Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ureC [H]

Identifier: 91787245

GI number: 91787245

Start: 1387424

End: 1389142

Strand: Reverse

Name: ureC [H]

Synonym: Bpro_1350

Alternate gene names: 91787245

Gene position: 1389142-1387424 (Counterclockwise)

Preceding gene: 91787246

Following gene: 91787244

Centisome position: 26.71

GC content: 63.64

Gene sequence:

>1719_bases
ATGGCAACCATTGGCAGACGCGCCTATGCGGAAATGTTTGGCCCCACCGCGGGTGACCGCCTGCGGCTGGCCGACACCGA
CCTGGTGGTGGAGGTGGAAGCCGACTACACGCTGCGCGCCGGCAGCTACGGCGAAGAAGTGAAATTCGGCGGCGGCAAGA
CCATTCGCGACGGCATGGCGCAGTCGCAAAAAACCCGCGCCGAAGGGGCGATGGACACGGTGATGACCAACGCCCTCATC
ATGGACCACTGGGGCATCGTCAAGGCCGATATCGGCCTCAAAGGCGGCCGCATCGCCGTCATTGGCAAGGCCGGCAACCC
CGACACCCAACCCGGCGTGGACATGATCATTGGCCCCGGTACCGAGATCATCAGCTGCGAAGGCATGATCGTCACCGCCG
GCGGCATCGACTCGCACATCCACTTCATTTGCCCGCAGCAGATTGAAGAAGCCCTCACCTCGGGCGTGACGACCATGCTG
GGCGGCGGCACCGGCCCGGCCACCGGCACCTTTGCCACCACTTGCACACCCGGCCCCTGGAACATCGAGCGCATGCTGCA
GGCGGCGGACGCCTTCCCGATGAACCTGGGCTTTCTGGGCAAGGGCAACGCCAGCCTGCCCGCCGCGCTGCACGAGCAGA
TCAACGCCGGCGTGATTGGCCTGAAGCTGCATGAAGACTGGGGCACCACGCCGGCCGCCATCAGCAACTGCCTGGATGTG
GCAGAAGAAACCGACACGCAGGTGGCGATTCACAGCGACACGCTCAATGAATCGGGCTTTGTCGAAAACACGATTGCCGC
CACCAAGGGCCGCACGCTCTGCGCCTTTCACACCGAAGGCGCCGGCGGCGGCCATGCGCCCGATATTTTGCGGGTGGTCG
GCGAGCAGAACTTTTTGCCGTCTTCCACCAACCCGACCATGCCCTACACGGTCAACACGCTGGACGAGCATGTCGACATG
CTGATGGTGTGCCACCACCTCGACGCGGGCATTGCCGAAGACCTGGCCTTTGCCGAAAGCCGCATCCGCAAGGAAACCAT
CGCGGCGGAAGACATCCTGCACGACCTGGGCGCGATCAGCATGTTCAGCTCCGACAGCCAGGCCATGGGCCGGGTTGGCG
AAGTCATCATCCGCACCTGGCAGACCGCGCACAAGATGAAGCAGCAGCGCGGCAAACTGCCCGGCGACAGCGACCGCCAC
GACAACTTCCGCGCCAAGCGCTACATCAGCAAATACACCATCAACCCGGCCATCGCGCACGGTATCTCGCATGAGGTGGG
CTCGGTTGAACCGGGCAAATGGGCCGACCTGGTGGTGTGGAAGCCGGCGTTTTTTGGCATCAAGCCGTCCGTCATCCTCA
AGGGCGGCTTCATCGCGATGGCGGCCATGGGCGACCCGAATGCGTCGATACCTACGCCGCAGCCGGTGCATTACCGCCCC
ATGTTTGGCGGCTTTGGCGGCGCCATTGCCAAAGGCTCCCTCACTTTCGTGTCGCAGGCCGGGCTCAATGCGGACATCCA
GAAACGTTTCGGGCTGGCCAAAACGCTCAGCGCCGTCAAGAACATCCGCGGGGTGCGCAAGCAGCACATGATCCACAACG
ACTATGCGCCGAAAATGGAAGTCGATGCCCAGACTTACCTGGTGCGCGCCGACGGGCTGCTGCTGACCTGCGAACCGGCA
GTCAGCCTGCCGATGACGCAGCGCTACTTCCTGTTCTGA

Upstream 100 bases:

>100_bases
AACTGGTGGACTATGCGGGCGAGCGCAAGGTGTTTGGCTTCCGGGGCCTGGTGCAGGGTGGCCTGGACGCATCCGGGCAG
AGTCACAAGGAAACGACGTA

Downstream 100 bases:

>100_bases
CCAACGAGTCATGGCCGCCCGGGCCAGCCGCTGGGTGGGTGTGCTGCGTTCAACCCTTGTTTACGCAGGGCTTGCCGCGC
TGGCATACTCGTTTTTTTAA

Product: urease subunit alpha

Products: NA

Alternate protein names: Urea amidohydrolase subunit alpha [H]

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MATIGRRAYAEMFGPTAGDRLRLADTDLVVEVEADYTLRAGSYGEEVKFGGGKTIRDGMAQSQKTRAEGAMDTVMTNALI
MDHWGIVKADIGLKGGRIAVIGKAGNPDTQPGVDMIIGPGTEIISCEGMIVTAGGIDSHIHFICPQQIEEALTSGVTTML
GGGTGPATGTFATTCTPGPWNIERMLQAADAFPMNLGFLGKGNASLPAALHEQINAGVIGLKLHEDWGTTPAAISNCLDV
AEETDTQVAIHSDTLNESGFVENTIAATKGRTLCAFHTEGAGGGHAPDILRVVGEQNFLPSSTNPTMPYTVNTLDEHVDM
LMVCHHLDAGIAEDLAFAESRIRKETIAAEDILHDLGAISMFSSDSQAMGRVGEVIIRTWQTAHKMKQQRGKLPGDSDRH
DNFRAKRYISKYTINPAIAHGISHEVGSVEPGKWADLVVWKPAFFGIKPSVILKGGFIAMAAMGDPNASIPTPQPVHYRP
MFGGFGGAIAKGSLTFVSQAGLNADIQKRFGLAKTLSAVKNIRGVRKQHMIHNDYAPKMEVDAQTYLVRADGLLLTCEPA
VSLPMTQRYFLF

Sequences:

>Translated_572_residues
MATIGRRAYAEMFGPTAGDRLRLADTDLVVEVEADYTLRAGSYGEEVKFGGGKTIRDGMAQSQKTRAEGAMDTVMTNALI
MDHWGIVKADIGLKGGRIAVIGKAGNPDTQPGVDMIIGPGTEIISCEGMIVTAGGIDSHIHFICPQQIEEALTSGVTTML
GGGTGPATGTFATTCTPGPWNIERMLQAADAFPMNLGFLGKGNASLPAALHEQINAGVIGLKLHEDWGTTPAAISNCLDV
AEETDTQVAIHSDTLNESGFVENTIAATKGRTLCAFHTEGAGGGHAPDILRVVGEQNFLPSSTNPTMPYTVNTLDEHVDM
LMVCHHLDAGIAEDLAFAESRIRKETIAAEDILHDLGAISMFSSDSQAMGRVGEVIIRTWQTAHKMKQQRGKLPGDSDRH
DNFRAKRYISKYTINPAIAHGISHEVGSVEPGKWADLVVWKPAFFGIKPSVILKGGFIAMAAMGDPNASIPTPQPVHYRP
MFGGFGGAIAKGSLTFVSQAGLNADIQKRFGLAKTLSAVKNIRGVRKQHMIHNDYAPKMEVDAQTYLVRADGLLLTCEPA
VSLPMTQRYFLF
>Mature_571_residues
ATIGRRAYAEMFGPTAGDRLRLADTDLVVEVEADYTLRAGSYGEEVKFGGGKTIRDGMAQSQKTRAEGAMDTVMTNALIM
DHWGIVKADIGLKGGRIAVIGKAGNPDTQPGVDMIIGPGTEIISCEGMIVTAGGIDSHIHFICPQQIEEALTSGVTTMLG
GGTGPATGTFATTCTPGPWNIERMLQAADAFPMNLGFLGKGNASLPAALHEQINAGVIGLKLHEDWGTTPAAISNCLDVA
EETDTQVAIHSDTLNESGFVENTIAATKGRTLCAFHTEGAGGGHAPDILRVVGEQNFLPSSTNPTMPYTVNTLDEHVDML
MVCHHLDAGIAEDLAFAESRIRKETIAAEDILHDLGAISMFSSDSQAMGRVGEVIIRTWQTAHKMKQQRGKLPGDSDRHD
NFRAKRYISKYTINPAIAHGISHEVGSVEPGKWADLVVWKPAFFGIKPSVILKGGFIAMAAMGDPNASIPTPQPVHYRPM
FGGFGGAIAKGSLTFVSQAGLNADIQKRFGLAKTLSAVKNIRGVRKQHMIHNDYAPKMEVDAQTYLVRADGLLLTCEPAV
SLPMTQRYFLF

Specific function: Unknown

COG id: COG0804

COG function: function code E; Urea amidohydrolase (urease) alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 urease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR011612
- InterPro:   IPR005848
- InterPro:   IPR017951
- InterPro:   IPR017950 [H]

Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 61170; Mature: 61038

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01120 UREASE_1 ; PS00145 UREASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIGRRAYAEMFGPTAGDRLRLADTDLVVEVEADYTLRAGSYGEEVKFGGGKTIRDGMA
CCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCEEEECCCCCCEEEECCCCHHHHHHH
QSQKTRAEGAMDTVMTNALIMDHWGIVKADIGLKGGRIAVIGKAGNPDTQPGVDMIIGPG
HHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCC
TEIISCEGMIVTAGGIDSHIHFICPQQIEEALTSGVTTMLGGGTGPATGTFATTCTPGPW
CCEEEECCEEEEECCCCCCEEEECHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCC
NIERMLQAADAFPMNLGFLGKGNASLPAALHEQINAGVIGLKLHEDWGTTPAAISNCLDV
CHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
AEETDTQVAIHSDTLNESGFVENTIAATKGRTLCAFHTEGAGGGHAPDILRVVGEQNFLP
HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCC
SSTNPTMPYTVNTLDEHVDMLMVCHHLDAGIAEDLAFAESRIRKETIAAEDILHDLGAIS
CCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFSSDSQAMGRVGEVIIRTWQTAHKMKQQRGKLPGDSDRHDNFRAKRYISKYTINPAIAH
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCHHHHH
GISHEVGSVEPGKWADLVVWKPAFFGIKPSVILKGGFIAMAAMGDPNASIPTPQPVHYRP
CCCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCEECC
MFGGFGGAIAKGSLTFVSQAGLNADIQKRFGLAKTLSAVKNIRGVRKQHMIHNDYAPKME
CCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VDAQTYLVRADGLLLTCEPAVSLPMTQRYFLF
ECCEEEEEEECCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATIGRRAYAEMFGPTAGDRLRLADTDLVVEVEADYTLRAGSYGEEVKFGGGKTIRDGMA
CCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCEEEECCCCCCEEEECCCCHHHHHHH
QSQKTRAEGAMDTVMTNALIMDHWGIVKADIGLKGGRIAVIGKAGNPDTQPGVDMIIGPG
HHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCC
TEIISCEGMIVTAGGIDSHIHFICPQQIEEALTSGVTTMLGGGTGPATGTFATTCTPGPW
CCEEEECCEEEEECCCCCCEEEECHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCC
NIERMLQAADAFPMNLGFLGKGNASLPAALHEQINAGVIGLKLHEDWGTTPAAISNCLDV
CHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
AEETDTQVAIHSDTLNESGFVENTIAATKGRTLCAFHTEGAGGGHAPDILRVVGEQNFLP
HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCC
SSTNPTMPYTVNTLDEHVDMLMVCHHLDAGIAEDLAFAESRIRKETIAAEDILHDLGAIS
CCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFSSDSQAMGRVGEVIIRTWQTAHKMKQQRGKLPGDSDRHDNFRAKRYISKYTINPAIAH
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCHHHHH
GISHEVGSVEPGKWADLVVWKPAFFGIKPSVILKGGFIAMAAMGDPNASIPTPQPVHYRP
CCCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCEECC
MFGGFGGAIAKGSLTFVSQAGLNADIQKRFGLAKTLSAVKNIRGVRKQHMIHNDYAPKME
CCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VDAQTYLVRADGLLLTCEPAVSLPMTQRYFLF
ECCEEEEEEECCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA