| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is maeB [H]
Identifier: 91787316
GI number: 91787316
Start: 1465921
End: 1468224
Strand: Reverse
Name: maeB [H]
Synonym: Bpro_1421
Alternate gene names: 91787316
Gene position: 1468224-1465921 (Counterclockwise)
Preceding gene: 91787317
Following gene: 91787315
Centisome position: 28.23
GC content: 65.67
Gene sequence:
>2304_bases ATGGCTACTCCTCTTTCACCCGCTGAAGAAGCACTGCGCGACGCCGCCCGTGAATACCACCGCAGCCCGGTGCGCGGCAA GATATCCATCACGCCGACCAAACCGCTGTCGAACCAGCGGGACCTGTCCCTGGCGTATTCGCCCGGCGTGGCCTACCCCT GCCTTGACATCGAGGCCGACCCCTCGCTGGCGGCCGAATACACCTCGCGCGGCAACCTCGTGGGGGTCATCACCAATGGC ACGGCCGTCCTGGGACTGGGCGACATCGGCCCGCTGGCAGCCAAGCCGGTGATGGAAGGCAAGGGTTGCCTGTTCAAGAA ATTCGCCGGTATCGACGTGTTTGACATCGAACTGGCCGAGCACGACCCCGACAAGCTGATTGACATCATCGCCGCCATGG AGCCCACGCTGGGCGGCATCAACCTCGAGGACATCAAGGCGCCGGAGTGCTTTTACATCGAGCGCAAGCTGCGCGAGCGC ATGAACATCCCGGTGTTCCATGACGACCAGCACGGCACCGCCATCATCTCATCGGCGGCCGTGCTCAACGGCCTGGAGCT GGTGGGCAAGCGGATTGAAGACGTCAGGATCGCGGTCTCGGGGGCCGGAGCGGCCGCACTGGCCTGCCTGGACGTGATGG TGGGCCTGGGGGTGCGCCGTGAAAATGTCTATGTCTGCGACTCCAAAGGCGTGATCTACCACGGCCGCCCCGGTGGTTTT GACGAGTCCAAGAACCGCTTTGCCCAGGAAACGGCCCTGCGCACACTGGCCGACGCGGTCAACGGTGCGGACGTGTTTCT GGGGTGCTCGGCGCCCGGCGTGCTGACGCAGGACATGGTCAGGACCATGGCCCCCAGCCCGATCATTCTGGCGCTGGCCA ACCCCGAACCGGAAATCCGGCCCGAGCTGGCCAAGGCGGTGCGGCCGGACTGCATCATTGCCACGGGCCGTTCGGACTAC CCGAACCAGGTCAACAATGTCCTGTGTTTCCCCTACATCTTTCGCGGCGCGCTCGATTGCGGCGCCACCAAGATCACCGA GGAAATGAAGCTCGCCTGCGTGCGGCAGATTGCCGACCTGACCAAGGCGGACATCAGCGAGGAAGTCGCCCGGGCCTATA TCGGGCAGGAGCTGGTGTTTGGCCCCGACTACATCATTCCCAAGCCTTTTGACTCGCGCCTGATTCTCAGGATCGCACCG GCGGTGGCGCAGGCCGCCGAGGACTCCGGCGTGGCGACCCGGCCCATCACGGACATGGCCGCTTACCGGCAGGAACTGTC GCGTTTCGTGTACTCGACCGGCATGCTCATGCAACCGGTGTTCAATGCGGCTCGCGCCATCCCGGACGCGCACAAACGCG TGGCCTTCGCCGAAGGGGAGGACGACCGGGTGCTGCGCGCGGCGCAGCTGGTGCTTGACGAAGGCCTGGCCCGCCCCATC CTCATCGGCCGCCCTGCCGTGATCGAGACCCGCATCGCCAAGGCCGGACTGCGGCTGCGGCTCGGCGACGATGTGGAATG CGTCAATCCCGAGGACGACCCGCGCTTTCGCCATTACTGGGAAACCTACCACCGGATCATGGGCCGCCACGGCGTGACGC CCGAAGCCGCCAAGGCGGCGGTGCGCCGCTCCACCACCACCATCGCCGCGCTGATGGTCAAACTCGGCGACGCCGATGCC ATGCTGTGCGGCATGGTGGGCCGCTACGACGGACATCTTGAGCATGTACGCGACATCATCGGGCTCAAAGAGGATGCGTC CGGGTTTGCGGCGCTCAACGCACTGATGCTGGACAAACGCACCCTGTTCATCGCCGACACCTTTGTCAACGAAGACCCCA GCGCCGAGCAGCTGGCCAGCATTGCGCTGATGGCGGTCGACGAGGTGCGGCGCTTCGGCATCCCGCCCAAGGTGGCCTTT CTGTCGCACTCCAACTACGGCTCGTCCAACCGTGCGTCGGCGCGCAAGATGCGGCTGGCCCACGAGCTGTTCGCCAGGAT GGCGCCCGACGTGGAGTCCGATGGCGAGCTGCATGGCGATGCGGCGCTGTCGGAAGAGGTGCGGCGGGCGTCCCTGATGG AAAGCAATATGAGCGGGGAAGCCAACATCCTGATTTGCCCGAATCTGGATTCCGCCAACATCCTCTTCAACGTGCTCAAG ATGACGGGCGGCCAGGGCGTCACCGTCGGCCCCATTCTGCTCGGCACGGCCGCCTCGGCCCACATCCTGACCACCTCGGC CACCGTGCGGCGCGTGGTGAACATGACGGCACTGGCCGTGGCCAGCGCGGCAGCGCGGCGCTGA
Upstream 100 bases:
>100_bases CGTGCGCATGAACCGGAAAGCCGGCGCTCGACCGCATGAATACCAGAAAATAGTGCTGGTCGCCAGTCTTCCAGCCATCA GGAAAACAAGGAGACACTCA
Downstream 100 bases:
>100_bases CACGCGCCCCGGCACCAGTCCTGGAGCAGTGACATGCACCATCCGGAGCCTTCCCCCTCAAAACTCCCGCTGCGGCGGGA GTTTTGCTTTCCGGAGGCGC
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MATPLSPAEEALRDAAREYHRSPVRGKISITPTKPLSNQRDLSLAYSPGVAYPCLDIEADPSLAAEYTSRGNLVGVITNG TAVLGLGDIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAEHDPDKLIDIIAAMEPTLGGINLEDIKAPECFYIERKLRER MNIPVFHDDQHGTAIISSAAVLNGLELVGKRIEDVRIAVSGAGAAALACLDVMVGLGVRRENVYVCDSKGVIYHGRPGGF DESKNRFAQETALRTLADAVNGADVFLGCSAPGVLTQDMVRTMAPSPIILALANPEPEIRPELAKAVRPDCIIATGRSDY PNQVNNVLCFPYIFRGALDCGATKITEEMKLACVRQIADLTKADISEEVARAYIGQELVFGPDYIIPKPFDSRLILRIAP AVAQAAEDSGVATRPITDMAAYRQELSRFVYSTGMLMQPVFNAARAIPDAHKRVAFAEGEDDRVLRAAQLVLDEGLARPI LIGRPAVIETRIAKAGLRLRLGDDVECVNPEDDPRFRHYWETYHRIMGRHGVTPEAAKAAVRRSTTTIAALMVKLGDADA MLCGMVGRYDGHLEHVRDIIGLKEDASGFAALNALMLDKRTLFIADTFVNEDPSAEQLASIALMAVDEVRRFGIPPKVAF LSHSNYGSSNRASARKMRLAHELFARMAPDVESDGELHGDAALSEEVRRASLMESNMSGEANILICPNLDSANILFNVLK MTGGQGVTVGPILLGTAASAHILTTSATVRRVVNMTALAVASAAARR
Sequences:
>Translated_767_residues MATPLSPAEEALRDAAREYHRSPVRGKISITPTKPLSNQRDLSLAYSPGVAYPCLDIEADPSLAAEYTSRGNLVGVITNG TAVLGLGDIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAEHDPDKLIDIIAAMEPTLGGINLEDIKAPECFYIERKLRER MNIPVFHDDQHGTAIISSAAVLNGLELVGKRIEDVRIAVSGAGAAALACLDVMVGLGVRRENVYVCDSKGVIYHGRPGGF DESKNRFAQETALRTLADAVNGADVFLGCSAPGVLTQDMVRTMAPSPIILALANPEPEIRPELAKAVRPDCIIATGRSDY PNQVNNVLCFPYIFRGALDCGATKITEEMKLACVRQIADLTKADISEEVARAYIGQELVFGPDYIIPKPFDSRLILRIAP AVAQAAEDSGVATRPITDMAAYRQELSRFVYSTGMLMQPVFNAARAIPDAHKRVAFAEGEDDRVLRAAQLVLDEGLARPI LIGRPAVIETRIAKAGLRLRLGDDVECVNPEDDPRFRHYWETYHRIMGRHGVTPEAAKAAVRRSTTTIAALMVKLGDADA MLCGMVGRYDGHLEHVRDIIGLKEDASGFAALNALMLDKRTLFIADTFVNEDPSAEQLASIALMAVDEVRRFGIPPKVAF LSHSNYGSSNRASARKMRLAHELFARMAPDVESDGELHGDAALSEEVRRASLMESNMSGEANILICPNLDSANILFNVLK MTGGQGVTVGPILLGTAASAHILTTSATVRRVVNMTALAVASAAARR >Mature_766_residues ATPLSPAEEALRDAAREYHRSPVRGKISITPTKPLSNQRDLSLAYSPGVAYPCLDIEADPSLAAEYTSRGNLVGVITNGT AVLGLGDIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAEHDPDKLIDIIAAMEPTLGGINLEDIKAPECFYIERKLRERM NIPVFHDDQHGTAIISSAAVLNGLELVGKRIEDVRIAVSGAGAAALACLDVMVGLGVRRENVYVCDSKGVIYHGRPGGFD ESKNRFAQETALRTLADAVNGADVFLGCSAPGVLTQDMVRTMAPSPIILALANPEPEIRPELAKAVRPDCIIATGRSDYP NQVNNVLCFPYIFRGALDCGATKITEEMKLACVRQIADLTKADISEEVARAYIGQELVFGPDYIIPKPFDSRLILRIAPA VAQAAEDSGVATRPITDMAAYRQELSRFVYSTGMLMQPVFNAARAIPDAHKRVAFAEGEDDRVLRAAQLVLDEGLARPIL IGRPAVIETRIAKAGLRLRLGDDVECVNPEDDPRFRHYWETYHRIMGRHGVTPEAAKAAVRRSTTTIAALMVKLGDADAM LCGMVGRYDGHLEHVRDIIGLKEDASGFAALNALMLDKRTLFIADTFVNEDPSAEQLASIALMAVDEVRRFGIPPKVAFL SHSNYGSSNRASARKMRLAHELFARMAPDVESDGELHGDAALSEEVRRASLMESNMSGEANILICPNLDSANILFNVLKM TGGQGVTVGPILLGTAASAHILTTSATVRRVVNMTALAVASAAARR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=357, Percent_Identity=26.890756302521, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI4505145, Length=358, Percent_Identity=28.2122905027933, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI62420882, Length=368, Percent_Identity=25.2717391304348, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI62420880, Length=368, Percent_Identity=25.2717391304348, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI239049447, Length=368, Percent_Identity=25.2717391304348, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI270265879, Length=317, Percent_Identity=29.3375394321767, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1788806, Length=759, Percent_Identity=61.133069828722, Blast_Score=949, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=316, Percent_Identity=31.6455696202532, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI1788635, Length=318, Percent_Identity=27.6729559748428, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI87081919, Length=294, Percent_Identity=23.1292517006803, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=270, Percent_Identity=29.2592592592593, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24646388, Length=349, Percent_Identity=30.945558739255, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646386, Length=349, Percent_Identity=30.945558739255, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI281362672, Length=478, Percent_Identity=26.5690376569038, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362674, Length=478, Percent_Identity=26.5690376569038, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356279, Length=478, Percent_Identity=26.5690376569038, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI78707242, Length=341, Percent_Identity=25.5131964809384, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI78707238, Length=341, Percent_Identity=25.5131964809384, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI78707240, Length=341, Percent_Identity=25.5131964809384, Blast_Score=74, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82668; Mature: 82537
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPLSPAEEALRDAAREYHRSPVRGKISITPTKPLSNQRDLSLAYSPGVAYPCLDIEAD CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCC PSLAAEYTSRGNLVGVITNGTAVLGLGDIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAE CCHHHHHCCCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCHHHHHCCCEEEEEEECC HDPDKLIDIIAAMEPTLGGINLEDIKAPECFYIERKLRERMNIPVFHDDQHGTAIISSAA CCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH VLNGLELVGKRIEDVRIAVSGAGAAALACLDVMVGLGVRRENVYVCDSKGVIYHGRPGGF HHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCEECCEEEECCCCEEEECCCCCC DESKNRFAQETALRTLADAVNGADVFLGCSAPGVLTQDMVRTMAPSPIILALANPEPEIR CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC PELAKAVRPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEEMKLACVRQIADL HHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TKADISEEVARAYIGQELVFGPDYIIPKPFDSRLILRIAPAVAQAAEDSGVATRPITDMA HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHH AYRQELSRFVYSTGMLMQPVFNAARAIPDAHKRVAFAEGEDDRVLRAAQLVLDEGLARPI HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCEEECCCCCHHHHHHHHHHHHCCCCCCE LIGRPAVIETRIAKAGLRLRLGDDVECVNPEDDPRFRHYWETYHRIMGRHGVTPEAAKAA EECCCHHHHHHHHHCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH VRRSTTTIAALMVKLGDADAMLCGMVGRYDGHLEHVRDIIGLKEDASGFAALNALMLDKR HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC TLFIADTFVNEDPSAEQLASIALMAVDEVRRFGIPPKVAFLSHSNYGSSNRASARKMRLA EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH HELFARMAPDVESDGELHGDAALSEEVRRASLMESNMSGEANILICPNLDSANILFNVLK HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH MTGGQGVTVGPILLGTAASAHILTTSATVRRVVNMTALAVASAAARR HCCCCCCEECHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATPLSPAEEALRDAAREYHRSPVRGKISITPTKPLSNQRDLSLAYSPGVAYPCLDIEAD CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCC PSLAAEYTSRGNLVGVITNGTAVLGLGDIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAE CCHHHHHCCCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCHHHHHCCCEEEEEEECC HDPDKLIDIIAAMEPTLGGINLEDIKAPECFYIERKLRERMNIPVFHDDQHGTAIISSAA CCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH VLNGLELVGKRIEDVRIAVSGAGAAALACLDVMVGLGVRRENVYVCDSKGVIYHGRPGGF HHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCEECCEEEECCCCEEEECCCCCC DESKNRFAQETALRTLADAVNGADVFLGCSAPGVLTQDMVRTMAPSPIILALANPEPEIR CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC PELAKAVRPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEEMKLACVRQIADL HHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TKADISEEVARAYIGQELVFGPDYIIPKPFDSRLILRIAPAVAQAAEDSGVATRPITDMA HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHH AYRQELSRFVYSTGMLMQPVFNAARAIPDAHKRVAFAEGEDDRVLRAAQLVLDEGLARPI HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCEEECCCCCHHHHHHHHHHHHCCCCCCE LIGRPAVIETRIAKAGLRLRLGDDVECVNPEDDPRFRHYWETYHRIMGRHGVTPEAAKAA EECCCHHHHHHHHHCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH VRRSTTTIAALMVKLGDADAMLCGMVGRYDGHLEHVRDIIGLKEDASGFAALNALMLDKR HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC TLFIADTFVNEDPSAEQLASIALMAVDEVRRFGIPPKVAFLSHSNYGSSNRASARKMRLA EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH HELFARMAPDVESDGELHGDAALSEEVRRASLMESNMSGEANILICPNLDSANILFNVLK HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH MTGGQGVTVGPILLGTAASAHILTTSATVRRVVNMTALAVASAAARR HCCCCCCEECHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]