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The map label for this gene is ureD

Identifier: 91787309

GI number: 91787309

Start: 1454275

End: 1455105

Strand: Reverse

Name: ureD

Synonym: Bpro_1414

Alternate gene names: 91787309

Gene position: 1455105-1454275 (Counterclockwise)

Preceding gene: 91787310

Following gene: 91787308

Centisome position: 27.98

GC content: 68.71

Gene sequence:

>831_bases
ATGACCTGGAACGCGACGCTCGCACTCGACTACACACGGCAAGCCGGCAAGACGGTTGCCCACTTTCGCCACAGCGGGCC
GCTGCGTATTTTGCAGAGCCTCTATCCCGAGGGCGATGCCATCTGCCACAACGTGATCGTGCACCCGCCCGGCGGGCTGG
TGGGCGGCGACACCCTGGACCTGCAATTCAGCGCGAGCGCCGGCGCACACGGCCTCATCACCACGCCCGGCGCCACACGC
TTTTACCGCTCCACCGGAGAGCCCGCGCTGCAGCGCACCCATCTGACGCTCGAGGCCGGTGCGCGCATGGAGTGGCTGCC
GCTGGAGGCCATCTGCTACAGCGGCTGCCTCGCTGAAAACCACCTGACCATGACGCTGGCCCCGGGTGCCGAGCTGATCG
GCTGGGACATCACCGCGCTGGGCCTGCCCGCTGCCAGCCTGCCCTTTGCACACGGCAGCTTTTGCCAGCATATTGAAGTG
CCCGGCGTGTGGCTGGAGCGGGCGCGCATACAGGCCAGCGACACCCTGCTGATGAGCAGCCCACTGGGCATGGCGGGGCA
CCGCTGCGTTGCCTCGCTGTTTTTTGTGGCGGGCAGCAAGCTCGACCGCCACCGCCGCCAGCAGGCGCTGGACACGGCGC
GCCAGATCATCGAAGCGCACCCGCTGTCTGCAACGGCGGGCGCCACCAGCCCCGATGGGCAGGTGGTGGTGGTCAGGGTG
CTGGCGCCGGTGGTCGAGCCCGCCATGGCGCTGCTCAGGCAGGTGTGGCTGGCCTGGCGCAGTCATTTCTGGCAGCAGGC
CGCCTCCAGCCCGCGCATCTGGTCGATGTAA

Upstream 100 bases:

>100_bases
GGAATCAACGGTAAAAAGTGGCCGTAGCCCTTCAGGAAAGCGAGCTGGCAGCTATGAACTTCATAGCAAGCCAGGTCGTC
AGGCACGTTAAACTCGGCCC

Downstream 100 bases:

>100_bases
AGCGGGGCAGCCTTTCGCAGGCTGATTCGCTCCAGTTCCTGCGGTGCCTGAGCCGGGAGGAAAACCCTTGAAAGACCTGT
CCTACAGCCGAATTCGGCTC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTWNATLALDYTRQAGKTVAHFRHSGPLRILQSLYPEGDAICHNVIVHPPGGLVGGDTLDLQFSASAGAHGLITTPGATR
FYRSTGEPALQRTHLTLEAGARMEWLPLEAICYSGCLAENHLTMTLAPGAELIGWDITALGLPAASLPFAHGSFCQHIEV
PGVWLERARIQASDTLLMSSPLGMAGHRCVASLFFVAGSKLDRHRRQQALDTARQIIEAHPLSATAGATSPDGQVVVVRV
LAPVVEPAMALLRQVWLAWRSHFWQQAASSPRIWSM

Sequences:

>Translated_276_residues
MTWNATLALDYTRQAGKTVAHFRHSGPLRILQSLYPEGDAICHNVIVHPPGGLVGGDTLDLQFSASAGAHGLITTPGATR
FYRSTGEPALQRTHLTLEAGARMEWLPLEAICYSGCLAENHLTMTLAPGAELIGWDITALGLPAASLPFAHGSFCQHIEV
PGVWLERARIQASDTLLMSSPLGMAGHRCVASLFFVAGSKLDRHRRQQALDTARQIIEAHPLSATAGATSPDGQVVVVRV
LAPVVEPAMALLRQVWLAWRSHFWQQAASSPRIWSM
>Mature_275_residues
TWNATLALDYTRQAGKTVAHFRHSGPLRILQSLYPEGDAICHNVIVHPPGGLVGGDTLDLQFSASAGAHGLITTPGATRF
YRSTGEPALQRTHLTLEAGARMEWLPLEAICYSGCLAENHLTMTLAPGAELIGWDITALGLPAASLPFAHGSFCQHIEVP
GVWLERARIQASDTLLMSSPLGMAGHRCVASLFFVAGSKLDRHRRQQALDTARQIIEAHPLSATAGATSPDGQVVVVRVL
APVVEPAMALLRQVWLAWRSHFWQQAASSPRIWSM

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_POLSJ (Q12DM9)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_548261.1
- STRING:   Q12DM9
- GeneID:   4011794
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1414
- NMPDR:   fig|296591.1.peg.1829
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   RFYRSTG
- ProtClustDB:   CLSK722439
- BioCyc:   PSP296591:BPRO_1414-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 29833; Mature: 29701

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWNATLALDYTRQAGKTVAHFRHSGPLRILQSLYPEGDAICHNVIVHPPGGLVGGDTLD
CCCCEEEEEECCHHCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEE
LQFSASAGAHGLITTPGATRFYRSTGEPALQRTHLTLEAGARMEWLPLEAICYSGCLAEN
EEEECCCCCCCEEECCCCHHHHHCCCCHHHHHEEEEEECCCCEEECCHHHHHHHCCEECC
HLTMTLAPGAELIGWDITALGLPAASLPFAHGSFCQHIEVPGVWLERARIQASDTLLMSS
CEEEEECCCCCEECCEEHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEC
PLGMAGHRCVASLFFVAGSKLDRHRRQQALDTARQIIEAHPLSATAGATSPDGQVVVVRV
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH
LAPVVEPAMALLRQVWLAWRSHFWQQAASSPRIWSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TWNATLALDYTRQAGKTVAHFRHSGPLRILQSLYPEGDAICHNVIVHPPGGLVGGDTLD
CCCEEEEEECCHHCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEE
LQFSASAGAHGLITTPGATRFYRSTGEPALQRTHLTLEAGARMEWLPLEAICYSGCLAEN
EEEECCCCCCCEEECCCCHHHHHCCCCHHHHHEEEEEECCCCEEECCHHHHHHHCCEECC
HLTMTLAPGAELIGWDITALGLPAASLPFAHGSFCQHIEVPGVWLERARIQASDTLLMSS
CEEEEECCCCCEECCEEHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEC
PLGMAGHRCVASLFFVAGSKLDRHRRQQALDTARQIIEAHPLSATAGATSPDGQVVVVRV
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH
LAPVVEPAMALLRQVWLAWRSHFWQQAASSPRIWSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA