| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787259
Identifier: 91787259
GI number: 91787259
Start: 1404898
End: 1405935
Strand: Reverse
Name: 91787259
Synonym: Bpro_1364
Alternate gene names: NA
Gene position: 1405935-1404898 (Counterclockwise)
Preceding gene: 91787265
Following gene: 91787258
Centisome position: 27.04
GC content: 60.6
Gene sequence:
>1038_bases ATGCTACTGTGCAACTTCAACGTCAACAACCTGTTTGTGCGCTACAAGTTCGGGAAGACATTCCCGGGCGACCAAGGTGG CAAGAGCCGGGTGACCAACCCCAATGTGGGCTATTTGCCGCTCTACCAGAAGGGCGCCTTCGAGATCTTCAACGCCGAGC AGCGCAAGCTGGCAGCGCTGGCCATTACCCAGGGCAATACCGTGCTGCCCGACGTTGTGTGCATACAGGAAGTGGAGAGC CTGATTGCGTTGCGCGAGTTCAATGAACGCTTCCTGGCAGCGGCTTATCCGTATGCCGTGGTGCTGGACTCGCGTGATTT GCGGCAGATTGATGTGGGCATCTTGTCGAAGTACCCGCTTGACAGTGTGGCCACCCATGTGGACGACACGGCCGCCGGCA AATACATCTTCAGCCGCGACTGCCTGGAGGTGCGGCTGCGCGTCAAAAAGACCGCGTTCGTCACCCTGTTCATCAACCAC TTCAAATCCAAGCTGGCGCTGGGCGCCAATGAAGAAGCCCGCAACCGGGAGCGCGCCGCAGCCAATGAGAAGCGCCAGCT CCAGGCCGACACCGTGGCCAAGCTGCTGAAGACCCGGTTTCCCGGCGCGGCCTTCCAGTCCGACTATTTCGCCGTGCTCG GTGATTTGAACGACACGCCGCTGGCACCCCAGCTCTCCCGGCTCTGCCTGAAGTCGGGCCTGGTGGATGCGCTGGCCATG CTGGAGCCGGAGGAACGGTGGACGCATTACTGGAAAGCCAAAAACAGCGTGTCGCAACTGGACCATGTGCTGCTGTCCCC CGCCCTGGCCGGCAAGCTGAAGCAAAACGGAATCACCGTCGAGCGGCGCGGCATCGGCTTTCGGGCTGAATCGAAGAAAG TCGACGGCGGCTACCTGCCCAGGCAGGTGCGGGTGGAAGCCATCGAAGACGACCCCGATCCGCTGTCGATTGATTTCCAG TTTGAGCGCTTCAAGGACGTGTCCAGCCGCAACGTGGCCTCGGACCACTGTGCGATCTTCCTGAAATTTGCGATCTGA
Upstream 100 bases:
>100_bases CCGCCCCGCCGGTCTGCCCGCCGACATGCTGCAATTGGAGGATGCGCCGCACGGCCCCGCTGGATAAACTGCGCCTGTCA TCCACTCCAGGGGGCGTGTC
Downstream 100 bases:
>100_bases GCTGCGGGCCACAAGAAGGCCACACTTCAGGTGCGGACAAGACTTCGTGGCAACATGGGCCGAATGAGGCGGGATGACGA GAGGTATGAGGCAAAGATAT
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Hydrolase; Endonuclease
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLLCNFNVNNLFVRYKFGKTFPGDQGGKSRVTNPNVGYLPLYQKGAFEIFNAEQRKLAALAITQGNTVLPDVVCIQEVES LIALREFNERFLAAAYPYAVVLDSRDLRQIDVGILSKYPLDSVATHVDDTAAGKYIFSRDCLEVRLRVKKTAFVTLFINH FKSKLALGANEEARNRERAAANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAM LEPEERWTHYWKAKNSVSQLDHVLLSPALAGKLKQNGITVERRGIGFRAESKKVDGGYLPRQVRVEAIEDDPDPLSIDFQ FERFKDVSSRNVASDHCAIFLKFAI
Sequences:
>Translated_345_residues MLLCNFNVNNLFVRYKFGKTFPGDQGGKSRVTNPNVGYLPLYQKGAFEIFNAEQRKLAALAITQGNTVLPDVVCIQEVES LIALREFNERFLAAAYPYAVVLDSRDLRQIDVGILSKYPLDSVATHVDDTAAGKYIFSRDCLEVRLRVKKTAFVTLFINH FKSKLALGANEEARNRERAAANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAM LEPEERWTHYWKAKNSVSQLDHVLLSPALAGKLKQNGITVERRGIGFRAESKKVDGGYLPRQVRVEAIEDDPDPLSIDFQ FERFKDVSSRNVASDHCAIFLKFAI >Mature_345_residues MLLCNFNVNNLFVRYKFGKTFPGDQGGKSRVTNPNVGYLPLYQKGAFEIFNAEQRKLAALAITQGNTVLPDVVCIQEVES LIALREFNERFLAAAYPYAVVLDSRDLRQIDVGILSKYPLDSVATHVDDTAAGKYIFSRDCLEVRLRVKKTAFVTLFINH FKSKLALGANEEARNRERAAANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAM LEPEERWTHYWKAKNSVSQLDHVLLSPALAGKLKQNGITVERRGIGFRAESKKVDGGYLPRQVRVEAIEDDPDPLSIDFQ FERFKDVSSRNVASDHCAIFLKFAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38664; Mature: 38664
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCNFNVNNLFVRYKFGKTFPGDQGGKSRVTNPNVGYLPLYQKGAFEIFNAEQRKLAAL CEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHEEEEE AITQGNTVLPDVVCIQEVESLIALREFNERFLAAAYPYAVVLDSRDLRQIDVGILSKYPL EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCH DSVATHVDDTAAGKYIFSRDCLEVRLRVKKTAFVTLFINHFKSKLALGANEEARNRERAA HHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAM HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LEPEERWTHYWKAKNSVSQLDHVLLSPALAGKLKQNGITVERRGIGFRAESKKVDGGYLP CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCC RQVRVEAIEDDPDPLSIDFQFERFKDVSSRNVASDHCAIFLKFAI CEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MLLCNFNVNNLFVRYKFGKTFPGDQGGKSRVTNPNVGYLPLYQKGAFEIFNAEQRKLAAL CEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHEEEEE AITQGNTVLPDVVCIQEVESLIALREFNERFLAAAYPYAVVLDSRDLRQIDVGILSKYPL EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCH DSVATHVDDTAAGKYIFSRDCLEVRLRVKKTAFVTLFINHFKSKLALGANEEARNRERAA HHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAM HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LEPEERWTHYWKAKNSVSQLDHVLLSPALAGKLKQNGITVERRGIGFRAESKKVDGGYLP CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCC RQVRVEAIEDDPDPLSIDFQFERFKDVSSRNVASDHCAIFLKFAI CEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA