| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787451
Identifier: 91787451
GI number: 91787451
Start: 1612196
End: 1613806
Strand: Reverse
Name: 91787451
Synonym: Bpro_1561
Alternate gene names: NA
Gene position: 1613806-1612196 (Counterclockwise)
Preceding gene: 91787467
Following gene: 91787442
Centisome position: 31.03
GC content: 60.96
Gene sequence:
>1611_bases ATGACATCCTTCGACAACACACTCCCCTCCGATCCGATAGGGGCCGCTTGGCTGGCCAGGGAGTTCGATACCCTGCCCAT GGGCCGATTCCCTGTCCTGAGTCAGGTTGGCAGCCGACGTGCGAGCCAGGTCGCAGATGGATTCCGAGTTGAAACATATC CGGAGGTTATGCGTCCCGGGGCGGACCCTGCGTCGCACCTGCAGTTTCACCTGCGTCATGAGGTGATGCACCTGGAGTTC CTCGCCCGCGTTTTCCCGAAGACTGGGCCGGCGCCAGTACAGGGTTGGATCATCGCAGAGCCTACCGGGCAGTACGCTCG ACGCGCCGCTTTTCTCTATGAGTGGCTCACAGGGGAGCAACTGCAGGTCCCCGAGCGACTGGGAGGCAACTACGTTGACG CGATCGACGGCGACGTGATGTTGGCCGCCTCCCCAGAGAAGATCGTCAAGGTTAGTCGGTGGCGGATCAACGACAACCTG CCGGGCTCTAGGTTTTTTTGCCCAACTGTCGCGAAAACGGATGCATTGAACGCGGCCGCGGCGCTCGATGTCCGGGCGCT GTTCAAGGAGCTCACGAATGAGTTTGGCGAGGAACTGCTGCTGCGTGCGGCCGCATGGATGACCCTGCGCGAGAGCAGGG CCAGCTTCACCATCGAGGGTGAGGCTGACCGCGGAACCAGGATCCAGCGCTTCGCGGATGTCATGGCCCGCCGCACTGGC CAGGGGGAATTGCCCCTGACAGATGGCGCCCTGGCTGAGCTGCAGCGTGAAATCCTTGGACCGGTGACCACACTTACTCG CCTCGGCATTCGGCAATCACCTGTCTTCGTCGGAGAGACAGTCCGGTACCAAGAAGTGGTGCACTATGTCGCTCCGCCGG ATTCAGACCTGCGAGACATGCTGGAAGGCCTGCGCGTCTTCCTAGACCGCACCCAAGGGCAGTCCTCTGTCCTGCGCAGC GCTGTGGCGGCCTTTGCCTTCGTCTACATCCACCCGATGGCCGATGGCAATGGGCGTGTGCATCGATTTCTGATCAATGA CATCCTGCGCCGGGATGGCGTCATTCCGGAGCCTGTGATCTTGCCTGTGTCAGCCGTCATCACCGCCGACGCCGGCGAAC GACGCTCCTATGACCAGGTACTCGACCAGGTGTCCCAGCCCTTGATGCAGTCCATCCGTGACCAAGTGGAATTTGCCAAG GTCCACACACCATACCCCGATGGAGTTGTCTCGAATTTCGTTTTCAATGCCCCGGATATGGCTCGGCCGATCTGGCGCTA TCCCGATATGAGCCCGCACATCGTCTATATGTCCAGGGTGATCGCGCGCACCATCTCTGAGCAGATGCGTGAGGAATCTA AATACCTGAGTGGCCACCATCGTGCGCGGGAAGCGATCAAGGAGGTCGTCGAGATGCCAGATCACCAGGCTGACCGGCTC CTGCGTTCCATGGAGCAGAACGAGGGCCGGTTGAGCAACGCGCTGGCCAAGGAAATGCCGGTGCTGACGCAACCTGGCAT CTGGGAGGCTATCGCCGATGCGGTGAATCAGGCGTTCAAGGGCGATGAGCCGCTGGATAACAGTGTGACCAGCCGGTACA GGCCGAAGTAG
Upstream 100 bases:
>100_bases AAAATGGCAATAAATAATCATTTTTTTACAGCCGCAATTCACTACACCTCACCAAACGTCACCGGTAATCATTTTTGAGC AAACCGGAGTCGGTACCTCA
Downstream 100 bases:
>100_bases ATGCGCACGAAACCGGTGCCATAGGTCAAAGCGGCACAGGGTCCAAAGATGAGCCGCCGCTGGTCGGTCGGTGCTTGATT GGCCAAGCACTCACTTCGAA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Filamentation Induced By CAMP; Filamentation Induced By CAMP Protein
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MTSFDNTLPSDPIGAAWLAREFDTLPMGRFPVLSQVGSRRASQVADGFRVETYPEVMRPGADPASHLQFHLRHEVMHLEF LARVFPKTGPAPVQGWIIAEPTGQYARRAAFLYEWLTGEQLQVPERLGGNYVDAIDGDVMLAASPEKIVKVSRWRINDNL PGSRFFCPTVAKTDALNAAAALDVRALFKELTNEFGEELLLRAAAWMTLRESRASFTIEGEADRGTRIQRFADVMARRTG QGELPLTDGALAELQREILGPVTTLTRLGIRQSPVFVGETVRYQEVVHYVAPPDSDLRDMLEGLRVFLDRTQGQSSVLRS AVAAFAFVYIHPMADGNGRVHRFLINDILRRDGVIPEPVILPVSAVITADAGERRSYDQVLDQVSQPLMQSIRDQVEFAK VHTPYPDGVVSNFVFNAPDMARPIWRYPDMSPHIVYMSRVIARTISEQMREESKYLSGHHRAREAIKEVVEMPDHQADRL LRSMEQNEGRLSNALAKEMPVLTQPGIWEAIADAVNQAFKGDEPLDNSVTSRYRPK
Sequences:
>Translated_536_residues MTSFDNTLPSDPIGAAWLAREFDTLPMGRFPVLSQVGSRRASQVADGFRVETYPEVMRPGADPASHLQFHLRHEVMHLEF LARVFPKTGPAPVQGWIIAEPTGQYARRAAFLYEWLTGEQLQVPERLGGNYVDAIDGDVMLAASPEKIVKVSRWRINDNL PGSRFFCPTVAKTDALNAAAALDVRALFKELTNEFGEELLLRAAAWMTLRESRASFTIEGEADRGTRIQRFADVMARRTG QGELPLTDGALAELQREILGPVTTLTRLGIRQSPVFVGETVRYQEVVHYVAPPDSDLRDMLEGLRVFLDRTQGQSSVLRS AVAAFAFVYIHPMADGNGRVHRFLINDILRRDGVIPEPVILPVSAVITADAGERRSYDQVLDQVSQPLMQSIRDQVEFAK VHTPYPDGVVSNFVFNAPDMARPIWRYPDMSPHIVYMSRVIARTISEQMREESKYLSGHHRAREAIKEVVEMPDHQADRL LRSMEQNEGRLSNALAKEMPVLTQPGIWEAIADAVNQAFKGDEPLDNSVTSRYRPK >Mature_535_residues TSFDNTLPSDPIGAAWLAREFDTLPMGRFPVLSQVGSRRASQVADGFRVETYPEVMRPGADPASHLQFHLRHEVMHLEFL ARVFPKTGPAPVQGWIIAEPTGQYARRAAFLYEWLTGEQLQVPERLGGNYVDAIDGDVMLAASPEKIVKVSRWRINDNLP GSRFFCPTVAKTDALNAAAALDVRALFKELTNEFGEELLLRAAAWMTLRESRASFTIEGEADRGTRIQRFADVMARRTGQ GELPLTDGALAELQREILGPVTTLTRLGIRQSPVFVGETVRYQEVVHYVAPPDSDLRDMLEGLRVFLDRTQGQSSVLRSA VAAFAFVYIHPMADGNGRVHRFLINDILRRDGVIPEPVILPVSAVITADAGERRSYDQVLDQVSQPLMQSIRDQVEFAKV HTPYPDGVVSNFVFNAPDMARPIWRYPDMSPHIVYMSRVIARTISEQMREESKYLSGHHRAREAIKEVVEMPDHQADRLL RSMEQNEGRLSNALAKEMPVLTQPGIWEAIADAVNQAFKGDEPLDNSVTSRYRPK
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60113; Mature: 59982
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFDNTLPSDPIGAAWLAREFDTLPMGRFPVLSQVGSRRASQVADGFRVETYPEVMRPG CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC ADPASHLQFHLRHEVMHLEFLARVFPKTGPAPVQGWIIAEPTGQYARRAAFLYEWLTGEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC LQVPERLGGNYVDAIDGDVMLAASPEKIVKVSRWRINDNLPGSRFFCPTVAKTDALNAAA EECHHHHCCCEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHH ALDVRALFKELTNEFGEELLLRAAAWMTLRESRASFTIEGEADRGTRIQRFADVMARRTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCC QGELPLTDGALAELQREILGPVTTLTRLGIRQSPVFVGETVRYQEVVHYVAPPDSDLRDM CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH LEGLRVFLDRTQGQSSVLRSAVAAFAFVYIHPMADGNGRVHRFLINDILRRDGVIPEPVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH LPVSAVITADAGERRSYDQVLDQVSQPLMQSIRDQVEFAKVHTPYPDGVVSNFVFNAPDM CCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH ARPIWRYPDMSPHIVYMSRVIARTISEQMREESKYLSGHHRAREAIKEVVEMPDHQADRL HCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LRSMEQNEGRLSNALAKEMPVLTQPGIWEAIADAVNQAFKGDEPLDNSVTSRYRPK HHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC >Mature Secondary Structure TSFDNTLPSDPIGAAWLAREFDTLPMGRFPVLSQVGSRRASQVADGFRVETYPEVMRPG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC ADPASHLQFHLRHEVMHLEFLARVFPKTGPAPVQGWIIAEPTGQYARRAAFLYEWLTGEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC LQVPERLGGNYVDAIDGDVMLAASPEKIVKVSRWRINDNLPGSRFFCPTVAKTDALNAAA EECHHHHCCCEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHH ALDVRALFKELTNEFGEELLLRAAAWMTLRESRASFTIEGEADRGTRIQRFADVMARRTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCC QGELPLTDGALAELQREILGPVTTLTRLGIRQSPVFVGETVRYQEVVHYVAPPDSDLRDM CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH LEGLRVFLDRTQGQSSVLRSAVAAFAFVYIHPMADGNGRVHRFLINDILRRDGVIPEPVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH LPVSAVITADAGERRSYDQVLDQVSQPLMQSIRDQVEFAKVHTPYPDGVVSNFVFNAPDM CCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH ARPIWRYPDMSPHIVYMSRVIARTISEQMREESKYLSGHHRAREAIKEVVEMPDHQADRL HCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LRSMEQNEGRLSNALAKEMPVLTQPGIWEAIADAVNQAFKGDEPLDNSVTSRYRPK HHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA