| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787408
Identifier: 91787408
GI number: 91787408
Start: 1570025
End: 1570726
Strand: Reverse
Name: 91787408
Synonym: Bpro_1514
Alternate gene names: NA
Gene position: 1570726-1570025 (Counterclockwise)
Preceding gene: 91787412
Following gene: 91787406
Centisome position: 30.2
GC content: 63.68
Gene sequence:
>702_bases ATGTATCCATCTTTCATGGCATTTTCCGCACATTTCCGCCCTCCTCTGCTGTCGGTTCGCCTTGGCATGGCGCTGCTCTT TGTGGCCTTGCTGGGTGGCTGCGCCAGTCCGATCACAACCAGGGTCACCAGCTTTAACCAGTGGCCCGCCGATGTGGCGG GCAGCACGTTCAGCTTCATCAGCCCCGTCGACACGAGCCGCGAGCTGGAACAGGCCACCTATGAAAGCCATGTGCAAGCC GCGCTTGAAAAGCAGGGCCTCAGGCGGGCACCGCCCGGGCAGGTGGGGCGCATCCAGGCCGAGGTGCTGGTGGGCAGCCA CAGCGAACAAAAAACCTGGCTGCAACCGGTTTACCAGGACCACCATGTTTTCTTGCCCCCGTACCGCGACGCAGCGGGGC GTGTGTTCCCGGGGGCCTGGGCGCCCGATCCGTTCGGGCCGCGTTATGTGGGCGACCGCCAGGTGAGCCGCACCATGCGG ATCAGCAACTTGCGCCTGCGCCTGCTGGACACACGGGGAAGCCCGCCGGGCAAGCCGCACACGGTGTTCGAGTCGCGGGC CAGTTATGAAGGCGACAGCGACGACCTGCCGGCACTGGTGCCTTACCTGGTGCGGGCGGTATTCGACGATTTTCCCGGCC AGAACGGGCGGACACGCAACGTGAGCTTTGACAGCGAAACCGGTGCGTTGATCAAAAAATAA
Upstream 100 bases:
>100_bases TAGCGTATTGACGCTGCCGAACGCCATGATCGAACGCTTCAGCACAGGGGGCCAACTTTACTTGAGAGCCATCCGCCGCG TGGAACAAAATTGAACCCCG
Downstream 100 bases:
>100_bases TCCCGCTACTCCTCTTAAGGCTGCGCCGGGTTGCCAGCGGCTCCGCGCTCCAGCGCGTGCCAGCCAAAGGGTTTCAGGTT TCAGGGGATCAGGGCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein; Exported Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MYPSFMAFSAHFRPPLLSVRLGMALLFVALLGGCASPITTRVTSFNQWPADVAGSTFSFISPVDTSRELEQATYESHVQA ALEKQGLRRAPPGQVGRIQAEVLVGSHSEQKTWLQPVYQDHHVFLPPYRDAAGRVFPGAWAPDPFGPRYVGDRQVSRTMR ISNLRLRLLDTRGSPPGKPHTVFESRASYEGDSDDLPALVPYLVRAVFDDFPGQNGRTRNVSFDSETGALIKK
Sequences:
>Translated_233_residues MYPSFMAFSAHFRPPLLSVRLGMALLFVALLGGCASPITTRVTSFNQWPADVAGSTFSFISPVDTSRELEQATYESHVQA ALEKQGLRRAPPGQVGRIQAEVLVGSHSEQKTWLQPVYQDHHVFLPPYRDAAGRVFPGAWAPDPFGPRYVGDRQVSRTMR ISNLRLRLLDTRGSPPGKPHTVFESRASYEGDSDDLPALVPYLVRAVFDDFPGQNGRTRNVSFDSETGALIKK >Mature_233_residues MYPSFMAFSAHFRPPLLSVRLGMALLFVALLGGCASPITTRVTSFNQWPADVAGSTFSFISPVDTSRELEQATYESHVQA ALEKQGLRRAPPGQVGRIQAEVLVGSHSEQKTWLQPVYQDHHVFLPPYRDAAGRVFPGAWAPDPFGPRYVGDRQVSRTMR ISNLRLRLLDTRGSPPGKPHTVFESRASYEGDSDDLPALVPYLVRAVFDDFPGQNGRTRNVSFDSETGALIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25787; Mature: 25787
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPSFMAFSAHFRPPLLSVRLGMALLFVALLGGCASPITTRVTSFNQWPADVAGSTFSFI CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCHHC SPVDTSRELEQATYESHVQAALEKQGLRRAPPGQVGRIQAEVLVGSHSEQKTWLQPVYQD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC HHVFLPPYRDAAGRVFPGAWAPDPFGPRYVGDRQVSRTMRISNLRLRLLDTRGSPPGKPH CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCC TVFESRASYEGDSDDLPALVPYLVRAVFDDFPGQNGRTRNVSFDSETGALIKK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MYPSFMAFSAHFRPPLLSVRLGMALLFVALLGGCASPITTRVTSFNQWPADVAGSTFSFI CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCHHC SPVDTSRELEQATYESHVQAALEKQGLRRAPPGQVGRIQAEVLVGSHSEQKTWLQPVYQD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC HHVFLPPYRDAAGRVFPGAWAPDPFGPRYVGDRQVSRTMRISNLRLRLLDTRGSPPGKPH CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCC TVFESRASYEGDSDDLPALVPYLVRAVFDDFPGQNGRTRNVSFDSETGALIKK HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA