| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787468
Identifier: 91787468
GI number: 91787468
Start: 1632233
End: 1632481
Strand: Reverse
Name: 91787468
Synonym: Bpro_1583
Alternate gene names: NA
Gene position: 1632481-1632233 (Counterclockwise)
Preceding gene: 91787469
Following gene: 91787467
Centisome position: 31.39
GC content: 60.24
Gene sequence:
>249_bases GTGACCCCGCTCTTGGAGAAAGAGCTGGAGTCACGGTCGCCAACGGCGAAGTACAGGTGCATGAAGTGCGGAAACGGTGA GTTTGAGGTCCAGGCGATCCGCACCGCTCGCAGCCTTTTGGGCTCGGTGTTTGGAGTCGAGAGCGCCAAGTACACCGCCG TCATCTGCCGTCGGTGTAGCTTTACGGAGTTCTACAACGGGCGCGTCCCTCCTGGCGAGCAGGCGTTGGACTTCGTTTTG GGAAGGTAG
Upstream 100 bases:
>100_bases TTGGTCTGTGCCCGACGCCGAAGCGATTCCTCGCCTCAGTCACAGCGAGCTTTCGGAACATCTCCGCCTCAGCAAGGTGA ATCCCGGGCACTATCTGCAC
Downstream 100 bases:
>100_bases CGGCGTGAGCCGAAGCACGCAGGCTAACAGGTCGTTCGACACGGACACGCAGCGGCATTGCGCCGCGAAGCGTGCTGGCG AGCGTACGCCTCGCGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTPLLEKELESRSPTAKYRCMKCGNGEFEVQAIRTARSLLGSVFGVESAKYTAVICRRCSFTEFYNGRVPPGEQALDFVL GR
Sequences:
>Translated_82_residues MTPLLEKELESRSPTAKYRCMKCGNGEFEVQAIRTARSLLGSVFGVESAKYTAVICRRCSFTEFYNGRVPPGEQALDFVL GR >Mature_81_residues TPLLEKELESRSPTAKYRCMKCGNGEFEVQAIRTARSLLGSVFGVESAKYTAVICRRCSFTEFYNGRVPPGEQALDFVLG R
Specific function: Unknown
COG id: COG3478
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9169; Mature: 9037
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLEKELESRSPTAKYRCMKCGNGEFEVQAIRTARSLLGSVFGVESAKYTAVICRRCS CCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC FTEFYNGRVPPGEQALDFVLGR CHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TPLLEKELESRSPTAKYRCMKCGNGEFEVQAIRTARSLLGSVFGVESAKYTAVICRRCS CCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC FTEFYNGRVPPGEQALDFVLGR CHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA