| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [C]
Identifier: 91787504
GI number: 91787504
Start: 1673714
End: 1674883
Strand: Reverse
Name: livK [C]
Synonym: Bpro_1622
Alternate gene names: 91787504
Gene position: 1674883-1673714 (Counterclockwise)
Preceding gene: 91787505
Following gene: 91787503
Centisome position: 32.21
GC content: 61.88
Gene sequence:
>1170_bases ATGAAAAAACTTTCTACCCCTTCCCTCTTGGCCCTGTCCTGTGCCTTGCTCGCTGCCTCAGTCGCCCAGGCGCAGAGCAG CGACACCATCAAGGTCGGCCTGATGCTGCCCTATACCGGCACCTTTGCCCAGCTCGGCGTGGCCATCGAAAACGGCTTCA AGCTGTTTGTGCAGGAACAGGGTGGCGCGCTCGCCGGCAAGAAGATCGAGTTCTTCAAGGTCGACGATGAGTCCGAGCCG TCCAAGGGCATCGAAAACGCCAACAAGCTGGTTCAGCGCGACAAGGTGGATGTGTTGATTGGCACCGTGCACTCCGGCGT TGCCATGGGCATGGCCAAGGTGGCGAAAGACACCAAGACCCTGCTCATCATTCCGAATGCGGGGGCAGACGTGATCACCG GGTCTTTGTGCGCACCCAACATCTTTCGCACCTCGTTCACCAACTGGCAACCGGCCTACGCCATGGGACTGGTGGCCGCC GAGCGCAAACACAAGAGCGCCGTCACCATCACCTGGAAGTATGCAGCCGGCGAGGAGTCGGTCAAGGGCTTCAAGGAGGG CTTTGAAGCCAAAGGCGGCAAGGTCACCAAGGAGCTGAGCGTGCCTTTCCCGACGGTGGAATTCCAGGCCTTGCTGGCCG AAATCGCCGCGGCGAAGCCCGATGCCGTCTACACGTTTTTTGCGGGTGCGGGTGCCGTCAAGTTTGTCAAGGACTATGCC GCCGCCGGCCTCAAGGGCAAGATTCCTCTGTACGGCGCAGGCTTTCTGACCGACGGCACGCTGGAGGCGCAGGGAGACGC GGCCACGGGCCTGCTCACCACCCTGCACTATGCCGATGGCCTCGACACGCCGAAAGACCGCGCCTTCCGTCTCAGCTACG CCAAGACCTACAAGCTGCAGCCCGATGTGTACGCGGTCCAGGGTTACGACGCGGCGCAAATGCTGGCGGCCGGACTGAAA GCCGCTGGCGGCGACTTCAGCAAGCGCGAGGTGCTCATCAAGGGCATGGAGCAGGCAAAGATCGACAGCCCGCGTGGCGC GTTCACCCTGTCAAAGGCGCACAACCCGGTGCAGGACATCTACCTGCGCAAAGTCGAGAACAAGGAAAACAAAATGGTCA GTGTCGCCGCCAAGGGGCTGGCGGATCCTGCGCGCGGTTGCCGCCTGTGA
Upstream 100 bases:
>100_bases GCGTAGACCCGAATTCCCCGCATTTTCCGCATTCCTCGTTCGCCCCTTGCTTGCCCCCTGTATTTGCCCCTTATTCGCCC AATCCAACGGAGACATACCA
Downstream 100 bases:
>100_bases TCTGGCATGACGACTTGACATGACCGATTTATGGATTTAGCCAACTTCCTCATCCAGCTGCTCAACAGCGTGCAGTACGG GCTGCTGCTGTTCATGCTGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL
Sequences:
>Translated_389_residues MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL >Mature_389_residues MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQGGALAGKKIEFFKVDDESEP SKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKTLLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAA ERKHKSAVTITWKYAAGEESVKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQPDVYAVQGYDAAQMLAAGLK AAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDIYLRKVENKENKMVSVAAKGLADPARGCRL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41244; Mature: 41244
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHEEEECCEEEEEEEC GGALAGKKIEFFKVDDESEPSKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKT CCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCE LLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAAERKHKSAVTITWKYAAGEES EEEEECCCCCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH VKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQ HCCCCCCCCEEECCEEECCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHEEEEEC PDVYAVQGYDAAQMLAAGLKAAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDI CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEECCCCCCHHHH YLRKVENKENKMVSVAAKGLADPARGCRL HHHHHCCCCCCEEEEHHHCCCCCHHCCCC >Mature Secondary Structure MKKLSTPSLLALSCALLAASVAQAQSSDTIKVGLMLPYTGTFAQLGVAIENGFKLFVQEQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHEEEECCEEEEEEEC GGALAGKKIEFFKVDDESEPSKGIENANKLVQRDKVDVLIGTVHSGVAMGMAKVAKDTKT CCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCE LLIIPNAGADVITGSLCAPNIFRTSFTNWQPAYAMGLVAAERKHKSAVTITWKYAAGEES EEEEECCCCCCEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH VKGFKEGFEAKGGKVTKELSVPFPTVEFQALLAEIAAAKPDAVYTFFAGAGAVKFVKDYA HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH AAGLKGKIPLYGAGFLTDGTLEAQGDAATGLLTTLHYADGLDTPKDRAFRLSYAKTYKLQ HCCCCCCCCEEECCEEECCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHEEEEEC PDVYAVQGYDAAQMLAAGLKAAGGDFSKREVLIKGMEQAKIDSPRGAFTLSKAHNPVQDI CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEECCCCCCHHHH YLRKVENKENKMVSVAAKGLADPARGCRL HHHHHCCCCCCEEEEHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA