| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787429
Identifier: 91787429
GI number: 91787429
Start: 1591093
End: 1591620
Strand: Reverse
Name: 91787429
Synonym: Bpro_1539
Alternate gene names: NA
Gene position: 1591620-1591093 (Counterclockwise)
Preceding gene: 91787430
Following gene: 91787426
Centisome position: 30.61
GC content: 54.55
Gene sequence:
>528_bases ATGCGAAATCAAGACTTGAACAATTCTGCCTCTCCTTTACTTGATGGCCTCAGAGTCGAGGCGGCGCGAATTGAGGAGGA CACCGAGCACTCGGCAAAGCGTCACTTTAACTCCTGCGAGTTATGGTCAAAGCTGCATTACGGGCTCGGAATTCCCGCGA CGATAGCCGCTGCGGCCGCGAGCGCGGCCGTCGTCAAGGAAGCACCTTTAGCTGCACAGCTTTTAGCGCTGACCGCAGCT CTTTTAACTGCCTTGATGACATTTCTGAAGCCCAACGACAAGGCCTTGCAGCACAAGAATGTGGGAAATCAATATCTTGC ATTGCGCAACGACTCACGAATGTTCAGAGAGTTGGAGCTGCGTAAGCCGATCGATGACGGCAAAAAAAGTGAACAGCTTG ATCGACTGGCTCAGCGGCGCAACGAATTGAATAGCGCTGCGCCCTCCACCTCGCGGTGGGCTTTTGAACGGACCCGTAAG GGTATTGCCGAGGGCGAAACGCGCTATCAGGTCGATCAGCGCGACTGA
Upstream 100 bases:
>100_bases TCTGGTGCAAAACTGGCGAGTGGGCTGGTGGTGGTGAGCACCCCGTCAAAAAAGTCAAACGCTGGGCACGCTCTGAGTCG GTTTCAATTACCTAACTATC
Downstream 100 bases:
>100_bases GTCCGGGCGTGGAGTGAGCCCATCGTAGCCATAGAGGTCCCCAAAACGCTCTTTTGCAGACTACTCGCGGCCAAGGTTTT TGTTAATTTTGATCGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRNQDLNNSASPLLDGLRVEAARIEEDTEHSAKRHFNSCELWSKLHYGLGIPATIAAAAASAAVVKEAPLAAQLLALTAA LLTALMTFLKPNDKALQHKNVGNQYLALRNDSRMFRELELRKPIDDGKKSEQLDRLAQRRNELNSAAPSTSRWAFERTRK GIAEGETRYQVDQRD
Sequences:
>Translated_175_residues MRNQDLNNSASPLLDGLRVEAARIEEDTEHSAKRHFNSCELWSKLHYGLGIPATIAAAAASAAVVKEAPLAAQLLALTAA LLTALMTFLKPNDKALQHKNVGNQYLALRNDSRMFRELELRKPIDDGKKSEQLDRLAQRRNELNSAAPSTSRWAFERTRK GIAEGETRYQVDQRD >Mature_175_residues MRNQDLNNSASPLLDGLRVEAARIEEDTEHSAKRHFNSCELWSKLHYGLGIPATIAAAAASAAVVKEAPLAAQLLALTAA LLTALMTFLKPNDKALQHKNVGNQYLALRNDSRMFRELELRKPIDDGKKSEQLDRLAQRRNELNSAAPSTSRWAFERTRK GIAEGETRYQVDQRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19551; Mature: 19551
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNQDLNNSASPLLDGLRVEAARIEEDTEHSAKRHFNSCELWSKLHYGLGIPATIAAAAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH SAAVVKEAPLAAQLLALTAALLTALMTFLKPNDKALQHKNVGNQYLALRNDSRMFRELEL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCHHHHHHHHHH RKPIDDGKKSEQLDRLAQRRNELNSAAPSTSRWAFERTRKGIAEGETRYQVDQRD HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MRNQDLNNSASPLLDGLRVEAARIEEDTEHSAKRHFNSCELWSKLHYGLGIPATIAAAAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH SAAVVKEAPLAAQLLALTAALLTALMTFLKPNDKALQHKNVGNQYLALRNDSRMFRELEL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCHHHHHHHHHH RKPIDDGKKSEQLDRLAQRRNELNSAAPSTSRWAFERTRKGIAEGETRYQVDQRD HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA