Click here to switch to the map view.

The map label for this gene is yliD [C]

Identifier: 91787339

GI number: 91787339

Start: 1495655

End: 1496476

Strand: Reverse

Name: yliD [C]

Synonym: Bpro_1445

Alternate gene names: 91787339

Gene position: 1496476-1495655 (Counterclockwise)

Preceding gene: 91787340

Following gene: 91787338

Centisome position: 28.78

GC content: 65.45

Gene sequence:

>822_bases
ATGAAAAAGTTTTTAAGCCCGCAGGCCCTGATAGGCCTCGCCATCGTGGGGACCATCCTCGCTGCGGCCATCCTGGCCTT
CTTCTGGACGCCGCACGAGCCGCTCAAGATCAACTTCATGGCGCGCCTGAAGCCGCCCAGCGCCACCTACCTGTTCGGCA
CCGACGAGTTCGGCCGCGACGAGCTCTCGCGCCTGATGGCTGGCGCCTCCAACAGCGTGTGGATCAGCTTCCTGACCGTG
CTGTTCTCCATCACCATCGGCACCGCCATCGGCGTGCTGACCGGCTTTGTGCGCGGCTGGACCGACCGCATCGTCATGGC
CTTCATCAACGCCCTGCTGGCCTTTCCGGGCCTGCTGCTGGCGCTGGCGCTGCTGGCGGTCTTCGGCGCCAACAAGTACG
GCATCATCCTGGCGCTGGGCCTGGCCTACACGCCGTCGGTCACGCGCATCGTGCGCGGCACGGTGATGTCGCTGCGCGAA
AAGGAATTCATCGAATCTTCGCGCGTGCTCGGCAATTCCGAGCTTTACACCATGTTCCGCCACGTGCTGCCCAACTGCGT
GGCGCCGCTGACGGTGCTCGCAACCTCGATGTTCGGTTGGGTCATCCTCGCGGAAAGCTCGCTGTCCTTCCTGGGCCTGG
GCGTACCCCCGCCGGCGCCGACCTGGGGCAACATGCTGGCCGCGGCCCGGCCCTTCATGGCGCAGGCCACTTACCTTTCC
ATCTTCCCGGGCCTGTGCATCGCGCTGACCTTGCTGGGCATCAACTTCCTGGGCGACGCGGTGCGCGACCTGCTGGACCC
GCGCATGAGGGGTATCGAATGA

Upstream 100 bases:

>100_bases
TGATCCAGGGCTGCCTGCTGCTGGTCGCCGTGATCTACGTCATCACCAACCTGGTCATCGACCTTTGCTACCCGATCTTC
GACCCGAGGGTGCTCGCGGA

Downstream 100 bases:

>100_bases
CGCATCTGGTGGATGTCTCCGGCCTGAGCCTATCAATCGGCAAGGGCGGCCGCGAAATCGTGCGCAATGTCTCGTTCACG
GTCGCGCCCGGCGAAATCGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKFLSPQALIGLAIVGTILAAAILAFFWTPHEPLKINFMARLKPPSATYLFGTDEFGRDELSRLMAGASNSVWISFLTV
LFSITIGTAIGVLTGFVRGWTDRIVMAFINALLAFPGLLLALALLAVFGANKYGIILALGLAYTPSVTRIVRGTVMSLRE
KEFIESSRVLGNSELYTMFRHVLPNCVAPLTVLATSMFGWVILAESSLSFLGLGVPPPAPTWGNMLAAARPFMAQATYLS
IFPGLCIALTLLGINFLGDAVRDLLDPRMRGIE

Sequences:

>Translated_273_residues
MKKFLSPQALIGLAIVGTILAAAILAFFWTPHEPLKINFMARLKPPSATYLFGTDEFGRDELSRLMAGASNSVWISFLTV
LFSITIGTAIGVLTGFVRGWTDRIVMAFINALLAFPGLLLALALLAVFGANKYGIILALGLAYTPSVTRIVRGTVMSLRE
KEFIESSRVLGNSELYTMFRHVLPNCVAPLTVLATSMFGWVILAESSLSFLGLGVPPPAPTWGNMLAAARPFMAQATYLS
IFPGLCIALTLLGINFLGDAVRDLLDPRMRGIE
>Mature_273_residues
MKKFLSPQALIGLAIVGTILAAAILAFFWTPHEPLKINFMARLKPPSATYLFGTDEFGRDELSRLMAGASNSVWISFLTV
LFSITIGTAIGVLTGFVRGWTDRIVMAFINALLAFPGLLLALALLAVFGANKYGIILALGLAYTPSVTRIVRGTVMSLRE
KEFIESSRVLGNSELYTMFRHVLPNCVAPLTVLATSMFGWVILAESSLSFLGLGVPPPAPTWGNMLAAARPFMAQATYLS
IFPGLCIALTLLGINFLGDAVRDLLDPRMRGIE

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=226, Percent_Identity=42.9203539823009, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1787760, Length=268, Percent_Identity=34.3283582089552, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=39.7637795275591, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=33.8842975206612, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787498, Length=274, Percent_Identity=33.2116788321168, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787549, Length=268, Percent_Identity=31.7164179104478, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=32.7433628318584, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29516; Mature: 29516

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLSPQALIGLAIVGTILAAAILAFFWTPHEPLKINFMARLKPPSATYLFGTDEFGRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCHH
ELSRLMAGASNSVWISFLTVLFSITIGTAIGVLTGFVRGWTDRIVMAFINALLAFPGLLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALLAVFGANKYGIILALGLAYTPSVTRIVRGTVMSLREKEFIESSRVLGNSELYTMFR
HHHHHHHHCCCCCHHHEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HVLPNCVAPLTVLATSMFGWVILAESSLSFLGLGVPPPAPTWGNMLAAARPFMAQATYLS
HHHHHHHHHHHHHHHHHHHHHHEECCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
IFPGLCIALTLLGINFLGDAVRDLLDPRMRGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKFLSPQALIGLAIVGTILAAAILAFFWTPHEPLKINFMARLKPPSATYLFGTDEFGRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCHH
ELSRLMAGASNSVWISFLTVLFSITIGTAIGVLTGFVRGWTDRIVMAFINALLAFPGLLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALLAVFGANKYGIILALGLAYTPSVTRIVRGTVMSLREKEFIESSRVLGNSELYTMFR
HHHHHHHHCCCCCHHHEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HVLPNCVAPLTVLATSMFGWVILAESSLSFLGLGVPPPAPTWGNMLAAARPFMAQATYLS
HHHHHHHHHHHHHHHHHHHHHHEECCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
IFPGLCIALTLLGINFLGDAVRDLLDPRMRGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA