| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787391
Identifier: 91787391
GI number: 91787391
Start: 1552787
End: 1553752
Strand: Reverse
Name: 91787391
Synonym: Bpro_1497
Alternate gene names: NA
Gene position: 1553752-1552787 (Counterclockwise)
Preceding gene: 91787392
Following gene: 91787383
Centisome position: 29.88
GC content: 63.98
Gene sequence:
>966_bases ATGCCACGCTACATCAACGTCGCCCTGGGCCAGTTGGGCCCCATCCAGCGCAATGACACCCGCGCCCAAGTGGTCGGGCG CCTGTGCGCACTCATGCGCCAGGCCCACGCGGTGGGGGCGCAGCTCATCGTGTATCCCGAACTGGCGCTGACCACCTTTT TCCCGCGCTGGTACATCGAAGATCCACAGGAGATCAACCAGTACTTCGAGCGTGAGATGCCCAGCGCCGCCACCCAACCC CTGTTCAGCCTGGCGCAGGAGCTGGGTGTGGGCTTTTACCTGGGTTACGCCGAGCTGGCACAGGAGGCCGGCGCGGAGCT GCGCTACAACACCTCCATTCTGGTCGACCGCTTTGGGCAGATCGTGGCCAAGTACCGCAAGGTGCATCTGCCAGGTCACA AAGAGCATGAACCCTGGCGGCGCTTTCAGCACCTGGAAAAGCGCTACTTCACACCCGGACCCGGCTTTGGTGTGACAAAC GCTTTCGGCGGCGTGATGGGCATGGCCATTTGCAACGACCGGCGCTGGGCCGAAACCTACCGCGTGATGGGCCTGCAAGG GGTGGAGATGGTGCTGATTGGCTACAACACCCCGGTGCACAACGCCCCCGCTCCCGAGCATGACGACCTTTCACTGTTTC ACAACCAGCTGTCCATGCAGGCCGGTGCCTACCAGAACGGCACCTGGGTGGTGGGGGTGGCCAAAGCCGGGGTGGAAGAA GGCGTGGACAGCATAGGCGGCAGCTGCATCATCGCCCCCTCTGGCGAGGTGGTGGCCCGCTGCCTCACCAAGGGCGACGA AATGGCCATCGCCCGTTGCGACCTGGACTTCTGCGCCGTGTACAAGCGCACCACCTTCAACTTCGATATGCACCGCCAGC CCCATGCCTATGGCCTGATCGTCGAGCGCAAGGGGGAGACCCTGGCGGCAGATGGCAGCCCGCTGCCTGTGCCACCAGCC GATTGA
Upstream 100 bases:
>100_bases CGTGCGCGAACACACCGAACCCGACGACCTGCTGCGCGGAGCCCAGTTGCTGCTCCAGGTGGTGGCCGAACTTGCCAACC GAACTTCATAGTCTTTAAAC
Downstream 100 bases:
>100_bases ACTTGCCATCGTTTGTATAGCTTCTTGCGCAATTTTTGCACGGACTGCAAGGGGTCTATGCTTACAACATCGGCAATCAG GCTGTTCCTGCCTGCGAAAT
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MPRYINVALGQLGPIQRNDTRAQVVGRLCALMRQAHAVGAQLIVYPELALTTFFPRWYIEDPQEINQYFEREMPSAATQP LFSLAQELGVGFYLGYAELAQEAGAELRYNTSILVDRFGQIVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTPGPGFGVTN AFGGVMGMAICNDRRWAETYRVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEE GVDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAVYKRTTFNFDMHRQPHAYGLIVERKGETLAADGSPLPVPPA D
Sequences:
>Translated_321_residues MPRYINVALGQLGPIQRNDTRAQVVGRLCALMRQAHAVGAQLIVYPELALTTFFPRWYIEDPQEINQYFEREMPSAATQP LFSLAQELGVGFYLGYAELAQEAGAELRYNTSILVDRFGQIVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTPGPGFGVTN AFGGVMGMAICNDRRWAETYRVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEE GVDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAVYKRTTFNFDMHRQPHAYGLIVERKGETLAADGSPLPVPPA D >Mature_320_residues PRYINVALGQLGPIQRNDTRAQVVGRLCALMRQAHAVGAQLIVYPELALTTFFPRWYIEDPQEINQYFEREMPSAATQPL FSLAQELGVGFYLGYAELAQEAGAELRYNTSILVDRFGQIVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTPGPGFGVTNA FGGVMGMAICNDRRWAETYRVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEEG VDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAVYKRTTFNFDMHRQPHAYGLIVERKGETLAADGSPLPVPPAD
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=269, Percent_Identity=24.907063197026, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031947, Length=282, Percent_Identity=29.0780141843972, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI297632348, Length=282, Percent_Identity=29.0780141843972, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI297632350, Length=282, Percent_Identity=29.0780141843972, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 35617; Mature: 35486
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYINVALGQLGPIQRNDTRAQVVGRLCALMRQAHAVGAQLIVYPELALTTFFPRWYIE CCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCC DPQEINQYFEREMPSAATQPLFSLAQELGVGFYLGYAELAQEAGAELRYNTSILVDRFGQ CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCEEECHHHHHHHHHH IVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTPGPGFGVTNAFGGVMGMAICNDRRWAETY HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH RVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEE HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHH GVDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAVYKRTTFNFDMHRQPHAYGLI HHHHCCCCEEEECCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCEECCCCCCCCCEEEEE VERKGETLAADGSPLPVPPAD EEECCCEEECCCCCCCCCCCC >Mature Secondary Structure PRYINVALGQLGPIQRNDTRAQVVGRLCALMRQAHAVGAQLIVYPELALTTFFPRWYIE CCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCC DPQEINQYFEREMPSAATQPLFSLAQELGVGFYLGYAELAQEAGAELRYNTSILVDRFGQ CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCEEECHHHHHHHHHH IVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTPGPGFGVTNAFGGVMGMAICNDRRWAETY HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH RVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEE HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHH GVDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAVYKRTTFNFDMHRQPHAYGLI HHHHCCCCEEEECCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCEECCCCCCCCCEEEEE VERKGETLAADGSPLPVPPAD EEECCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]