Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ureB

Identifier: 91787246

GI number: 91787246

Start: 1389142

End: 1389480

Strand: Reverse

Name: ureB

Synonym: Bpro_1351

Alternate gene names: 91787246

Gene position: 1389480-1389142 (Counterclockwise)

Preceding gene: 91787247

Following gene: 91787245

Centisome position: 26.72

GC content: 64.6

Gene sequence:

>339_bases
ATGACACCCGGCGAACTGTTTACCGACGGCCCCGACCACGTCCTCAACGCAGGGCGACGCACGCTGACACTGGTCGTGCA
AAACACCGCAGACCGGCCCATCCAGGTGGGTTCGCACTACCACTTTGCAGAAACCAATGCCGCACTGGGCTTTGACCGCC
AGGCGGCGCACGGCATGCGGCTGAATATTGCCTCCGGCACGGCCGTGCGCTTTGAGCCGGGCCAGCAGCGCACGGTGGAA
CTGGTGGACTATGCGGGCGAGCGCAAGGTGTTTGGCTTCCGGGGCCTGGTGCAGGGTGGCCTGGACGCATCCGGGCAGAG
TCACAAGGAAACGACGTAA

Upstream 100 bases:

>100_bases
CTGGGGGTTTCTGGCGGTTGCCGCGCTGACGGCGCTGGCCATCTGGATGTCCCGTGGCGGCAAATAAGCACAACAAGACA
CAACAACCCTTGAGGCAGCC

Downstream 100 bases:

>100_bases
TGGCAACCATTGGCAGACGCGCCTATGCGGAAATGTTTGGCCCCACCGCGGGTGACCGCCTGCGGCTGGCCGACACCGAC
CTGGTGGTGGAGGTGGAAGC

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVE
LVDYAGERKVFGFRGLVQGGLDASGQSHKETT

Sequences:

>Translated_112_residues
MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVE
LVDYAGERKVFGFRGLVQGGLDASGQSHKETT
>Mature_111_residues
TPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVEL
VDYAGERKVFGFRGLVQGGLDASGQSHKETT

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_POLSJ (Q12DU2)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_548198.1
- ProteinModelPortal:   Q12DU2
- SMR:   Q12DU2
- STRING:   Q12DU2
- GeneID:   4011962
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1351
- NMPDR:   fig|296591.1.peg.1907
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   RIVYGFN
- ProtClustDB:   PRK13203
- BioCyc:   PSP296591:BPRO_1351-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 12122; Mature: 11990

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMR
CCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCEE
LNIASGTAVRFEPGQQRTVELVDYAGERKVFGFRGLVQGGLDASGQSHKETT
EEECCCCEEEECCCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMR
CCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCEE
LNIASGTAVRFEPGQQRTVELVDYAGERKVFGFRGLVQGGLDASGQSHKETT
EEECCCCEEEECCCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA