Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is livK [C]

Identifier: 91787504

GI number: 91787504

Start: 1673714

End: 1674883

Strand: Reverse

Name: livK [C]

Synonym: Bpro_1622

Alternate gene names: 91787504

Gene position: 1674883-1673714 (Counterclockwise)

Preceding gene: 91787505

Following gene: 91787503

Centisome position: 32.21

GC content: 61.88

Gene sequence:

>1170_bases
ATGAAAAAACTTTCTACCCCTTCCCTCTTGGCCCTGTCCTGTGCCTTGCTCGCTGCCTCAGTCGCCCAGGCGCAGAGCAG
CGACACCATCAAGGTCGGCCTGATGCTGCCCTATACCGGCACCTTTGCCCAGCTCGGCGTGGCCATCGAAAACGGCTTCA
AGCTGTTTGTGCAGGAACAGGGTGGCGCGCTCGCCGGCAAGAAGATCGAGTTCTTCAAGGTCGACGATGAGTCCGAGCCG
TCCAAGGGCATCGAAAACGCCAACAAGCTGGTTCAGCGCGACAAGGTGGATGTGTTGATTGGCACCGTGCACTCCGGCGT
TGCCATGGGCATGGCCAAGGTGGCGAAAGACACCAAGACCCTGCTCATCATTCCGAATGCGGGGGCAGACGTGATCACCG
GGTCTTTGTGCGCACCCAACATCTTTCGCACCTCGTTCACCAACTGGCAACCGGCCTACGCCATGGGACTGGTGGCCGCC
GAGCGCAAACACAAGAGCGCCGTCACCATCACCTGGAAGTATGCAGCCGGCGAGGAGTCGGTCAAGGGCTTCAAGGAGGG
CTTTGAAGCCAAAGGCGGCAAGGTCACCAAGGAGCTGAGCGTGCCTTTCCCGACGGTGGAATTCCAGGCCTTGCTGGCCG
AAATCGCCGCGGCGAAGCCCGATGCCGTCTACACGTTTTTTGCGGGTGCGGGTGCCGTCAAGTTTGTCAAGGACTATGCC
GCCGCCGGCCTCAAGGGCAAGATTCCTCTGTACGGCGCAGGCTTTCTGACCGACGGCACGCTGGAGGCGCAGGGAGACGC
GGCCACGGGCCTGCTCACCACCCTGCACTATGCCGATGGCCTCGACACGCCGAAAGACCGCGCCTTCCGTCTCAGCTACG
CCAAGACCTACAAGCTGCAGCCCGATGTGTACGCGGTCCAGGGTTACGACGCGGCGCAAATGCTGGCGGCCGGACTGAAA
GCCGCTGGCGGCGACTTCAGCAAGCGCGAGGTGCTCATCAAGGGCATGGAGCAGGCAAAGATCGACAGCCCGCGTGGCGC
GTTCACCCTGTCAAAGGCGCACAACCCGGTGCAGGACATCTACCTGCGCAAAGTCGAGAACAAGGAAAACAAAATGGTCA
GTGTCGCCGCCAAGGGGCTGGCGGATCCTGCGCGCGGTTGCCGCCTGTGA

Upstream 100 bases:

>100_bases
GCGTAGACCCGAATTCCCCGCATTTTCCGCATTCCTCGTTCGCCCCTTGCTTGCCCCCTGTATTTGCCCCTTATTCGCCC
AATCCAACGGAGACATACCA

Downstream 100 bases:

>100_bases
TCTGGCATGACGACTTGACATGACCGATTTATGGATTTAGCCAACTTCCTCATCCAGCTGCTCAACAGCGTGCAGTACGG
GCTGCTGCTGTTCATGCTGG

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP
SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA
ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA
AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK
AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL

Sequences:

>Translated_389_residues
MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP
SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA
ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA
AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK
AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL
>Mature_389_residues
MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP
SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA
ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA
AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK
AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41244; Mature: 41244

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHEEEECCEEEEEEEC
GGALAGKKIEFFKVDDESEPSKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKT
CCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCE
LLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAAERKHKSAVTITWKYAAGEES
EEEEECCCCCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH
VKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQ
HCCCCCCCCEEECCEEECCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHEEEEEC
PDVYAVQGYDAAQMLAAGLKAAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDI
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEECCCCCCHHHH
YLRKVENKENKMVSVAAKGLADPARGCRL
HHHHHCCCCCCEEEEHHHCCCCCHHCCCC
>Mature Secondary Structure
MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHEEEECCEEEEEEEC
GGALAGKKIEFFKVDDESEPSKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKT
CCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCE
LLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAAERKHKSAVTITWKYAAGEES
EEEEECCCCCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH
VKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQ
HCCCCCCCCEEECCEEECCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHEEEEEC
PDVYAVQGYDAAQMLAAGLKAAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDI
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEECCCCCCHHHH
YLRKVENKENKMVSVAAKGLADPARGCRL
HHHHHCCCCCCEEEEHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA