Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787319

Identifier: 91787319

GI number: 91787319

Start: 1471703

End: 1472641

Strand: Reverse

Name: 91787319

Synonym: Bpro_1424

Alternate gene names: NA

Gene position: 1472641-1471703 (Counterclockwise)

Preceding gene: 91787320

Following gene: 91787318

Centisome position: 28.32

GC content: 63.47

Gene sequence:

>939_bases
ATGAACACCTACGATTCCACTGCACCCTATCCCCGTGATTTGGTCGGTTACGGCCGCAACCCGCCGCATGCCCGGTGGCC
AGGCCAGGCGCGCATTGCCGTGCAGTTTGTCCTGAACTACGAGGAAGGCGGCGAAAACGCCGTGCTGCATGGCGATCCAG
GCTCCGAGCAGTTCCTCTCCGAAATGTTCAACCCGGCCAGCTTTGCCGACCGCCACCTGAGCATGGAAGGTATTTACGAA
TATGGCTCGCGTGTGGGCGTGTGGCGCATCCTGCGCGAATTTGAAAAGCGCAAGCTGCCGCTGACCGTGTTTGGCGTCGG
CATGGCGCTGCAGCGCCACCCTGAACTGACCGCGGCCTTCGTTGAGCTGGGCCATGAAATCGCCTGCCACGGCTGGCGCT
GGATCAGCTACCAGAATGTGGACGAAGCCACCGAGCGCGAGCACATGCGCCTGGGGCTGGAGGCCATCGAACAACTCACC
GGCACCCGCCCTTTGGGCTGGTACACCGGCCGCGACAGCCCGCGCACGCGCCGCCTGGTCGCCGATGACGGCCAGCTGGC
CTACGACAGCGACTACTACGGCGACGACCTGCCCTTCTGGATGAAGGTAGCGCGCACCGACGGCACGGTAGTGCCACGCC
TGGTGGTGCCCTACACGCTGGACACTAACGACATGCGATTTTCCCTGCCCCAGGGGTTTTCGCAGGGCAACGATTTCTTC
ACCTACCTGAAGGACAGCTTTGACGCGCTCTACGCCGAAGGCGACGAGGCACCGAAGATGCTCAGCATCGGCATGCATTG
CCGGCTGCTTGGGCGCCCCGGGCGCATCGTTGCGCTGCAGCGCTTTCTGGACCATGTGCAGCAGCACGACCGCGTCTGGG
TATGCCGCCGCATTGATATTGCCCGGCACTGGCAGCAGACCCATCCGTATCCAGCATGA

Upstream 100 bases:

>100_bases
CGCTTGCCGTGCGCCTGATGACCGAGCATTTGCTGCACGTCGAGCAAAACCTGGCCTTTGACCGCAAGGTACCCACCAAC
GATATTTCGATGGCACTGTC

Downstream 100 bases:

>100_bases
AAGGGAACCCAGCCATGGCCATCACCCTGGAACAAGTCAATCGCGCCTCCCGCGCCGAAGCGATGGTGCTGCTGGACGGC
CTGTACGAACACTCGCCGTG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNTYDSTAPYPRDLVGYGRNPPHARWPGQARIAVQFVLNYEEGGENAVLHGDPGSEQFLSEMFNPASFADRHLSMEGIYE
YGSRVGVWRILREFEKRKLPLTVFGVGMALQRHPELTAAFVELGHEIACHGWRWISYQNVDEATEREHMRLGLEAIEQLT
GTRPLGWYTGRDSPRTRRLVADDGQLAYDSDYYGDDLPFWMKVARTDGTVVPRLVVPYTLDTNDMRFSLPQGFSQGNDFF
TYLKDSFDALYAEGDEAPKMLSIGMHCRLLGRPGRIVALQRFLDHVQQHDRVWVCRRIDIARHWQQTHPYPA

Sequences:

>Translated_312_residues
MNTYDSTAPYPRDLVGYGRNPPHARWPGQARIAVQFVLNYEEGGENAVLHGDPGSEQFLSEMFNPASFADRHLSMEGIYE
YGSRVGVWRILREFEKRKLPLTVFGVGMALQRHPELTAAFVELGHEIACHGWRWISYQNVDEATEREHMRLGLEAIEQLT
GTRPLGWYTGRDSPRTRRLVADDGQLAYDSDYYGDDLPFWMKVARTDGTVVPRLVVPYTLDTNDMRFSLPQGFSQGNDFF
TYLKDSFDALYAEGDEAPKMLSIGMHCRLLGRPGRIVALQRFLDHVQQHDRVWVCRRIDIARHWQQTHPYPA
>Mature_312_residues
MNTYDSTAPYPRDLVGYGRNPPHARWPGQARIAVQFVLNYEEGGENAVLHGDPGSEQFLSEMFNPASFADRHLSMEGIYE
YGSRVGVWRILREFEKRKLPLTVFGVGMALQRHPELTAAFVELGHEIACHGWRWISYQNVDEATEREHMRLGLEAIEQLT
GTRPLGWYTGRDSPRTRRLVADDGQLAYDSDYYGDDLPFWMKVARTDGTVVPRLVVPYTLDTNDMRFSLPQGFSQGNDFF
TYLKDSFDALYAEGDEAPKMLSIGMHCRLLGRPGRIVALQRFLDHVQQHDRVWVCRRIDIARHWQQTHPYPA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35895; Mature: 35895

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYDSTAPYPRDLVGYGRNPPHARWPGQARIAVQFVLNYEEGGENAVLHGDPGSEQFLS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHH
EMFNPASFADRHLSMEGIYEYGSRVGVWRILREFEKRKLPLTVFGVGMALQRHPELTAAF
HHCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHH
VELGHEIACHGWRWISYQNVDEATEREHMRLGLEAIEQLTGTRPLGWYTGRDSPRTRRLV
HHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEE
ADDGQLAYDSDYYGDDLPFWMKVARTDGTVVPRLVVPYTLDTNDMRFSLPQGFSQGNDFF
ECCCCEEECCCCCCCCCHHHHEEECCCCCEECEEEEEEEECCCCEEEECCCCCCCCCHHH
TYLKDSFDALYAEGDEAPKMLSIGMHCRLLGRPGRIVALQRFLDHVQQHDRVWVCRRIDI
HHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
ARHWQQTHPYPA
HHHHHHCCCCCC
>Mature Secondary Structure
MNTYDSTAPYPRDLVGYGRNPPHARWPGQARIAVQFVLNYEEGGENAVLHGDPGSEQFLS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHH
EMFNPASFADRHLSMEGIYEYGSRVGVWRILREFEKRKLPLTVFGVGMALQRHPELTAAF
HHCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHH
VELGHEIACHGWRWISYQNVDEATEREHMRLGLEAIEQLTGTRPLGWYTGRDSPRTRRLV
HHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEE
ADDGQLAYDSDYYGDDLPFWMKVARTDGTVVPRLVVPYTLDTNDMRFSLPQGFSQGNDFF
ECCCCEEECCCCCCCCCHHHHEEECCCCCEECEEEEEEEECCCCEEEECCCCCCCCCHHH
TYLKDSFDALYAEGDEAPKMLSIGMHCRLLGRPGRIVALQRFLDHVQQHDRVWVCRRIDI
HHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
ARHWQQTHPYPA
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA