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The map label for this gene is yliC [C]

Identifier: 91787340

GI number: 91787340

Start: 1496473

End: 1497417

Strand: Reverse

Name: yliC [C]

Synonym: Bpro_1446

Alternate gene names: 91787340

Gene position: 1497417-1496473 (Counterclockwise)

Preceding gene: 91787341

Following gene: 91787339

Centisome position: 28.8

GC content: 65.19

Gene sequence:

>945_bases
ATGCTGCGTTTTGCGCTGTCCCGTCTCGCCATGGCCATACCGACGCTGCTGATCGTCGCGGTGGCCGTGTTCGTACTGAT
CCGATTGATTCCCGGCGACCCGGCGCAGCTGCTGCTTGGCGACCTCGCCGACCCGGTCCGGCTGGCCGACCTGCGCGCCC
AGCTCGGCCTCGACAAGAGCTGGCCGGTGCAATTCACCATCTGGGGCCGCCACGTGCTGGGCGGCGACCTCGGCGTTTCC
ATCAACACCGGCGAACCCGTGCTGCACCTGGTGCTGAGCCGCTTTCTCGTCAGCGCGCAGATTGTGATCATTGCCGTGTT
CTTCGCCACCCTCGTCGCCGTGCCCGCCGGCATGATCGCCGCCTGGAAGCAAAATCGCCTGCCCGACCTGATGCTGGTCG
GCACGGCGACCCTGCTGGTGTCCATTCCCACCTTCTGGCTGGGCCTCTTGCTGCTGCTCTTCTTCGGCCTCAAGCTCGAA
TGGCTGCCCGTGGTCGGCTATGTCTCCATCATGAACGACTGGAAGTCGGGCTTGCTGTACCTCCTGATGCCCATCCTCAC
GCTGTTCCTGCATGAGATCGGCGTGCTGATCCGCATGGCCAGGGCCAGCACGCTGGAGGTGCTGCGGCTGGACTACATCA
CCCACGCGCGCGCCAAGGGCCTGTCCGAGCGCGCCGTGCTGCTGCACCACGCCTTTCGCAACTCTTTCGGCCCGACCTGG
ACGTTGATAGGCCTGGTGCTGGGCAACCTGCTGGGCGGCGTGGCCGTTGTCGAGACTGTCTTCACCATCCCCGGCCTGGG
CCGCCTGCTGGTCGATGCGATCTTCGCGCGCGACTATCCGGTGATCCAGGGCTGCCTGCTGCTGGTCGCCGTGATCTACG
TCATCACCAACCTGGTCATCGACCTTTGCTACCCGATCTTCGACCCGAGGGTGCTCGCGGAATGA

Upstream 100 bases:

>100_bases
CGCCACGCTGCGGCGCCTGCGGACGGCCAGCCGCTAGGCGGCCCCAGTCACTTCACCATTTCACCACTTCAGCCACTCCA
CTGACAACGGAAGAGCCATC

Downstream 100 bases:

>100_bases
AAAAGTTTTTAAGCCCGCAGGCCCTGATAGGCCTCGCCATCGTGGGGACCATCCTCGCTGCGGCCATCCTGGCCTTCTTC
TGGACGCCGCACGAGCCGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLADPVRLADLRAQLGLDKSWPVQFTIWGRHVLGGDLGVS
INTGEPVLHLVLSRFLVSAQIVIIAVFFATLVAVPAGMIAAWKQNRLPDLMLVGTATLLVSIPTFWLGLLLLLFFGLKLE
WLPVVGYVSIMNDWKSGLLYLLMPILTLFLHEIGVLIRMARASTLEVLRLDYITHARAKGLSERAVLLHHAFRNSFGPTW
TLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLLVAVIYVITNLVIDLCYPIFDPRVLAE

Sequences:

>Translated_314_residues
MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLADPVRLADLRAQLGLDKSWPVQFTIWGRHVLGGDLGVS
INTGEPVLHLVLSRFLVSAQIVIIAVFFATLVAVPAGMIAAWKQNRLPDLMLVGTATLLVSIPTFWLGLLLLLFFGLKLE
WLPVVGYVSIMNDWKSGLLYLLMPILTLFLHEIGVLIRMARASTLEVLRLDYITHARAKGLSERAVLLHHAFRNSFGPTW
TLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLLVAVIYVITNLVIDLCYPIFDPRVLAE
>Mature_314_residues
MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLADPVRLADLRAQLGLDKSWPVQFTIWGRHVLGGDLGVS
INTGEPVLHLVLSRFLVSAQIVIIAVFFATLVAVPAGMIAAWKQNRLPDLMLVGTATLLVSIPTFWLGLLLLLFFGLKLE
WLPVVGYVSIMNDWKSGLLYLLMPILTLFLHEIGVLIRMARASTLEVLRLDYITHARAKGLSERAVLLHHAFRNSFGPTW
TLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLLVAVIYVITNLVIDLCYPIFDPRVLAE

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=311, Percent_Identity=41.4790996784566, Blast_Score=220, Evalue=8e-59,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=38.2789317507418, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=36.9426751592357, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=34.0764331210191, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787761, Length=317, Percent_Identity=36.9085173501577, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=30.2238805970149, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1788504, Length=366, Percent_Identity=25.9562841530055, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34421; Mature: 34421

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLADPVRLADLRAQLGLDKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
WPVQFTIWGRHVLGGDLGVSINTGEPVLHLVLSRFLVSAQIVIIAVFFATLVAVPAGMIA
CCEEEEEECCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKQNRLPDLMLVGTATLLVSIPTFWLGLLLLLFFGLKLEWLPVVGYVSIMNDWKSGLLY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LLMPILTLFLHEIGVLIRMARASTLEVLRLDYITHARAKGLSERAVLLHHAFRNSFGPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
TLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLLVAVIYVITNLVI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLCYPIFDPRVLAE
HHHHHHCCCHHCCC
>Mature Secondary Structure
MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLADPVRLADLRAQLGLDKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
WPVQFTIWGRHVLGGDLGVSINTGEPVLHLVLSRFLVSAQIVIIAVFFATLVAVPAGMIA
CCEEEEEECCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKQNRLPDLMLVGTATLLVSIPTFWLGLLLLLFFGLKLEWLPVVGYVSIMNDWKSGLLY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LLMPILTLFLHEIGVLIRMARASTLEVLRLDYITHARAKGLSERAVLLHHAFRNSFGPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
TLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLLVAVIYVITNLVI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLCYPIFDPRVLAE
HHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]