| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cphA [H]
Identifier: 91787310
GI number: 91787310
Start: 1455262
End: 1457880
Strand: Reverse
Name: cphA [H]
Synonym: Bpro_1415
Alternate gene names: 91787310
Gene position: 1457880-1455262 (Counterclockwise)
Preceding gene: 91787311
Following gene: 91787309
Centisome position: 28.03
GC content: 68.5
Gene sequence:
>2619_bases ATGGAAGTGTCCCGCATTCGGGCCCTGCGCGGGCCCAACCTCTGGAGCCGGCACACGGCGCTGGAAGCCATCGTCGCCTG CACGGCGGCCGAACGGTCTATCGACAGCCTCCCCGGCCTGGAGCCGCGCGTGCGCTCGCTGTTTCCCGGCATGGGCGAGC TGCGCCAGACCGACCATGGCGGCCCCGTCTCACTGGCGCATGTGCTGGAAGCCGCGGCACTGGCGCTGCAGGCAGCAGCC GGCTGCCCGGTCACCTTCAGCCAGACGGCCGTCACCGTGGAACCCGGCACCTACCAGGTGGTTGTCGAGTACAGCGAAGA GGCGGTGGGCCGGCTGGCGCTTGAACTGGCGCAGGCCCTGGTCCACGCTGCCCTGCGCGACACCGCGTTTGACCTCGACG CCGCCATCACCCAATTGCGCGATCTGGACGAAGACGAGCGCCTGGGGCCCAGCACCGGCGCCATTGTCGATGCGGCCGTG GCGCGCGGCATTCCCTACCGGCGCCTGACCAAGGGCAGCATGGTGCAGTTCGGCTGGGGCTCCAAACAGCGCCGCATCCA GGCGGCCGAAATCGACGCCACCAGCGCGGTGGCCGAATCGATTGCCCAGGACAAGGACCTCACCAAGAAACTGCTGCGTG CGGCCGGCGTGCCGGTGCCGCTGGGCCGGCCGGTCAGTGACGCGGCAGACGCCTGGACCGTGGCCCAGCAGATTGGCCTG CCGGTTGCCGTCAAACCGCAGGACGGCAACCAGGGCAAGGGCGTCAGCGTCAACATCAGCAGCCGTGAACAGCTTGAAGC CGCCTACCTCGCCGCGGCAGAGTATGGCGAGGTCATGGTCGAGAAATTCCTGCCCGGCAGCGACTTCCGCCTGCTGGTGG TGGGCGACAAGCTGGTGGCGGCCTCGCGGCGCGACCCGCCGCAGGTGGTGGGCGATGGCCTGCACACCGTGCGCGAACTG GTCGACATCGTCAACCAGGACCCGCGGCGCGGCGAAGGCCATGCCACCTCGCTCACCAAGATCCGCTTTGACGATATCGC CGTGGGCCGGCTCGAGGCACAGGATCTCACGCCCGAATCGATTCCCGCCAAGGGACGCCGCGTCATTCTGCGCAACAACG CCAACCTGAGCACCGGCGGCACCGCCACCGACGTGACGGACGATGTGCATCCCGCCGTGGCGGCACGCGCCGTGGCCGCG GCGAAGATGGTGGGCCTGCACATTTGCGGCGTCGACGTGGTCTGCGAAAGCATGCTGCGCCCGCTCGAATCGCAAAGCGG TGGCGTGGTCGAGGTCAATGCCGCGCCCGGCCTGCGCATGCATCTGTCGCCCTCCTACGGCAAGGGCCGCGCCGTGGGCG TGGCCATGATCAACGAGCTGTTCCCGGCCGGCGGAAATGACGTGAATAACGGCCGCATACCGGTGATTGCCGTGACCGGC ACCAACGGCAAGACCACCACCACGCGCCTGATTGCCCACCTGATGACGGCCCATGGCCTGCGCACCGGCATGACCAACAC CGACGGCGTCTGGATCAATGGCCGGCAGACCGACAGCGGTGATTGCAGCGGCCCCAAGAGCGCCCGCAATGTGCTGATGC ATCCCGACGTGGACGCCGCCGTCTTTGAAATCGCGCGCGGCGGTGTGCTGCGTGAGGGCCTGGGCTTTGACCGCTGCGAA GTGGCCGTCGTCACCAACATCGGCAGCGGCGACCACCTGGGGCTCAACTACATCACCACCGTGGAAGACCTGGCGGTGCT CAAGCGCGTGATTGTGCAGAACGTCGCACCCACCGGCTATGCGGTGCTCAATGCGGCAGACCCCATCGTGGCCGAGATGG CAGCCACCTGCCCCGGCAAGGTGATTTATTTCGCGGCGGACCGCCACCACCCGCTGATGGCCACGCACCGCGCGCAGGGC AAGCGCACCGTGTACGTGGACGGCCCGGTGCTGGTGGCCGCCGAAGGCGCGTGGGTCGAGCGCATCCCGCTGGCCGGCAT TCCCGTGACGCGCGGCGGCAGCATTGGCTTTCAGGTCGAAAACGCCATGGCCGCGGTAGCCGCAGCCTGGGCGGCGGGCC TGAACTGGGACACCATCAAAAGCGGGCTGGCCAGCTTTGTCAACGATGCACACAATGCACCGGGCCGCTTCAACGTGATG GACTACCGCGGTGCCACCGTCATTGCCGACTACGGCCACAACCCGGATGCCATGCGCGCCCTGGTGGCGGCGGTCGACGC CATGGCCGCCGCTGCCGGGCAGCGTCGCAGCGTGGTGATCAGCGGCGCCGGCGACCGACGCGACAGCGACATCCGCGACC AGACCGTGATCCTGGGCGCCGCCTTTGACGACGTCATCCTGTACCAGGACGCCGCCCAGCGCGGCCGTGCCGACGGCGAA GTGATGGGGCTGCTGCGCGAAGGCCTGGAAGGGCTGAACAAGGCCAGCCGCACCAGCCGGATCGATGAAATCCGCGGTGA ATTCCTGGCCATTGACACGGCGCTTGGGCGCCTGCAGCCGGGCGACCTGTGCCTGGTGCTGGTGGACCAGGTGCAGGAAG CGCTGGACCACCTGGCGCTGCGCGTGAAGGAAGCCAAAGACCAGACCGTCGCAGCCTGA
Upstream 100 bases:
>100_bases CCGTCGGCGCCGCCTGGGCATTGGGCATACCGCTCAATCTGATCGGCGCAGGCCTGGAAGCCTTTGAAACCACCCCTAAA ACTGCCGGGAGTGCAGAGTA
Downstream 100 bases:
>100_bases AGCACATTCCGGATTGCCGCCCTGGCAACAGTTCAGGCCGCATTTCAGGAAACCCCGGAATCAACGGTAAAAAGTGGCCG TAGCCCTTCAGGAAAGCGAG
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 872; Mature: 872
Protein sequence:
>872_residues MEVSRIRALRGPNLWSRHTALEAIVACTAAERSIDSLPGLEPRVRSLFPGMGELRQTDHGGPVSLAHVLEAAALALQAAA GCPVTFSQTAVTVEPGTYQVVVEYSEEAVGRLALELAQALVHAALRDTAFDLDAAITQLRDLDEDERLGPSTGAIVDAAV ARGIPYRRLTKGSMVQFGWGSKQRRIQAAEIDATSAVAESIAQDKDLTKKLLRAAGVPVPLGRPVSDAADAWTVAQQIGL PVAVKPQDGNQGKGVSVNISSREQLEAAYLAAAEYGEVMVEKFLPGSDFRLLVVGDKLVAASRRDPPQVVGDGLHTVREL VDIVNQDPRRGEGHATSLTKIRFDDIAVGRLEAQDLTPESIPAKGRRVILRNNANLSTGGTATDVTDDVHPAVAARAVAA AKMVGLHICGVDVVCESMLRPLESQSGGVVEVNAAPGLRMHLSPSYGKGRAVGVAMINELFPAGGNDVNNGRIPVIAVTG TNGKTTTTRLIAHLMTAHGLRTGMTNTDGVWINGRQTDSGDCSGPKSARNVLMHPDVDAAVFEIARGGVLREGLGFDRCE VAVVTNIGSGDHLGLNYITTVEDLAVLKRVIVQNVAPTGYAVLNAADPIVAEMAATCPGKVIYFAADRHHPLMATHRAQG KRTVYVDGPVLVAAEGAWVERIPLAGIPVTRGGSIGFQVENAMAAVAAAWAAGLNWDTIKSGLASFVNDAHNAPGRFNVM DYRGATVIADYGHNPDAMRALVAAVDAMAAAAGQRRSVVISGAGDRRDSDIRDQTVILGAAFDDVILYQDAAQRGRADGE VMGLLREGLEGLNKASRTSRIDEIRGEFLAIDTALGRLQPGDLCLVLVDQVQEALDHLALRVKEAKDQTVAA
Sequences:
>Translated_872_residues MEVSRIRALRGPNLWSRHTALEAIVACTAAERSIDSLPGLEPRVRSLFPGMGELRQTDHGGPVSLAHVLEAAALALQAAA GCPVTFSQTAVTVEPGTYQVVVEYSEEAVGRLALELAQALVHAALRDTAFDLDAAITQLRDLDEDERLGPSTGAIVDAAV ARGIPYRRLTKGSMVQFGWGSKQRRIQAAEIDATSAVAESIAQDKDLTKKLLRAAGVPVPLGRPVSDAADAWTVAQQIGL PVAVKPQDGNQGKGVSVNISSREQLEAAYLAAAEYGEVMVEKFLPGSDFRLLVVGDKLVAASRRDPPQVVGDGLHTVREL VDIVNQDPRRGEGHATSLTKIRFDDIAVGRLEAQDLTPESIPAKGRRVILRNNANLSTGGTATDVTDDVHPAVAARAVAA AKMVGLHICGVDVVCESMLRPLESQSGGVVEVNAAPGLRMHLSPSYGKGRAVGVAMINELFPAGGNDVNNGRIPVIAVTG TNGKTTTTRLIAHLMTAHGLRTGMTNTDGVWINGRQTDSGDCSGPKSARNVLMHPDVDAAVFEIARGGVLREGLGFDRCE VAVVTNIGSGDHLGLNYITTVEDLAVLKRVIVQNVAPTGYAVLNAADPIVAEMAATCPGKVIYFAADRHHPLMATHRAQG KRTVYVDGPVLVAAEGAWVERIPLAGIPVTRGGSIGFQVENAMAAVAAAWAAGLNWDTIKSGLASFVNDAHNAPGRFNVM DYRGATVIADYGHNPDAMRALVAAVDAMAAAAGQRRSVVISGAGDRRDSDIRDQTVILGAAFDDVILYQDAAQRGRADGE VMGLLREGLEGLNKASRTSRIDEIRGEFLAIDTALGRLQPGDLCLVLVDQVQEALDHLALRVKEAKDQTVAA >Mature_872_residues MEVSRIRALRGPNLWSRHTALEAIVACTAAERSIDSLPGLEPRVRSLFPGMGELRQTDHGGPVSLAHVLEAAALALQAAA GCPVTFSQTAVTVEPGTYQVVVEYSEEAVGRLALELAQALVHAALRDTAFDLDAAITQLRDLDEDERLGPSTGAIVDAAV ARGIPYRRLTKGSMVQFGWGSKQRRIQAAEIDATSAVAESIAQDKDLTKKLLRAAGVPVPLGRPVSDAADAWTVAQQIGL PVAVKPQDGNQGKGVSVNISSREQLEAAYLAAAEYGEVMVEKFLPGSDFRLLVVGDKLVAASRRDPPQVVGDGLHTVREL VDIVNQDPRRGEGHATSLTKIRFDDIAVGRLEAQDLTPESIPAKGRRVILRNNANLSTGGTATDVTDDVHPAVAARAVAA AKMVGLHICGVDVVCESMLRPLESQSGGVVEVNAAPGLRMHLSPSYGKGRAVGVAMINELFPAGGNDVNNGRIPVIAVTG TNGKTTTTRLIAHLMTAHGLRTGMTNTDGVWINGRQTDSGDCSGPKSARNVLMHPDVDAAVFEIARGGVLREGLGFDRCE VAVVTNIGSGDHLGLNYITTVEDLAVLKRVIVQNVAPTGYAVLNAADPIVAEMAATCPGKVIYFAADRHHPLMATHRAQG KRTVYVDGPVLVAAEGAWVERIPLAGIPVTRGGSIGFQVENAMAAVAAAWAAGLNWDTIKSGLASFVNDAHNAPGRFNVM DYRGATVIADYGHNPDAMRALVAAVDAMAAAAGQRRSVVISGAGDRRDSDIRDQTVILGAAFDDVILYQDAAQRGRADGE VMGLLREGLEGLNKASRTSRIDEIRGEFLAIDTALGRLQPGDLCLVLVDQVQEALDHLALRVKEAKDQTVAA
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 92020; Mature: 92020
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS50975 ATP_GRASP ; PS01011 FOLYLPOLYGLU_SYNT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSRIRALRGPNLWSRHTALEAIVACTAAERSIDSLPGLEPRVRSLFPGMGELRQTDHG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCC GPVSLAHVLEAAALALQAAAGCPVTFSQTAVTVEPGTYQVVVEYSEEAVGRLALELAQAL CCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH VHAALRDTAFDLDAAITQLRDLDEDERLGPSTGAIVDAAVARGIPYRRLTKGSMVQFGWG HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEECCC SKQRRIQAAEIDATSAVAESIAQDKDLTKKLLRAAGVPVPLGRPVSDAADAWTVAQQIGL CCCCEEEHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC PVAVKPQDGNQGKGVSVNISSREQLEAAYLAAAEYGEVMVEKFLPGSDFRLLVVGDKLVA CEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC ASRRDPPQVVGDGLHTVRELVDIVNQDPRRGEGHATSLTKIRFDDIAVGRLEAQDLTPES CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEECEEECCCCCCCC IPAKGRRVILRNNANLSTGGTATDVTDDVHPAVAARAVAAAKMVGLHICGVDVVCESMLR CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH PLESQSGGVVEVNAAPGLRMHLSPSYGKGRAVGVAMINELFPAGGNDVNNGRIPVIAVTG HHHCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC TNGKTTTTRLIAHLMTAHGLRTGMTNTDGVWINGRQTDSGDCSGPKSARNVLMHPDVDAA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHCCEEECCCCHHH VFEIARGGVLREGLGFDRCEVAVVTNIGSGDHLGLNYITTVEDLAVLKRVIVQNVAPTGY HHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE AVLNAADPIVAEMAATCPGKVIYFAADRHHPLMATHRAQGKRTVYVDGPVLVAAEGAWVE EEEECCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHCCCCCEEEEECCCEEEEECCCCEE RIPLAGIPVTRGGSIGFQVENAMAAVAAAWAAGLNWDTIKSGLASFVNDAHNAPGRFNVM CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE DYRGATVIADYGHNPDAMRALVAAVDAMAAAAGQRRSVVISGAGDRRDSDIRDQTVILGA EECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEE AFDDVILYQDAAQRGRADGEVMGLLREGLEGLNKASRTSRIDEIRGEFLAIDTALGRLQP CCCHHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCC GDLCLVLVDQVQEALDHLALRVKEAKDQTVAA CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEVSRIRALRGPNLWSRHTALEAIVACTAAERSIDSLPGLEPRVRSLFPGMGELRQTDHG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCC GPVSLAHVLEAAALALQAAAGCPVTFSQTAVTVEPGTYQVVVEYSEEAVGRLALELAQAL CCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH VHAALRDTAFDLDAAITQLRDLDEDERLGPSTGAIVDAAVARGIPYRRLTKGSMVQFGWG HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEECCC SKQRRIQAAEIDATSAVAESIAQDKDLTKKLLRAAGVPVPLGRPVSDAADAWTVAQQIGL CCCCEEEHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC PVAVKPQDGNQGKGVSVNISSREQLEAAYLAAAEYGEVMVEKFLPGSDFRLLVVGDKLVA CEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC ASRRDPPQVVGDGLHTVRELVDIVNQDPRRGEGHATSLTKIRFDDIAVGRLEAQDLTPES CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEEECEEECCCCCCCC IPAKGRRVILRNNANLSTGGTATDVTDDVHPAVAARAVAAAKMVGLHICGVDVVCESMLR CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH PLESQSGGVVEVNAAPGLRMHLSPSYGKGRAVGVAMINELFPAGGNDVNNGRIPVIAVTG HHHCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEC TNGKTTTTRLIAHLMTAHGLRTGMTNTDGVWINGRQTDSGDCSGPKSARNVLMHPDVDAA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHCCEEECCCCHHH VFEIARGGVLREGLGFDRCEVAVVTNIGSGDHLGLNYITTVEDLAVLKRVIVQNVAPTGY HHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE AVLNAADPIVAEMAATCPGKVIYFAADRHHPLMATHRAQGKRTVYVDGPVLVAAEGAWVE EEEECCCHHHHHHHHCCCCCEEEEEECCCCCCEEHHCCCCCEEEEECCCEEEEECCCCEE RIPLAGIPVTRGGSIGFQVENAMAAVAAAWAAGLNWDTIKSGLASFVNDAHNAPGRFNVM CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE DYRGATVIADYGHNPDAMRALVAAVDAMAAAAGQRRSVVISGAGDRRDSDIRDQTVILGA EECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEE AFDDVILYQDAAQRGRADGEVMGLLREGLEGLNKASRTSRIDEIRGEFLAIDTALGRLQP CCCHHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCC GDLCLVLVDQVQEALDHLALRVKEAKDQTVAA CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]