Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787258

Identifier: 91787258

GI number: 91787258

Start: 1404204

End: 1404812

Strand: Reverse

Name: 91787258

Synonym: Bpro_1363

Alternate gene names: NA

Gene position: 1404812-1404204 (Counterclockwise)

Preceding gene: 91787259

Following gene: 91787256

Centisome position: 27.01

GC content: 59.61

Gene sequence:

>609_bases
ATGAGGCAAAGATATGTGTCCGCCGCGCGCCCCAATGTAAAGCGGCGAAACACCCTGCAAGCGTACTGGCCCGCGGGCAC
TTATTGGTGTTCAATGTTCATCAGGACTCGACCTGAACCTGGCCAACAACATTCAAAAAATCCAAAACATCCCAGACATC
AAACATTCAGCAGCCAACCCATGACCCTTAAGACCTTTAAGACCCTTACCGCCAAACCCTTCACCGCAAAACAGATCTCA
CGGCAAATGTCTTCGCGCGTCGTTCATGCGTCTCACCGGTCCTGGCTTTATGCCGGCGTCATGATGCTGACGCTGACCGC
TGCAGGCGCGCTGCTGGCCATGCGCGCGCAAGCCCAGACGCCCGAGCCTGCCGCAGCAGCCCCCGCGCAAGCGGCCCCCA
GCCCGGCGGCGGCACCCAAATACGCGGCCAAGGACATGGTTCGGGCCTTCAGCTACATGGATGCCAACAAGGATGGCAAG
GTCAGCCGCGAAGAAGCGGCCGGCTTTCGCGGCGTGGCCAGGCACTTTGACGAAGCCGACACCAGCCGCGACGGATTCCT
TTCAAGCGAGGAATTCGAAAGCGCACTGAACGGCAGAAAGCCCCAGTAG

Upstream 100 bases:

>100_bases
AAATTTGCGATCTGAGCTGCGGGCCACAAGAAGGCCACACTTCAGGTGCGGACAAGACTTCGTGGCAACATGGGCCGAAT
GAGGCGGGATGACGAGAGGT

Downstream 100 bases:

>100_bases
GGTCTGCCCGTTCAAGTTCCCGCTCCCGCTCCCGTTCACGTTCAAGTTCACATTCAAGACTTCACGGCCTCAACTCGTCC
TCACCGCGTCGACGGGCTCA

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRQRYVSAARPNVKRRNTLQAYWPAGTYWCSMFIRTRPEPGQQHSKNPKHPRHQTFSSQPMTLKTFKTLTAKPFTAKQIS
RQMSSRVVHASHRSWLYAGVMMLTLTAAGALLAMRAQAQTPEPAAAAPAQAAPSPAAAPKYAAKDMVRAFSYMDANKDGK
VSREEAAGFRGVARHFDEADTSRDGFLSSEEFESALNGRKPQ

Sequences:

>Translated_202_residues
MRQRYVSAARPNVKRRNTLQAYWPAGTYWCSMFIRTRPEPGQQHSKNPKHPRHQTFSSQPMTLKTFKTLTAKPFTAKQIS
RQMSSRVVHASHRSWLYAGVMMLTLTAAGALLAMRAQAQTPEPAAAAPAQAAPSPAAAPKYAAKDMVRAFSYMDANKDGK
VSREEAAGFRGVARHFDEADTSRDGFLSSEEFESALNGRKPQ
>Mature_202_residues
MRQRYVSAARPNVKRRNTLQAYWPAGTYWCSMFIRTRPEPGQQHSKNPKHPRHQTFSSQPMTLKTFKTLTAKPFTAKQIS
RQMSSRVVHASHRSWLYAGVMMLTLTAAGALLAMRAQAQTPEPAAAAPAQAAPSPAAAPKYAAKDMVRAFSYMDANKDGK
VSREEAAGFRGVARHFDEADTSRDGFLSSEEFESALNGRKPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22430; Mature: 22430

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRYVSAARPNVKRRNTLQAYWPAGTYWCSMFIRTRPEPGQQHSKNPKHPRHQTFSSQP
CCCCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
MTLKTFKTLTAKPFTAKQISRQMSSRVVHASHRSWLYAGVMMLTLTAAGALLAMRAQAQT
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEPAAAAPAQAAPSPAAAPKYAAKDMVRAFSYMDANKDGKVSREEAAGFRGVARHFDEAD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
TSRDGFLSSEEFESALNGRKPQ
CCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MRQRYVSAARPNVKRRNTLQAYWPAGTYWCSMFIRTRPEPGQQHSKNPKHPRHQTFSSQP
CCCCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
MTLKTFKTLTAKPFTAKQISRQMSSRVVHASHRSWLYAGVMMLTLTAAGALLAMRAQAQT
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEPAAAAPAQAAPSPAAAPKYAAKDMVRAFSYMDANKDGKVSREEAAGFRGVARHFDEAD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
TSRDGFLSSEEFESALNGRKPQ
CCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA