| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787442
Identifier: 91787442
GI number: 91787442
Start: 1603328
End: 1603681
Strand: Reverse
Name: 91787442
Synonym: Bpro_1552
Alternate gene names: NA
Gene position: 1603681-1603328 (Counterclockwise)
Preceding gene: 91787451
Following gene: 91787441
Centisome position: 30.84
GC content: 57.34
Gene sequence:
>354_bases ATGGCAGATGCAAGCCCCGATAAAGTTCGCGTTCGCTTTATTGTCGATAGCGACACCCCGGAGTTGTTGAAGCGGTTGGC TAGTGCAAAGCGTCGGTCGCGCGAGATTGTTTACCTGCTGCGACTTGGGTTGCAAATGGAAATGAGGCTCAACGGCAAGG TGCCCATGGTTGACCATGCTTCAGCGGAGAGCGCACCGCCATCGAATCAGGCTCCCGCGCCGGCGGCACCCGTACCTGCA CCGGTTTCAGGGACGAGTACCCCTGCTGATATTCCGTTTGGCGGTGACTTCGCAGCTATAACTGGATTGGACGCCGACTA CTTTGCGGGTGCGCCAATCGCCTACTCTGAATAG
Upstream 100 bases:
>100_bases GGTGGACGTTCGCGCCGTGGACGTAGGCTACTTTTCTACCCAACTGACTCTGGGCCGTAAGCTGGCGGGTTACGCCAGCA CTATTGCTACCGCATGAGCC
Downstream 100 bases:
>100_bases GAGTGAATCTGAGTTCAAATGCAGAAGTGGCCGGATATTCCGGTCATTTTTTTGCGTGTCGAAAGACGTGAATCGTGACC GAGACTGGCCTACGCAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MADASPDKVRVRFIVDSDTPELLKRLASAKRRSREIVYLLRLGLQMEMRLNGKVPMVDHASAESAPPSNQAPAPAAPVPA PVSGTSTPADIPFGGDFAAITGLDADYFAGAPIAYSE
Sequences:
>Translated_117_residues MADASPDKVRVRFIVDSDTPELLKRLASAKRRSREIVYLLRLGLQMEMRLNGKVPMVDHASAESAPPSNQAPAPAAPVPA PVSGTSTPADIPFGGDFAAITGLDADYFAGAPIAYSE >Mature_116_residues ADASPDKVRVRFIVDSDTPELLKRLASAKRRSREIVYLLRLGLQMEMRLNGKVPMVDHASAESAPPSNQAPAPAAPVPAP VSGTSTPADIPFGGDFAAITGLDADYFAGAPIAYSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12351; Mature: 12220
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADASPDKVRVRFIVDSDTPELLKRLASAKRRSREIVYLLRLGLQMEMRLNGKVPMVDHA CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCHHHHEEECCCCEEEEEECCCCCCEECC SAESAPPSNQAPAPAAPVPAPVSGTSTPADIPFGGDFAAITGLDADYFAGAPIAYSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCC >Mature Secondary Structure ADASPDKVRVRFIVDSDTPELLKRLASAKRRSREIVYLLRLGLQMEMRLNGKVPMVDHA CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCHHHHEEECCCCEEEEEECCCCCCEECC SAESAPPSNQAPAPAAPVPAPVSGTSTPADIPFGGDFAAITGLDADYFAGAPIAYSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA