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The map label for this gene is gbpR [H]

Identifier: 91787383

GI number: 91787383

Start: 1544626

End: 1545624

Strand: Reverse

Name: gbpR [H]

Synonym: Bpro_1489

Alternate gene names: 91787383

Gene position: 1545624-1544626 (Counterclockwise)

Preceding gene: 91787391

Following gene: 91787375

Centisome position: 29.72

GC content: 66.67

Gene sequence:

>999_bases
ATGGAATATCGACAAATCCCTGCCAATGCGGTCCCGAGGCTGATCAACCGCCTGCGCCTGAAGCACTGGGCCTTGCTGGC
CGCACTGGCCGAAACGCGCACGCTGCATGAAGCCGCCACACGCATCAGCGTCACGCAGCCCTCCGCGACCAAGATGCTGG
CCGACATCGAGCAGGCCTTCCAGTTCCCGCTGTTCGAGCGGCACTCCCGCGGGCTGCGGCCGACGTCGCTGGGCGAAGAG
GTGGTGGGCTATGCGCGGCAATCGCAGGCCAGCCTGGCGCGCTTCATCGAAGGGCTGGAGGTCAAGCGGCGCGGCGGGCA
TGGGCAGTTGGTGATTGGCGCCATCATGGGGGCGGCACCCGACCTGGTGGCGCGTGCCGTGGCGCAGATCAAGCAGCAAA
GGCCCCTGCTCAACATCCGCATGGTGGGCGAGACCAGTGACCAGATCAGCACGTCGCTGGAACGCCATGACATCGAGCTC
GCCGTGGGCCGGTTTTCCTCGCTGCTGCAGCACAACCTGTTTGACTTCACACCCCTGTCCAATGAAGTGATGCAAGTGGT
CGTGCGGCGCGGACATGCGCTGGTGCGCCAGAAGAAACTGCCGCTGGCCGCGCTGATGGACTGGCCGTGGATCCTGCAGC
CGGTGACCAGCCCGGCCCGGCATCTGCTCGAAGAAGAATTCGCCAGGGCCCGGCTGTCGACCCCGGCCAACATCATCGAA
TGTGCGTCAGTTTTCGCAACGCTTCAGCTCCTGCAAACCAGCGATGCCGTGGCGGCGCTGCCCGAATCAGTCGTGCGCGA
CCATGTCAAGGCCGGCCTGTTGCGGGCGCTGCCCATCCCCATCGGCAGCGACCTCAAAGGCTTCGGCATCCTGACGCGCA
AGGGCGAGCCCCTGTCGGAGATTGCCGCCACTTTTGTGAGCCTGCTGCACCAGTTCGCCGAACCAGCGGCAGTGCCGGCG
CCGCGGCGGGGGCGGCGGCAGGCGCCCGCGTCGCCCTGA

Upstream 100 bases:

>100_bases
ACCAGCTTCATTTCGTCTCCTGTGTCGTCATTGATGAGCGCCACTGTAAGATCTCCAGTTATAGATATCCAATCGAAAAT
TTCGCAAAAGCATTTCCAAA

Downstream 100 bases:

>100_bases
CGCTCGCCCGACCCGGGGCCGGGTTCACGCCGGCCGGGGGTAGGCCCGGGTCATCCAGCCGTAGATGGCCGCGCCGGCCA
GCAGCGTGGCGGCCGCAATT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Galactose-binding protein regulator; GBP regulator [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MEYRQIPANAVPRLINRLRLKHWALLAALAETRTLHEAATRISVTQPSATKMLADIEQAFQFPLFERHSRGLRPTSLGEE
VVGYARQSQASLARFIEGLEVKRRGGHGQLVIGAIMGAAPDLVARAVAQIKQQRPLLNIRMVGETSDQISTSLERHDIEL
AVGRFSSLLQHNLFDFTPLSNEVMQVVVRRGHALVRQKKLPLAALMDWPWILQPVTSPARHLLEEEFARARLSTPANIIE
CASVFATLQLLQTSDAVAALPESVVRDHVKAGLLRALPIPIGSDLKGFGILTRKGEPLSEIAATFVSLLHQFAEPAAVPA
PRRGRRQAPASP

Sequences:

>Translated_332_residues
MEYRQIPANAVPRLINRLRLKHWALLAALAETRTLHEAATRISVTQPSATKMLADIEQAFQFPLFERHSRGLRPTSLGEE
VVGYARQSQASLARFIEGLEVKRRGGHGQLVIGAIMGAAPDLVARAVAQIKQQRPLLNIRMVGETSDQISTSLERHDIEL
AVGRFSSLLQHNLFDFTPLSNEVMQVVVRRGHALVRQKKLPLAALMDWPWILQPVTSPARHLLEEEFARARLSTPANIIE
CASVFATLQLLQTSDAVAALPESVVRDHVKAGLLRALPIPIGSDLKGFGILTRKGEPLSEIAATFVSLLHQFAEPAAVPA
PRRGRRQAPASP
>Mature_332_residues
MEYRQIPANAVPRLINRLRLKHWALLAALAETRTLHEAATRISVTQPSATKMLADIEQAFQFPLFERHSRGLRPTSLGEE
VVGYARQSQASLARFIEGLEVKRRGGHGQLVIGAIMGAAPDLVARAVAQIKQQRPLLNIRMVGETSDQISTSLERHDIEL
AVGRFSSLLQHNLFDFTPLSNEVMQVVVRRGHALVRQKKLPLAALMDWPWILQPVTSPARHLLEEEFARARLSTPANIIE
CASVFATLQLLQTSDAVAALPESVVRDHVKAGLLRALPIPIGSDLKGFGILTRKGEPLSEIAATFVSLLHQFAEPAAVPA
PRRGRRQAPASP

Specific function: Does not seem to be required for sbpA expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=291, Percent_Identity=26.8041237113402, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI145693105, Length=281, Percent_Identity=22.0640569395018, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787601, Length=253, Percent_Identity=21.3438735177866, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI157672245, Length=255, Percent_Identity=23.1372549019608, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36541; Mature: 36541

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRQIPANAVPRLINRLRLKHWALLAALAETRTLHEAATRISVTQPSATKMLADIEQAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QFPLFERHSRGLRPTSLGEEVVGYARQSQASLARFIEGLEVKRRGGHGQLVIGAIMGAAP
HCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
DLVARAVAQIKQQRPLLNIRMVGETSDQISTSLERHDIELAVGRFSSLLQHNLFDFTPLS
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NEVMQVVVRRGHALVRQKKLPLAALMDWPWILQPVTSPARHLLEEEFARARLSTPANIIE
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH
CASVFATLQLLQTSDAVAALPESVVRDHVKAGLLRALPIPIGSDLKGFGILTRKGEPLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH
IAATFVSLLHQFAEPAAVPAPRRGRRQAPASP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEYRQIPANAVPRLINRLRLKHWALLAALAETRTLHEAATRISVTQPSATKMLADIEQAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QFPLFERHSRGLRPTSLGEEVVGYARQSQASLARFIEGLEVKRRGGHGQLVIGAIMGAAP
HCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
DLVARAVAQIKQQRPLLNIRMVGETSDQISTSLERHDIELAVGRFSSLLQHNLFDFTPLS
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NEVMQVVVRRGHALVRQKKLPLAALMDWPWILQPVTSPARHLLEEEFARARLSTPANIIE
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH
CASVFATLQLLQTSDAVAALPESVVRDHVKAGLLRALPIPIGSDLKGFGILTRKGEPLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH
IAATFVSLLHQFAEPAAVPAPRRGRRQAPASP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10361275 [H]