| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787215
Identifier: 91787215
GI number: 91787215
Start: 1359537
End: 1360397
Strand: Reverse
Name: 91787215
Synonym: Bpro_1319
Alternate gene names: NA
Gene position: 1360397-1359537 (Counterclockwise)
Preceding gene: 91787216
Following gene: 91787214
Centisome position: 26.16
GC content: 57.84
Gene sequence:
>861_bases ATGCGTCACGTCAGCCGGTTGGAGGCGCCGCTAAAGGCATTCGCTGCTCTCACAATCTTTTCCGCCTCGGCGGTAACCTT ATGGACGGCGTCAGCCTTCTTGAGCACTCCGGCCTTTGCGCAGCGCGAGGCCGCAAGTACCTTTGCGTTGCCTGAAGAAC TCAAACCTGTGTTGTCAGAACAAGTCTCCAGAAAGCTTCTGGATTCAACGAAGCTTTCGGGCATCCGTCCAAAGATGGGC TACCGCGGAACCCTTGAAGGTGTCCTGACCATGGTGTCAATGTCCGCCAAGCGTTCACGGGAGTACGAATGCACGGTGAC CTCCGGCGGCTTCAATCTTTGCGCGGTAGCGACGACACGACATGACAGCACGTCCGGGAAGCAGCAGGAACTGACGGCGC TGGCAGGCCTCCTTCGCGTGGCTGTCGCCACGACCGACGAGGACAAACCTCCGCTCTATGCCCATGTGCTTACCGACTTT TCCATCAACGGCAATCTGCGGACTTTGGAGACGGTGGGGAACCGGCTGTCGCTTCAGGAAAGTTATATCTCCAGCATTCT TGTCGACGACAAGCTGGAAAGTATCGAATGGGAAGAAAGCAAGGTTTGCATCAACCGGGGCGCCAGGGCGGTTCCCGAGG AATGGACGCCCTTTGGGTTGGCGTATACCTACGATTGCAAGTCCGTGGGGCAACGCAAAGAGCCCCATGTTTCACCGTCC ATCAGACGGAACTTCGAACTGGTCTTCCTGTCGCGCGGCCGAAGGTTTGTGGAACCGTTCGTGGTGGATGTGAACGAGAG TCCCTCCGTGATATTCGCCCGCACCTCGCGCTCGGGTTTTACCCCCTCCTGGGCGAAGTAG
Upstream 100 bases:
>100_bases CCGGGAACGACGAACTTCAGAGTAATATTTAAATGGTAATGCCGCAACACTTAGAAGTTGGAAGTTAGAAGTCTGCGGCT CCGACTTTGAGGGTACTCCT
Downstream 100 bases:
>100_bases ACGAGCAACCGAAACCTGGCTCGCGCGATATCCAGTTTTGTAGAAACAAACCCTGCTTGTAGAAACGCCCCAGACCCGAA ACCGGGGCTGAGGCGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRHVSRLEAPLKAFAALTIFSASAVTLWTASAFLSTPAFAQREAASTFALPEELKPVLSEQVSRKLLDSTKLSGIRPKMG YRGTLEGVLTMVSMSAKRSREYECTVTSGGFNLCAVATTRHDSTSGKQQELTALAGLLRVAVATTDEDKPPLYAHVLTDF SINGNLRTLETVGNRLSLQESYISSILVDDKLESIEWEESKVCINRGARAVPEEWTPFGLAYTYDCKSVGQRKEPHVSPS IRRNFELVFLSRGRRFVEPFVVDVNESPSVIFARTSRSGFTPSWAK
Sequences:
>Translated_286_residues MRHVSRLEAPLKAFAALTIFSASAVTLWTASAFLSTPAFAQREAASTFALPEELKPVLSEQVSRKLLDSTKLSGIRPKMG YRGTLEGVLTMVSMSAKRSREYECTVTSGGFNLCAVATTRHDSTSGKQQELTALAGLLRVAVATTDEDKPPLYAHVLTDF SINGNLRTLETVGNRLSLQESYISSILVDDKLESIEWEESKVCINRGARAVPEEWTPFGLAYTYDCKSVGQRKEPHVSPS IRRNFELVFLSRGRRFVEPFVVDVNESPSVIFARTSRSGFTPSWAK >Mature_286_residues MRHVSRLEAPLKAFAALTIFSASAVTLWTASAFLSTPAFAQREAASTFALPEELKPVLSEQVSRKLLDSTKLSGIRPKMG YRGTLEGVLTMVSMSAKRSREYECTVTSGGFNLCAVATTRHDSTSGKQQELTALAGLLRVAVATTDEDKPPLYAHVLTDF SINGNLRTLETVGNRLSLQESYISSILVDDKLESIEWEESKVCINRGARAVPEEWTPFGLAYTYDCKSVGQRKEPHVSPS IRRNFELVFLSRGRRFVEPFVVDVNESPSVIFARTSRSGFTPSWAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31590; Mature: 31590
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVSRLEAPLKAFAALTIFSASAVTLWTASAFLSTPAFAQREAASTFALPEELKPVLSE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH QVSRKLLDSTKLSGIRPKMGYRGTLEGVLTMVSMSAKRSREYECTVTSGGFNLCAVATTR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEC HDSTSGKQQELTALAGLLRVAVATTDEDKPPLYAHVLTDFSINGNLRTLETVGNRLSLQE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEHHHHCCHHHHHH SYISSILVDDKLESIEWEESKVCINRGARAVPEEWTPFGLAYTYDCKSVGQRKEPHVSPS HHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCHH IRRNFELVFLSRGRRFVEPFVVDVNESPSVIFARTSRSGFTPSWAK HHCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MRHVSRLEAPLKAFAALTIFSASAVTLWTASAFLSTPAFAQREAASTFALPEELKPVLSE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH QVSRKLLDSTKLSGIRPKMGYRGTLEGVLTMVSMSAKRSREYECTVTSGGFNLCAVATTR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEC HDSTSGKQQELTALAGLLRVAVATTDEDKPPLYAHVLTDFSINGNLRTLETVGNRLSLQE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEHHHHCCHHHHHH SYISSILVDDKLESIEWEESKVCINRGARAVPEEWTPFGLAYTYDCKSVGQRKEPHVSPS HHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCHH IRRNFELVFLSRGRRFVEPFVVDVNESPSVIFARTSRSGFTPSWAK HHCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA