSAQFGSLTLAIVVGAVLSVIFGLAL
EWLLFRHFYQRDHLDQVLLTFGLIYIFEELRSILWGDDVHGVTIPELLGASIPLTENLSYPVYRLFMAGVCIALALGLYG
LISKTRLGMKIRAGAFNREMAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASVYPNMGSQVLIMCFVVVVIGGIGSV
RGALIAALLVGLVDTFGKVLLPSVAGMLVYMLMAGVLLWKPEGLFKQ

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=298, Percent_Identity=29.5302013422819, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30842; Mature: 30842

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043; 2509433 [H]