| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is thlA [H]
Identifier: 91787462
GI number: 91787462
Start: 1625827
End: 1627011
Strand: Direct
Name: thlA [H]
Synonym: Bpro_1577
Alternate gene names: 91787462
Gene position: 1625827-1627011 (Clockwise)
Preceding gene: 91787461
Following gene: 91787463
Centisome position: 31.26
GC content: 66.41
Gene sequence:
>1185_bases ATGTCACGTGAAGTTGTTGTAGTCAGCGGTGTACGCACCGCCATTGGTACCTATGGCGGCAGCCTGAAGGATATTTCCCC CACCGAACTGGCCGCGCAGGTTGTGCGCGAATCACTGGCGCGCGCCGGCGTCGAGGGGAGCGACGTGGGCCATGTGGTGT TTGGCCATGTGGTCAATACCGAGCCCAAAGACATGTACCTGTCGCGCGTCGCCGCCATCAACGGCGGCTGCGCCGAGGGT ACGCCGGCGTTCAATGTCAACCGCCTGTGCGGCTCCGGCCTGCAGGCCATCATTTCGGCCAGCCAGTCCATTTTGCTGGG CGATACCGACGTGGCCATCGGCGGCGGCGCCGAGAACATGAGCCGCGGCCCCTATGCCAGCCTGTCGGCGCGCTGGGGCG CCCGCATGGGTGACAGCACGATGGTCGACATGGTGGTGGGCGCGCTGCACGACCCCTTCCAGAAAATTCACATGGGCGTG ACCGCCGAGAACATCGCCGCCAAGTGGGGCATCAGCCGTGAAGAGCAGGACGCGATTGCCGTCGAAAGCCACAACCGCGC CCAGCGCGCCACCGAGGCCGGTTACTTCAAGGACCAGATCGTCCCCGTCATGCTGAAAAGCAAAAAGGGCGAGGTGGCCT ACGTCACCGACGAGCATTTCCGTGCCGGCTGCACGCTGGCCGACATGGCCAAGCTCAAACCGGTGTTCATCAAGGAAAAC GGCACCGTCACCGCCGGCAACGCCTCCGGCATCAACGACGCGGCCGCCGCCGTGGTGCTGATGGAAGCCGGCACCGCCAA GGCCCGCGGCGCCAAGCCGCTGGCCCGCCTGGTGGCCTACGCCCACGCCGGCGTGGACCCCCAGTACATGGGCATTGGCC CGGTGCCCGCCACGCGACTGGCGCTGAAAAAGGCCGGCCTCACGGTGAACGACCTGGACGTGATCGAGGCCAACGAAGCC TTTGCCGCCCAGGCCTGCGCCGTCACGCGCGAGCTGGGGCTGGACCCGGCCAAGGTCAACCCCAACGGCTCGGGCATCTC GCTGGGCCACCCGATTGGCGCCACCGGCGCGCTGATCACGGTGAAAGCCCTGTACGAGCTGCAGCGCATCGGGGGCCGCT ACGCGCTGGTAACGATGTGCATAGGCGGCGGTCAGGGCATTGCGGCGATTTTTGAGCGGATGTAA
Upstream 100 bases:
>100_bases TTCCGCGCTGTCCAGCCAGCATGGAGCAGCATTGAGCTGATGCCCATGAGCCGCAAAATTCGATAGAACCAATTCTTTCA TCTAACCGGAGAAACGAGCC
Downstream 100 bases:
>100_bases GGGCGGTGGGCGCGTCCGTGCCAGCTGAGAAATCGAACCCATGAGGCAACAACCCGATCCATGGGGCGAACTTTTTCTGA CAAACCGACTTGATTTCAGC
Product: beta-ketothiolase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSREVVVVSGVRTAIGTYGGSLKDISPTELAAQVVRESLARAGVEGSDVGHVVFGHVVNTEPKDMYLSRVAAINGGCAEG TPAFNVNRLCGSGLQAIISASQSILLGDTDVAIGGGAENMSRGPYASLSARWGARMGDSTMVDMVVGALHDPFQKIHMGV TAENIAAKWGISREEQDAIAVESHNRAQRATEAGYFKDQIVPVMLKSKKGEVAYVTDEHFRAGCTLADMAKLKPVFIKEN GTVTAGNASGINDAAAAVVLMEAGTAKARGAKPLARLVAYAHAGVDPQYMGIGPVPATRLALKKAGLTVNDLDVIEANEA FAAQACAVTRELGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGIAAIFERM
Sequences:
>Translated_394_residues MSREVVVVSGVRTAIGTYGGSLKDISPTELAAQVVRESLARAGVEGSDVGHVVFGHVVNTEPKDMYLSRVAAINGGCAEG TPAFNVNRLCGSGLQAIISASQSILLGDTDVAIGGGAENMSRGPYASLSARWGARMGDSTMVDMVVGALHDPFQKIHMGV TAENIAAKWGISREEQDAIAVESHNRAQRATEAGYFKDQIVPVMLKSKKGEVAYVTDEHFRAGCTLADMAKLKPVFIKEN GTVTAGNASGINDAAAAVVLMEAGTAKARGAKPLARLVAYAHAGVDPQYMGIGPVPATRLALKKAGLTVNDLDVIEANEA FAAQACAVTRELGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGIAAIFERM >Mature_393_residues SREVVVVSGVRTAIGTYGGSLKDISPTELAAQVVRESLARAGVEGSDVGHVVFGHVVNTEPKDMYLSRVAAINGGCAEGT PAFNVNRLCGSGLQAIISASQSILLGDTDVAIGGGAENMSRGPYASLSARWGARMGDSTMVDMVVGALHDPFQKIHMGVT AENIAAKWGISREEQDAIAVESHNRAQRATEAGYFKDQIVPVMLKSKKGEVAYVTDEHFRAGCTLADMAKLKPVFIKENG TVTAGNASGINDAAAAVVLMEAGTAKARGAKPLARLVAYAHAGVDPQYMGIGPVPATRLALKKAGLTVNDLDVIEANEAF AAQACAVTRELGLDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGIAAIFERM
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=394, Percent_Identity=45.4314720812183, Blast_Score=348, Evalue=4e-96, Organism=Homo sapiens, GI167614485, Length=391, Percent_Identity=45.2685421994885, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI4557237, Length=394, Percent_Identity=40.3553299492386, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI4501853, Length=400, Percent_Identity=41, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI4504327, Length=425, Percent_Identity=36, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI194353979, Length=392, Percent_Identity=30.3571428571429, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=45.6632653061224, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI1787663, Length=402, Percent_Identity=46.2686567164179, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI1788554, Length=398, Percent_Identity=45.9798994974874, Blast_Score=316, Evalue=1e-87, Organism=Escherichia coli, GI48994986, Length=397, Percent_Identity=40.0503778337531, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1788683, Length=413, Percent_Identity=34.3825665859564, Blast_Score=207, Evalue=1e-54, Organism=Caenorhabditis elegans, GI133906874, Length=391, Percent_Identity=46.0358056265985, Blast_Score=347, Evalue=4e-96, Organism=Caenorhabditis elegans, GI17535921, Length=396, Percent_Identity=35.1010101010101, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI25147385, Length=394, Percent_Identity=34.010152284264, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17551802, Length=423, Percent_Identity=30.4964539007092, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17535917, Length=400, Percent_Identity=27.5, Blast_Score=141, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6325229, Length=399, Percent_Identity=37.844611528822, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6322031, Length=403, Percent_Identity=34.7394540942928, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=45.4081632653061, Blast_Score=345, Evalue=3e-95, Organism=Drosophila melanogaster, GI17648125, Length=393, Percent_Identity=43.2569974554707, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI24640423, Length=397, Percent_Identity=38.5390428211587, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI17137578, Length=429, Percent_Identity=32.8671328671329, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24585051, Length=401, Percent_Identity=23.9401496259352, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40843; Mature: 40712
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS00098 THIOLASE_1 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREVVVVSGVRTAIGTYGGSLKDISPTELAAQVVRESLARAGVEGSDVGHVVFGHVVNT CCCCEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC EPKDMYLSRVAAINGGCAEGTPAFNVNRLCGSGLQAIISASQSILLGDTDVAIGGGAENM CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCC SRGPYASLSARWGARMGDSTMVDMVVGALHDPFQKIHMGVTAENIAAKWGISREEQDAIA CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCCEEE VESHNRAQRATEAGYFKDQIVPVMLKSKKGEVAYVTDEHFRAGCTLADMAKLKPVFIKEN EECCCHHHHHHHCCCHHHCCEEEEEECCCCCEEEEECCHHHCCCCHHHHHHCCEEEEECC GTVTAGNASGINDAAAAVVLMEAGTAKARGAKPLARLVAYAHAGVDPQYMGIGPVPATRL CEEEECCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHH ALKKAGLTVNDLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPIGATGALIT HHHHCCCEECCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCCCCCCCHHHH VKALYELQRIGGRYALVTMCIGGGQGIAAIFERM HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCC >Mature Secondary Structure SREVVVVSGVRTAIGTYGGSLKDISPTELAAQVVRESLARAGVEGSDVGHVVFGHVVNT CCCEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC EPKDMYLSRVAAINGGCAEGTPAFNVNRLCGSGLQAIISASQSILLGDTDVAIGGGAENM CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCC SRGPYASLSARWGARMGDSTMVDMVVGALHDPFQKIHMGVTAENIAAKWGISREEQDAIA CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCCEEE VESHNRAQRATEAGYFKDQIVPVMLKSKKGEVAYVTDEHFRAGCTLADMAKLKPVFIKEN EECCCHHHHHHHCCCHHHCCEEEEEECCCCCEEEEECCHHHCCCCHHHHHHCCEEEEECC GTVTAGNASGINDAAAAVVLMEAGTAKARGAKPLARLVAYAHAGVDPQYMGIGPVPATRL CEEEECCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHH ALKKAGLTVNDLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPIGATGALIT HHHHCCCEECCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCCCCCCCHHHH VKALYELQRIGGRYALVTMCIGGGQGIAAIFERM HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]