Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787214

Identifier: 91787214

GI number: 91787214

Start: 1357800

End: 1359173

Strand: Reverse

Name: 91787214

Synonym: Bpro_1318

Alternate gene names: NA

Gene position: 1359173-1357800 (Counterclockwise)

Preceding gene: 91787215

Following gene: 91787213

Centisome position: 26.14

GC content: 64.77

Gene sequence:

>1374_bases
ATGACAACCTGGACGATCAAGACGGTCGATGCAGCGATCCGCAAGGCGAAGAAGGACGAGTGCGATGTGTGGCTCACCGA
GGCGCGCCCGCGTGGCGAAGGCAGGCTGCGGCTGCGTGCGCGACCGGGTGGTCATGTCCTCTTCTACTTCCGCTACTCGT
GTGAAGGCACACAGCACCAGCTCGACCTTGGCACTTACGACGAGAGCGGTCGCGCCGGCCTCACGCTCGGCGCCGCGCGC
GCGAGCGCGGGAGAGCTGTCAAGGCTTTACCAGAGCGGCGTGCGCAATCTGCACAGCCATCTGGCACACGAGCGCGCTGC
GCAGCGGGCACTGATCGAAGCCGCAGCCGCAAAGCGCAGGGAAGATGAAAAACAGGCTACGGCCGGTTCGCTGCAGGCGC
TGCTCAAGGGCTACACGCAGCACCTGGAGCGACAGGGCAAGATGTCGGCCAAGGAAGTGGGCAACCTGTTCAAGCTTCAC
GTGTTCGAGGCACATCCGCAACTCACCGCAAAGCGCGCGTCGGAAGTCGTGCAGCAAGACGTGAGCGCCACCCTGGCCGG
GTTGATCAACCAGGGTAAGGGACGCACGGCCGCGAAACTGCGCAGTTATCTTTCCGCAGCATTCACAGCGGGCTTGCAAG
CCGAAGGCGACCCGACAATCCATCCATCGCTGCACGGCTTTGCCCTCAAGATGAATCCGGCCGCACTGGTGCCGGCGAAG
TCGCTCAGACAGTTCAATCGGGAGCGCGAGCGGGCGCTGAACGAGGACGAGCTGCGCGTCTTCCTGAAGGCGCTCGACGA
GCGGCCGGGCCTTGCCACCGACGCGATCAGGCTCACGCTTTACCTGGGCGGGCAACGCCTGGCACAACTGCTGCGGCTCA
AGCCCGCGCAGTTTGATCCGGATGGCCCTGCTGTCACGCTGCTCGACCCCAAGGGGAAACGTCTGCAGCCACGGCTGCAT
GTGCTCCCGCTGACCGACCCCGCCCTGGCAATCGTCGAGCGCCTGATGCAGGCGAACGCCGACCATAAGTACCTGATCAG
CAGCCGGGGCAAGGTGCCGGTGCGCGTCGAGACATTGAGCAAGCGGGTCCACGAAATCAGCACGGCCATGGTGAAAGCGA
AGAAGGCACGTGCACCGTTCCAGATGTGCGATCTGCGCAGGACATGCGAGACGATGCTGGCCCGCATGGGCGTGTCACGC
GACACGCGCGCCCAACTGCTGAGCCACGGCCTCAGCGGTGTTCAGCAAAAGCACTACGACCGCTACGACTACATGCCCGA
GAAGCAGCGCACGCTGAAAGCCTGGGCGCGAAAGCTCGATGCGATTGCGAAGGGCGAGGCGCCGGGCAAGGTCGTGCCGC
TGCGGAGGGGGTGA

Upstream 100 bases:

>100_bases
GTCTGTCCATCTGTGACCAGCGGTCATACAGACACCATACAGACACCAGACAGACACCAGCGCAACCAAAGGACTGCGAA
CAGACACGAAGGGGAAGGTC

Downstream 100 bases:

>100_bases
GCCATGAAGCCCGTCAAGAAAACATTGCTCGACACCGAGCCTGAGCCGAGCGACGCCGAGCGCGTTGACGCGTTCCTGGA
GGGGCTGAAGGAAAAGCGGC

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase; Phage-Related Integrase; Phage Integrase Family Protein; Integrase/Recombinase Phage Integrase; Integrase Protein; Phage Integrase/Recombinase Protein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTTWTIKTVDAAIRKAKKDECDVWLTEARPRGEGRLRLRARPGGHVLFYFRYSCEGTQHQLDLGTYDESGRAGLTLGAAR
ASAGELSRLYQSGVRNLHSHLAHERAAQRALIEAAAAKRREDEKQATAGSLQALLKGYTQHLERQGKMSAKEVGNLFKLH
VFEAHPQLTAKRASEVVQQDVSATLAGLINQGKGRTAAKLRSYLSAAFTAGLQAEGDPTIHPSLHGFALKMNPAALVPAK
SLRQFNRERERALNEDELRVFLKALDERPGLATDAIRLTLYLGGQRLAQLLRLKPAQFDPDGPAVTLLDPKGKRLQPRLH
VLPLTDPALAIVERLMQANADHKYLISSRGKVPVRVETLSKRVHEISTAMVKAKKARAPFQMCDLRRTCETMLARMGVSR
DTRAQLLSHGLSGVQQKHYDRYDYMPEKQRTLKAWARKLDAIAKGEAPGKVVPLRRG

Sequences:

>Translated_457_residues
MTTWTIKTVDAAIRKAKKDECDVWLTEARPRGEGRLRLRARPGGHVLFYFRYSCEGTQHQLDLGTYDESGRAGLTLGAAR
ASAGELSRLYQSGVRNLHSHLAHERAAQRALIEAAAAKRREDEKQATAGSLQALLKGYTQHLERQGKMSAKEVGNLFKLH
VFEAHPQLTAKRASEVVQQDVSATLAGLINQGKGRTAAKLRSYLSAAFTAGLQAEGDPTIHPSLHGFALKMNPAALVPAK
SLRQFNRERERALNEDELRVFLKALDERPGLATDAIRLTLYLGGQRLAQLLRLKPAQFDPDGPAVTLLDPKGKRLQPRLH
VLPLTDPALAIVERLMQANADHKYLISSRGKVPVRVETLSKRVHEISTAMVKAKKARAPFQMCDLRRTCETMLARMGVSR
DTRAQLLSHGLSGVQQKHYDRYDYMPEKQRTLKAWARKLDAIAKGEAPGKVVPLRRG
>Mature_456_residues
TTWTIKTVDAAIRKAKKDECDVWLTEARPRGEGRLRLRARPGGHVLFYFRYSCEGTQHQLDLGTYDESGRAGLTLGAARA
SAGELSRLYQSGVRNLHSHLAHERAAQRALIEAAAAKRREDEKQATAGSLQALLKGYTQHLERQGKMSAKEVGNLFKLHV
FEAHPQLTAKRASEVVQQDVSATLAGLINQGKGRTAAKLRSYLSAAFTAGLQAEGDPTIHPSLHGFALKMNPAALVPAKS
LRQFNRERERALNEDELRVFLKALDERPGLATDAIRLTLYLGGQRLAQLLRLKPAQFDPDGPAVTLLDPKGKRLQPRLHV
LPLTDPALAIVERLMQANADHKYLISSRGKVPVRVETLSKRVHEISTAMVKAKKARAPFQMCDLRRTCETMLARMGVSRD
TRAQLLSHGLSGVQQKHYDRYDYMPEKQRTLKAWARKLDAIAKGEAPGKVVPLRRG

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50763; Mature: 50632

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS01204 REL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWTIKTVDAAIRKAKKDECDVWLTEARPRGEGRLRLRARPGGHVLFYFRYSCEGTQHQ
CCEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEE
LDLGTYDESGRAGLTLGAARASAGELSRLYQSGVRNLHSHLAHERAAQRALIEAAAAKRR
EECCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDEKQATAGSLQALLKGYTQHLERQGKMSAKEVGNLFKLHVFEAHPQLTAKRASEVVQQD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHHHH
VSATLAGLINQGKGRTAAKLRSYLSAAFTAGLQAEGDPTIHPSLHGFALKMNPAALVPAK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHCCHH
SLRQFNRERERALNEDELRVFLKALDERPGLATDAIRLTLYLGGQRLAQLLRLKPAQFDP
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEECHHHHHHHHHCCCCCCCC
DGPAVTLLDPKGKRLQPRLHVLPLTDPALAIVERLMQANADHKYLISSRGKVPVRVETLS
CCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEHHHHH
KRVHEISTAMVKAKKARAPFQMCDLRRTCETMLARMGVSRDTRAQLLSHGLSGVQQKHYD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RYDYMPEKQRTLKAWARKLDAIAKGEAPGKVVPLRRG
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCC
>Mature Secondary Structure 
TTWTIKTVDAAIRKAKKDECDVWLTEARPRGEGRLRLRARPGGHVLFYFRYSCEGTQHQ
CEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEE
LDLGTYDESGRAGLTLGAARASAGELSRLYQSGVRNLHSHLAHERAAQRALIEAAAAKRR
EECCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDEKQATAGSLQALLKGYTQHLERQGKMSAKEVGNLFKLHVFEAHPQLTAKRASEVVQQD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHHHH
VSATLAGLINQGKGRTAAKLRSYLSAAFTAGLQAEGDPTIHPSLHGFALKMNPAALVPAK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHCCHH
SLRQFNRERERALNEDELRVFLKALDERPGLATDAIRLTLYLGGQRLAQLLRLKPAQFDP
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEECHHHHHHHHHCCCCCCCC
DGPAVTLLDPKGKRLQPRLHVLPLTDPALAIVERLMQANADHKYLISSRGKVPVRVETLS
CCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEHHHHH
KRVHEISTAMVKAKKARAPFQMCDLRRTCETMLARMGVSRDTRAQLLSHGLSGVQQKHYD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RYDYMPEKQRTLKAWARKLDAIAKGEAPGKVVPLRRG
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA