| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787469
Identifier: 91787469
GI number: 91787469
Start: 1632967
End: 1634166
Strand: Reverse
Name: 91787469
Synonym: Bpro_1584
Alternate gene names: NA
Gene position: 1634166-1632967 (Counterclockwise)
Preceding gene: 91787470
Following gene: 91787468
Centisome position: 31.42
GC content: 66.42
Gene sequence:
>1200_bases ATGGCCACCTTGGCCGATGCGCTGCGCCAGCATGGCGCGGCGTATCTGGCAACCCATTCCCTCTCGACCCCGCAAGCCAA AGCGTGGCGGGGCATTGTTGCCTGCCGTACCGCAGCACTGGGAGGTCAGCAACTGGCCTGTGATGCCTGCGGCCACAGCC ACTGGCAATACCACTCCTGTCGCAACCGCCACTGCCCGCAGTGCGGCAGCCGGGCCAAAGATGCCTGGCTGCAGGGGCGG CTGGCCGAAGTACTGCCGGTGCCGTATGCGCACCTGGTGTTTACTTTGCCGCACAGCCTGAACGGTTTGTACGGGGCCCA TCCGCGCTGGGTGATCGATACGCTGTTTCGTTGCACGGCACAGACCCTGAGCGAATTTGCTGCCAACCCCCGATGGATGG GCCGCGTAGACGGCACGCCGGCCTTCAGCTTGGTGCTGCACACCTGGACGCAGGATTTGCGCCGGCACATCCACGTGCAT GCGGTGATGGCCTGCGGGGTACTGGACCCAGAAGGCGCGGGGCAATGGGCTACACCCGTACGCCAGCCCGACTTCCTGTT CCCGGTGCATGCACTGTCCACGGTGTTTCGCGGCAAGTTCCTGGCGGCGCTGGCGGCGGCGCATTGCGACAACCTGATCG AACACGATCCGCAAGGCAACGCCACCGATTGGAACGAGCGGCACCGGCAGCTGTACCGCCACCACTGGGTGGTGTATGCC AAGACGCCGCTGGGCGGCCCGGCCCAGGTGCTGGAGTACTTGAGCCGCTACACGCATCGCACGGCGATCAGCAACGCGCG CATCCGCGCCGTGACTCCTGACGCGGTGGCGTTCACGGTGCGTGCCGATGACAAGGGCGGCAAACATCTGCTACGCCTGC CGGGTGCGGAGTTTGTGCGCCGCTTCCTGCTGCATGTGCTGCCCACCGGGGTCAAGCGCATCCGGCATTACGGGGTGCTG GCTGCCAGCTGCAAAGGGGTCAAGCTGGAGGCTGCACGCCAGGCGCTGCAGATGCCTGCGCGTAACCGAGAAGCGGCCGA GTCGGCGAAGGACTTCATGGCGCGGGTGGCCCAGCTGGACGTGCTGCTGTGCCCGTGTTGCAAGCTGGGGCGCATGCGCG TCACGGCAGGACTACAGGGACAGCAGTCGCTGCCAGCGCCCAGTCGCACGGGGCAGGTAGATTGCAGAGGGCCACCGTGA
Upstream 100 bases:
>100_bases TCTGCACCTGATCAGCCCCCAGTTTCGACCACCCAAAGAACTCGATCCACTGGACTTGCTGGCCGCGCTGCGCCTGTTCT GAGATTGAGCCACCCCCGCC
Downstream 100 bases:
>100_bases CATGCCGGGCGGATGGGTTCTGGGGGGGGATTTACAGGGCACTTTGCTTGGTGTTCGGGGCAGCGCTGTGGGCGACAAAG GACGGCATCTGCAAGGGGGC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MATLADALRQHGAAYLATHSLSTPQAKAWRGIVACRTAALGGQQLACDACGHSHWQYHSCRNRHCPQCGSRAKDAWLQGR LAEVLPVPYAHLVFTLPHSLNGLYGAHPRWVIDTLFRCTAQTLSEFAANPRWMGRVDGTPAFSLVLHTWTQDLRRHIHVH AVMACGVLDPEGAGQWATPVRQPDFLFPVHALSTVFRGKFLAALAAAHCDNLIEHDPQGNATDWNERHRQLYRHHWVVYA KTPLGGPAQVLEYLSRYTHRTAISNARIRAVTPDAVAFTVRADDKGGKHLLRLPGAEFVRRFLLHVLPTGVKRIRHYGVL AASCKGVKLEAARQALQMPARNREAAESAKDFMARVAQLDVLLCPCCKLGRMRVTAGLQGQQSLPAPSRTGQVDCRGPP
Sequences:
>Translated_399_residues MATLADALRQHGAAYLATHSLSTPQAKAWRGIVACRTAALGGQQLACDACGHSHWQYHSCRNRHCPQCGSRAKDAWLQGR LAEVLPVPYAHLVFTLPHSLNGLYGAHPRWVIDTLFRCTAQTLSEFAANPRWMGRVDGTPAFSLVLHTWTQDLRRHIHVH AVMACGVLDPEGAGQWATPVRQPDFLFPVHALSTVFRGKFLAALAAAHCDNLIEHDPQGNATDWNERHRQLYRHHWVVYA KTPLGGPAQVLEYLSRYTHRTAISNARIRAVTPDAVAFTVRADDKGGKHLLRLPGAEFVRRFLLHVLPTGVKRIRHYGVL AASCKGVKLEAARQALQMPARNREAAESAKDFMARVAQLDVLLCPCCKLGRMRVTAGLQGQQSLPAPSRTGQVDCRGPP >Mature_398_residues ATLADALRQHGAAYLATHSLSTPQAKAWRGIVACRTAALGGQQLACDACGHSHWQYHSCRNRHCPQCGSRAKDAWLQGRL AEVLPVPYAHLVFTLPHSLNGLYGAHPRWVIDTLFRCTAQTLSEFAANPRWMGRVDGTPAFSLVLHTWTQDLRRHIHVHA VMACGVLDPEGAGQWATPVRQPDFLFPVHALSTVFRGKFLAALAAAHCDNLIEHDPQGNATDWNERHRQLYRHHWVVYAK TPLGGPAQVLEYLSRYTHRTAISNARIRAVTPDAVAFTVRADDKGGKHLLRLPGAEFVRRFLLHVLPTGVKRIRHYGVLA ASCKGVKLEAARQALQMPARNREAAESAKDFMARVAQLDVLLCPCCKLGRMRVTAGLQGQQSLPAPSRTGQVDCRGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 44057; Mature: 43926
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLADALRQHGAAYLATHSLSTPQAKAWRGIVACRTAALGGQQLACDACGHSHWQYHSC CCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHH RNRHCPQCGSRAKDAWLQGRLAEVLPVPYAHLVFTLPHSLNGLYGAHPRWVIDTLFRCTA CCCCCCCCCCHHHHHHHHCHHHHHCCCCHHHHHEECCHHCCCCCCCCCHHHHHHHHHHHH QTLSEFAANPRWMGRVDGTPAFSLVLHTWTQDLRRHIHVHAVMACGVLDPEGAGQWATPV HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RQPDFLFPVHALSTVFRGKFLAALAAAHCDNLIEHDPQGNATDWNERHRQLYRHHWVVYA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEE KTPLGGPAQVLEYLSRYTHRTAISNARIRAVTPDAVAFTVRADDKGGKHLLRLPGAEFVR ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCEEEECCCHHHHH RFLLHVLPTGVKRIRHYGVLAASCKGVKLEAARQALQMPARNREAAESAKDFMARVAQLD HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VLLCPCCKLGRMRVTAGLQGQQSLPAPSRTGQVDCRGPP HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATLADALRQHGAAYLATHSLSTPQAKAWRGIVACRTAALGGQQLACDACGHSHWQYHSC CHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHH RNRHCPQCGSRAKDAWLQGRLAEVLPVPYAHLVFTLPHSLNGLYGAHPRWVIDTLFRCTA CCCCCCCCCCHHHHHHHHCHHHHHCCCCHHHHHEECCHHCCCCCCCCCHHHHHHHHHHHH QTLSEFAANPRWMGRVDGTPAFSLVLHTWTQDLRRHIHVHAVMACGVLDPEGAGQWATPV HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RQPDFLFPVHALSTVFRGKFLAALAAAHCDNLIEHDPQGNATDWNERHRQLYRHHWVVYA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEE KTPLGGPAQVLEYLSRYTHRTAISNARIRAVTPDAVAFTVRADDKGGKHLLRLPGAEFVR ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCEEEECCCHHHHH RFLLHVLPTGVKRIRHYGVLAASCKGVKLEAARQALQMPARNREAAESAKDFMARVAQLD HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VLLCPCCKLGRMRVTAGLQGQQSLPAPSRTGQVDCRGPP HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]