| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787461
Identifier: 91787461
GI number: 91787461
Start: 1624467
End: 1625153
Strand: Direct
Name: 91787461
Synonym: Bpro_1575
Alternate gene names: NA
Gene position: 1624467-1625153 (Clockwise)
Preceding gene: 91787460
Following gene: 91787462
Centisome position: 31.24
GC content: 62.45
Gene sequence:
>687_bases ATGAACTTCCAAAAAATCAAATCCCGGATGGCGCTGGTGCTGGCACTGGTCTCTTTGTGCAGCGCTGCCTTCCTGCTGCC CGCTGGTCAGGTCTGGGCGCAGGAGTTTCCATCCAAGCCCATCAAGTTCATCAAGTTCATCGTGCCCTTCCCACCCGGTA GCGGCACCGACACCTCGGCACGCTACTTCGGCAAAAAACTCGGCGAACTGACCGGTCAGCCCGTGGTGGTCGAAAACCGC CCGGGTGCCAACGGCTTTATCGCGGCAAAGGCCTTGCTCAGCGCGCCCGCCGACGGTTACATCGTCTTTGTCGGTAGCAA TTCGTCGCTGGCCGTCAACGTGGCCTTGTTCAAGAAGCTGCCCTACGACCCGCAGACCGACATGGCGCCATTGACCATGA TGATGCGCGCACCCACCGTGCTCGTGGTGCCGCCCAACTCCCCGTACAAAACCCTGGCTGATCTGATCGGCGCGGCCAAG GCCCAGCCCGGCAAGTTCAACTACGCGGCGGGCTCCGCAGGCTATCAGCTGATGTTGGAGGCATTGAACGATAGCGCGCA CCTGGACATCCGCAACGTCCCCTTCAAGGGCGCCTCCGAAGCCTTGATCGCCATCGCCTCGGGAAGCGTGGACATGGCCG CTGCATCGCCGCGCGCCACCCCAAGTGGGACGAACGCCCGCTGCTGA
Upstream 100 bases:
>100_bases GGCTTACTGGAACACGCTGGTCGGCCACCATGTGCTCGCCAGCGAGCTGTCGCTGTCGGATTTCGTCCGTACGATTTAAG CTTTATCCCCAGGAGACAAA
Downstream 100 bases:
>100_bases TCGTGGTCAAGAAGCCCGGCGCGGAGTTGACCCGCGACGAGCTGCTGGCCTTCTACGACGGCAAGATCGCCAAGTGGTGG ACGCCCGATGATGTGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNFQKIKSRMALVLALVSLCSAAFLLPAGQVWAQEFPSKPIKFIKFIVPFPPGSGTDTSARYFGKKLGELTGQPVVVENR PGANGFIAAKALLSAPADGYIVFVGSNSSLAVNVALFKKLPYDPQTDMAPLTMMMRAPTVLVVPPNSPYKTLADLIGAAK AQPGKFNYAAGSAGYQLMLEALNDSAHLDIRNVPFKGASEALIAIASGSVDMAAASPRATPSGTNARC
Sequences:
>Translated_228_residues MNFQKIKSRMALVLALVSLCSAAFLLPAGQVWAQEFPSKPIKFIKFIVPFPPGSGTDTSARYFGKKLGELTGQPVVVENR PGANGFIAAKALLSAPADGYIVFVGSNSSLAVNVALFKKLPYDPQTDMAPLTMMMRAPTVLVVPPNSPYKTLADLIGAAK AQPGKFNYAAGSAGYQLMLEALNDSAHLDIRNVPFKGASEALIAIASGSVDMAAASPRATPSGTNARC >Mature_228_residues MNFQKIKSRMALVLALVSLCSAAFLLPAGQVWAQEFPSKPIKFIKFIVPFPPGSGTDTSARYFGKKLGELTGQPVVVENR PGANGFIAAKALLSAPADGYIVFVGSNSSLAVNVALFKKLPYDPQTDMAPLTMMMRAPTVLVVPPNSPYKTLADLIGAAK AQPGKFNYAAGSAGYQLMLEALNDSAHLDIRNVPFKGASEALIAIASGSVDMAAASPRATPSGTNARC
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 23919; Mature: 23919
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQKIKSRMALVLALVSLCSAAFLLPAGQVWAQEFPSKPIKFIKFIVPFPPGSGTDTSA CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHH RYFGKKLGELTGQPVVVENRPGANGFIAAKALLSAPADGYIVFVGSNSSLAVNVALFKKL HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHC PYDPQTDMAPLTMMMRAPTVLVVPPNSPYKTLADLIGAAKAQPGKFNYAAGSAGYQLMLE CCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH ALNDSAHLDIRNVPFKGASEALIAIASGSVDMAAASPRATPSGTNARC HHCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNFQKIKSRMALVLALVSLCSAAFLLPAGQVWAQEFPSKPIKFIKFIVPFPPGSGTDTSA CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHH RYFGKKLGELTGQPVVVENRPGANGFIAAKALLSAPADGYIVFVGSNSSLAVNVALFKKL HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHC PYDPQTDMAPLTMMMRAPTVLVVPPNSPYKTLADLIGAAKAQPGKFNYAAGSAGYQLMLE CCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH ALNDSAHLDIRNVPFKGASEALIAIASGSVDMAAASPRATPSGTNARC HHCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]