| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is apaH [H]
Identifier: 91787412
GI number: 91787412
Start: 1574881
End: 1575735
Strand: Reverse
Name: apaH [H]
Synonym: Bpro_1518
Alternate gene names: 91787412
Gene position: 1575735-1574881 (Counterclockwise)
Preceding gene: 91787419
Following gene: 91787408
Centisome position: 30.3
GC content: 63.98
Gene sequence:
>855_bases ATGTCACTTTACTGTATCGGCGACCTGCAGGGTTGCAATGAGCCATTTCAGCGCCTGCTGGAGAAGATTGATTTCTCACC AAGCCGTGACACGCTGTACCTGCTGGGCGACCTGGTCAACCGCGGCCCGCACTCGCTGGCCGTGCTGCGCCACCTGAGCC ACTTGGGCGATGCCGCCCAGTCCCTGCTGGGCAACCACGATTTGCATTTGCTGGCCTTATGGCAAGGCATGGGCAAGCTG CACCGCAGCGATACCGCACAAGACATCCTGCAGGCCAGCGACCGCGGCGCCCTGCTGGAGTGGCTGCGTCATCGCAACAT GGCCATCCATGCGCATGGCTGGCTGATGGTGCATGCCGGTGTGCTGCCCCAGTGGAGCACCGCCAAAACCATGGCGCTGG CCGCCGAGGTGGAACAGGCCTTGCGCGGGCCCGATCTGAAGGGATTTTTACGCGATATGTATGGCAACACCCCTTGCGAG TGGCACGACAGCCTGCAGGGCGCGGACCGGCTTCGGGTGGTGGTCAATGCGCTGACGCGCCTGCGCTTTTGCACGCCGCA AGGGGTGATGGAGTTTGCCACCAAAGAAGGCGCAGAGGCGGCGCTACACGGCTACCTGCCATGGTTTGATGTGCCGGGCC GCCAAACCGCAGACACGCCGGTCATGTTTGGCCACTGGTCAGCGCTCAAGGCACAAGACGCCCAGAAATCGGGCAGCCTG CTGCTGCCGCTGGACACCGGCTGTGTCTGGGGCGGGAGCCTGACCGCCGCCAGGCTTGGGGCAACGCCAGCGGCGTATGA ACTGATCTCGGTGGCCTGCGCACAGGCGCAAAACCCCAAGGCAAAACCGGGCTGA
Upstream 100 bases:
>100_bases CTGGATGCCAGGGCCAGCTCGGACATGGCAAACACGCCGTTGAGCAAGGTTAAAAAAACGATCAGCAGGAAATCCATGAA TCCGGAGGGAGAATAAACAC
Downstream 100 bases:
>100_bases AACCGCAGCACTCAGGCCGTCATGCGGGGCTCAGCGGCCTGCGCAGATTGAACCTAGAAGCGGCAGTTGGATGCGTCCGA GTGCGTCGTGATCGGCGTGG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSLYCIGDLQGCNEPFQRLLEKIDFSPSRDTLYLLGDLVNRGPHSLAVLRHLSHLGDAAQSLLGNHDLHLLALWQGMGKL HRSDTAQDILQASDRGALLEWLRHRNMAIHAHGWLMVHAGVLPQWSTAKTMALAAEVEQALRGPDLKGFLRDMYGNTPCE WHDSLQGADRLRVVVNALTRLRFCTPQGVMEFATKEGAEAALHGYLPWFDVPGRQTADTPVMFGHWSALKAQDAQKSGSL LLPLDTGCVWGGSLTAARLGATPAAYELISVACAQAQNPKAKPG
Sequences:
>Translated_284_residues MSLYCIGDLQGCNEPFQRLLEKIDFSPSRDTLYLLGDLVNRGPHSLAVLRHLSHLGDAAQSLLGNHDLHLLALWQGMGKL HRSDTAQDILQASDRGALLEWLRHRNMAIHAHGWLMVHAGVLPQWSTAKTMALAAEVEQALRGPDLKGFLRDMYGNTPCE WHDSLQGADRLRVVVNALTRLRFCTPQGVMEFATKEGAEAALHGYLPWFDVPGRQTADTPVMFGHWSALKAQDAQKSGSL LLPLDTGCVWGGSLTAARLGATPAAYELISVACAQAQNPKAKPG >Mature_283_residues SLYCIGDLQGCNEPFQRLLEKIDFSPSRDTLYLLGDLVNRGPHSLAVLRHLSHLGDAAQSLLGNHDLHLLALWQGMGKLH RSDTAQDILQASDRGALLEWLRHRNMAIHAHGWLMVHAGVLPQWSTAKTMALAAEVEQALRGPDLKGFLRDMYGNTPCEW HDSLQGADRLRVVVNALTRLRFCTPQGVMEFATKEGAEAALHGYLPWFDVPGRQTADTPVMFGHWSALKAQDAQKSGSLL LPLDTGCVWGGSLTAARLGATPAAYELISVACAQAQNPKAKPG
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=260, Percent_Identity=41.5384615384615, Blast_Score=213, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 31027; Mature: 30896
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYCIGDLQGCNEPFQRLLEKIDFSPSRDTLYLLGDLVNRGPHSLAVLRHLSHLGDAAQ CCEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLLGNHDLHLLALWQGMGKLHRSDTAQDILQASDRGALLEWLRHRNMAIHAHGWLMVHAG HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCEEEEECC VLPQWSTAKTMALAAEVEQALRGPDLKGFLRDMYGNTPCEWHDSLQGADRLRVVVNALTR CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHH LRFCTPQGVMEFATKEGAEAALHGYLPWFDVPGRQTADTPVMFGHWSALKAQDAQKSGSL HHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCE LLPLDTGCVWGGSLTAARLGATPAAYELISVACAQAQNPKAKPG EEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLYCIGDLQGCNEPFQRLLEKIDFSPSRDTLYLLGDLVNRGPHSLAVLRHLSHLGDAAQ CEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLLGNHDLHLLALWQGMGKLHRSDTAQDILQASDRGALLEWLRHRNMAIHAHGWLMVHAG HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCEEEEECC VLPQWSTAKTMALAAEVEQALRGPDLKGFLRDMYGNTPCEWHDSLQGADRLRVVVNALTR CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHH LRFCTPQGVMEFATKEGAEAALHGYLPWFDVPGRQTADTPVMFGHWSALKAQDAQKSGSL HHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCE LLPLDTGCVWGGSLTAARLGATPAAYELISVACAQAQNPKAKPG EEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA