| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787323
Identifier: 91787323
GI number: 91787323
Start: 1475147
End: 1475674
Strand: Reverse
Name: 91787323
Synonym: Bpro_1428
Alternate gene names: NA
Gene position: 1475674-1475147 (Counterclockwise)
Preceding gene: 91787331
Following gene: 91787320
Centisome position: 28.38
GC content: 65.72
Gene sequence:
>528_bases ATGAGACACGACACGCCCGACCCCACACTGCGCCGCCACTGGCTGCTGGCACTCCTCGCCGCTTCAGTGGCTGCGCTGCT CAATGCCTGCAAAACCGCCCCTGAAGTGACTCCTCCTCCCGCTCCACCGAAGGAGCCCGACACGCCGGTGACCGGTCCTG TTGCCGCCCGGAAAGGCTCGGCCCGAAGCTCTTCGGCAAGCTCGCCGCGCGCCTACCGGGAAGACGGCGCCACGCATATC TACGGCCTCAATGCCGACCGTATTTACAAGGGCAGAATGCCGCCGCTGCTCTACGCCATCGGTGTGCTGAACGTGGAGAT AGACCGCGCCGGCCGCGTGACCCGCCTGGACTGGATGCGTGCGCCGCGCCATGCGCCGGAGGTGGTCGCGGAAATCGAGC GCACCATCAAGGAGGCCTCACCCTTCCCCGCGCCCACCCGGCTGGGCAAGGTGGTTTATACCGACACCTGGCTGTGGCAT AAAAGCGGCAAGTTTCAGCTGGATACGCTGACCGAAGGGCAGAACTAG
Upstream 100 bases:
>100_bases GACCGGGTACTGCGGTAATAGCCAAAGACGCCGCCCGCTCCCAGGACCTGTCCGGACAAGAGCCCTGAAAATAACGATAG CAATAGCTGACCTGCACATC
Downstream 100 bases:
>100_bases AGCCCCCACGCTAGAGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCT GGCAAAGCCAGTCCCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRHDTPDPTLRRHWLLALLAASVAALLNACKTAPEVTPPPAPPKEPDTPVTGPVAARKGSARSSSASSPRAYREDGATHI YGLNADRIYKGRMPPLLYAIGVLNVEIDRAGRVTRLDWMRAPRHAPEVVAEIERTIKEASPFPAPTRLGKVVYTDTWLWH KSGKFQLDTLTEGQN
Sequences:
>Translated_175_residues MRHDTPDPTLRRHWLLALLAASVAALLNACKTAPEVTPPPAPPKEPDTPVTGPVAARKGSARSSSASSPRAYREDGATHI YGLNADRIYKGRMPPLLYAIGVLNVEIDRAGRVTRLDWMRAPRHAPEVVAEIERTIKEASPFPAPTRLGKVVYTDTWLWH KSGKFQLDTLTEGQN >Mature_175_residues MRHDTPDPTLRRHWLLALLAASVAALLNACKTAPEVTPPPAPPKEPDTPVTGPVAARKGSARSSSASSPRAYREDGATHI YGLNADRIYKGRMPPLLYAIGVLNVEIDRAGRVTRLDWMRAPRHAPEVVAEIERTIKEASPFPAPTRLGKVVYTDTWLWH KSGKFQLDTLTEGQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19249; Mature: 19249
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHDTPDPTLRRHWLLALLAASVAALLNACKTAPEVTPPPAPPKEPDTPVTGPVAARKGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARSSSASSPRAYREDGATHIYGLNADRIYKGRMPPLLYAIGVLNVEIDRAGRVTRLDWMR CCCCCCCCCCHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHEEEECCCCCEEHHHHHH APRHAPEVVAEIERTIKEASPFPAPTRLGKVVYTDTWLWHKSGKFQLDTLTEGQN CCCCCHHHHHHHHHHHHHCCCCCCHHHHCEEEEECEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MRHDTPDPTLRRHWLLALLAASVAALLNACKTAPEVTPPPAPPKEPDTPVTGPVAARKGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARSSSASSPRAYREDGATHIYGLNADRIYKGRMPPLLYAIGVLNVEIDRAGRVTRLDWMR CCCCCCCCCCHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHEEEECCCCCEEHHHHHH APRHAPEVVAEIERTIKEASPFPAPTRLGKVVYTDTWLWHKSGKFQLDTLTEGQN CCCCCHHHHHHHHHHHHHCCCCCCHHHHCEEEEECEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA