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The map label for this gene is yodQ [H]

Identifier: 91787317

GI number: 91787317

Start: 1468645

End: 1469916

Strand: Reverse

Name: yodQ [H]

Synonym: Bpro_1422

Alternate gene names: 91787317

Gene position: 1469916-1468645 (Counterclockwise)

Preceding gene: 91787318

Following gene: 91787316

Centisome position: 28.27

GC content: 64.7

Gene sequence:

>1272_bases
ATGACCACCAACACCAACACCGATACCAACACGAACTCCGACACCGCCTACAAGCAGCTTGACCGCTGGATCGACGACCA
CTTCGACGAGGAAGTGCGATTCCTTCAGGAACTCATACGCGTACCCACCGACACGCCGCCGGGCAACAACGCGCCACACG
CCGAGCGCACCGCCGAGCTGCTCCAGGCCTTTGGCTTTGAGGCTGAAAAGCACCCCGTGCCCGAGGCCGATGTCCGGGCC
TATGGACTTGAGTCCATCACCAACCTGATCGTGCGCCGCCGGTATTCGAAACCCGGCGAAGGACGGACGATTGCACTCAA
TGCCCACGGCGATGTGGTGCCGCCCGGCGAGGGCTGGACCAAAGACCCGTATGGCGGCGAGATCGAAGACGGCAGGATTT
ACGGGCGCGCCGCGGCCGTCAGCAAATGCGATTTCGCCAGCTTCACCTTTGCCGTGCGGGCACTTGAGGCACTGGGCGCG
CCACTGAAAGGCGGTGTCGAGCTGCACTTCACCTATGACGAAGAGTTTGGCGGCGAAATGGGGCCGGGCTGGCTGCTGCG
CCAGGGCCTGACCCACCCCGACCTGATGATCGCGGCGGGCTTTTCGTATGAAGTCGTGACCGCCCACAATGGCTGCCTGC
AGATGGAAGTCACCGTGCACGGCAAGATGGCCCACGCAGCCATTCCCGACACCGGCGTTGACGCGCTGCAGGGCGCGGTG
CATATCCTCAATGCCCTGTATGCGCAAAACGCGCTATACCGCAAGGTCACCTCCGGGGTCGCGGGCATCAGCCATCCCTA
CCTGAACGTCGGCCGCATCGAGGGCGGGACCAACACCAACGTCGTGCCCGGCAAGGTGACCTTCAAGCTGGACCGCCGCA
TGATCCCGGAAGAAAACCCGGTCGAAGTCGAAGCCACCATCCGCCAGGTGATTGCCGACGCCGCTGCCGGCTGTGCGGGC
ATCACCGTGAACATCAAGCGGCTGCTGCTGGCCAACTCGATGAAGCCGCTGGCGGGCAACATGCCTCTGGTGGACGCGAT
CCAGAAGCATGGCGAGGCGCTGTTCGGCCAGAAGATCCCGGCCATGGGCACGCCGCTGTATACCGATGTGCGCCTGTACG
CCGAGGCCGGCGTGCCGGGTGTGATCTACGGCGCCGGGCCGCGCACCGTGCTCGAATCGCACGCCAAGCGCGCCGACGAG
CGGCTGGAGCTGGAAGACCTGCGCCGTGCCACCAAGGTGATAGCCCGCACGCTGGTGGATTTGCTGGCCTGA

Upstream 100 bases:

>100_bases
GCATCAGCCACAACCCGCTGGAGAGCACCACCAGCGACGACATTCAGCTCGCCGCGGACGCCTTCCAGCGCCTGCTGGCC
AACCTGGCTTTGGAAACCCC

Downstream 100 bases:

>100_bases
CCTGGCTGGCAAAACCCCCGAAAGGCCGGGACAGCCGGGGACGGTGAGTTGCCCGGCGCCCGCAGAATCGTCATGGTGCG
CGCAAACTGCGGGCAGCCGA

Product: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase

Products: Acetate; Ornithine [C]

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTTNTNTDTNTNSDTAYKQLDRWIDDHFDEEVRFLQELIRVPTDTPPGNNAPHAERTAELLQAFGFEAEKHPVPEADVRA
YGLESITNLIVRRRYSKPGEGRTIALNAHGDVVPPGEGWTKDPYGGEIEDGRIYGRAAAVSKCDFASFTFAVRALEALGA
PLKGGVELHFTYDEEFGGEMGPGWLLRQGLTHPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAHAAIPDTGVDALQGAV
HILNALYAQNALYRKVTSGVAGISHPYLNVGRIEGGTNTNVVPGKVTFKLDRRMIPEENPVEVEATIRQVIADAAAGCAG
ITVNIKRLLLANSMKPLAGNMPLVDAIQKHGEALFGQKIPAMGTPLYTDVRLYAEAGVPGVIYGAGPRTVLESHAKRADE
RLELEDLRRATKVIARTLVDLLA

Sequences:

>Translated_423_residues
MTTNTNTDTNTNSDTAYKQLDRWIDDHFDEEVRFLQELIRVPTDTPPGNNAPHAERTAELLQAFGFEAEKHPVPEADVRA
YGLESITNLIVRRRYSKPGEGRTIALNAHGDVVPPGEGWTKDPYGGEIEDGRIYGRAAAVSKCDFASFTFAVRALEALGA
PLKGGVELHFTYDEEFGGEMGPGWLLRQGLTHPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAHAAIPDTGVDALQGAV
HILNALYAQNALYRKVTSGVAGISHPYLNVGRIEGGTNTNVVPGKVTFKLDRRMIPEENPVEVEATIRQVIADAAAGCAG
ITVNIKRLLLANSMKPLAGNMPLVDAIQKHGEALFGQKIPAMGTPLYTDVRLYAEAGVPGVIYGAGPRTVLESHAKRADE
RLELEDLRRATKVIARTLVDLLA
>Mature_422_residues
TTNTNTDTNTNSDTAYKQLDRWIDDHFDEEVRFLQELIRVPTDTPPGNNAPHAERTAELLQAFGFEAEKHPVPEADVRAY
GLESITNLIVRRRYSKPGEGRTIALNAHGDVVPPGEGWTKDPYGGEIEDGRIYGRAAAVSKCDFASFTFAVRALEALGAP
LKGGVELHFTYDEEFGGEMGPGWLLRQGLTHPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAHAAIPDTGVDALQGAVH
ILNALYAQNALYRKVTSGVAGISHPYLNVGRIEGGTNTNVVPGKVTFKLDRRMIPEENPVEVEATIRQVIADAAAGCAGI
TVNIKRLLLANSMKPLAGNMPLVDAIQKHGEALFGQKIPAMGTPLYTDVRLYAEAGVPGVIYGAGPRTVLESHAKRADER
LELEDLRRATKVIARTLVDLLA

Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Homo sapiens, GI4501901, Length=331, Percent_Identity=25.3776435045317, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI1790395, Length=380, Percent_Identity=24.7368421052632, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788816, Length=292, Percent_Identity=26.027397260274, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356353, Length=419, Percent_Identity=24.3436754176611, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24649206, Length=301, Percent_Identity=26.9102990033223, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649210, Length=381, Percent_Identity=24.1469816272966, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649208, Length=419, Percent_Identity=25.2983293556086, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24649202, Length=302, Percent_Identity=24.5033112582781, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24649204, Length=302, Percent_Identity=24.5033112582781, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24649212, Length=414, Percent_Identity=24.8792270531401, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010182
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.16 [C]

Molecular weight: Translated: 45839; Mature: 45707

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNTNTDTNTNSDTAYKQLDRWIDDHFDEEVRFLQELIRVPTDTPPGNNAPHAERTAEL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LQAFGFEAEKHPVPEADVRAYGLESITNLIVRRRYSKPGEGRTIALNAHGDVVPPGEGWT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
KDPYGGEIEDGRIYGRAAAVSKCDFASFTFAVRALEALGAPLKGGVELHFTYDEEFGGEM
CCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHCCCCC
GPGWLLRQGLTHPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAHAAIPDTGVDALQGAV
CCCHHHHCCCCCCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
HILNALYAQNALYRKVTSGVAGISHPYLNVGRIEGGTNTNVVPGKVTFKLDRRMIPEENP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
VEVEATIRQVIADAAAGCAGITVNIKRLLLANSMKPLAGNMPLVDAIQKHGEALFGQKIP
CHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCC
AMGTPLYTDVRLYAEAGVPGVIYGAGPRTVLESHAKRADERLELEDLRRATKVIARTLVD
CCCCCCHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LLA
HHC
>Mature Secondary Structure 
TTNTNTDTNTNSDTAYKQLDRWIDDHFDEEVRFLQELIRVPTDTPPGNNAPHAERTAEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LQAFGFEAEKHPVPEADVRAYGLESITNLIVRRRYSKPGEGRTIALNAHGDVVPPGEGWT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
KDPYGGEIEDGRIYGRAAAVSKCDFASFTFAVRALEALGAPLKGGVELHFTYDEEFGGEM
CCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHCCCCC
GPGWLLRQGLTHPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAHAAIPDTGVDALQGAV
CCCHHHHCCCCCCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
HILNALYAQNALYRKVTSGVAGISHPYLNVGRIEGGTNTNVVPGKVTFKLDRRMIPEENP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
VEVEATIRQVIADAAAGCAGITVNIKRLLLANSMKPLAGNMPLVDAIQKHGEALFGQKIP
CHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCC
AMGTPLYTDVRLYAEAGVPGVIYGAGPRTVLESHAKRADERLELEDLRRATKVIARTLVD
CCCCCCHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LLA
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Glutathione. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N2-Acetyl-L-ornithine; H2O [C]

Specific reaction: N2-Acetyl-L-ornithine + H2O --> Acetate + Ornithine [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]